Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mre11a

Gene Name Gene ID Reads Annotation
mre11a ENSDARG00000105014 278 MRE11 homolog A, double strand break repair nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-2638]










Genes with expression patterns similar to mre11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mre11a ENSDARG00000105014 278 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MRE11 homolog A, double strand break repair nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-2638]
2. CABZ01067657.1 ENSDARG00000117241 245 1.617 - 0.728 - - - 0.889 - - -
3. kifap3a ENSDARG00000008639 721 1.597 - 0.812 - - - - - 0.785 - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
4. si:ch73-256j6.5 ENSDARG00000092732 65 1.584 - - - - - 0.767 0.817 - - si:ch73-256j6.5 [Source:ZFIN;Acc:ZDB-GENE-070705-225]
5. KCNAB1 KCNAB1 918 1.536 - 0.757 - - - - - 0.779 -
6. slmapa ENSDARG00000054458 966 1.498 - - - - - 0.772 - 0.726 - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
7. rcbtb2 ENSDARG00000090687 1658 1.428 - 0.714 - - - - 0.714 - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
8. TBC1D10B ENSDARG00000078604, ENSDARG00000114712 453 1.418 - 0.705 - - - - - 0.713 - TBC1 domain family, member 10b [Source:ZFIN;Acc:ZDB-GENE-030131-7754]
9. upk3l upk3l 61 0.949 - - - - - 0.949 - - -
10. soat1 ENSDARG00000062297 71 0.942 - - - - - 0.942 - - - sterol O-acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-177]
11. BAD BAD 1322 0.941 - - - - - 0.941 - - -
12. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.939 - - - - - 0.939 - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
13. dnmt3aa ENSDARG00000005394 63 0.939 - 0.939 - - - - - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
14. il6r ENSDARG00000104474 150 0.912 - - - - - 0.912 - - - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
15. sphk2 ENSDARG00000069893 1518 0.912 - - - - - 0.912 - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
16. CABZ01030094.1 CABZ01030094.1 98 0.908 - - - - - 0.908 - - -
17. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.905 - - - - - 0.905 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
18. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.903 - - - - - 0.903 - - - wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
19. uncx4.1 ENSDARG00000037760 472 0.9 - 0.900 - - - - - - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
20. pttg1 ENSDARG00000075421 166 0.898 - 0.898 - - - - - - - pituitary tumor-transforming 1 [Source:ZFIN;Acc:ZDB-GENE-081104-345]
21. gpx3 ENSDARG00000043342 101 0.894 - - - - - 0.894 - - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
22. tnfsf13b ENSDARG00000012945 54 0.894 - - - - - 0.894 - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
23. sdcbp ENSDARG00000030097 196 0.891 - 0.891 - - - - - - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
24. chga ENSDARG00000008829 1086 0.888 - 0.888 - - - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
25. LRRC10B 94 0.885 - 0.885 - - - - - - - leucine rich repeat containing 10B
26. strumpellin 212 0.883 - - - - - 0.883 - - - strumpellin
27. RBBP8NL RBBP8NL 813 0.883 - - - - - 0.883 - - -
28. MED8 ENSDARG00000114425 459 0.882 - - - - - 0.882 - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
29. BICC1 BICC1 264 0.88 - - - - - - - 0.880 -
30. asl ENSDARG00000033361 295 0.88 - - - - - - - 0.880 - argininosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1152]
31. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 0.879 - - - - - 0.879 - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
32. rnf170 ENSDARG00000104069 838 0.875 - - - - - 0.875 - - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
33. si:ch211-92l17.1 ENSDARG00000094584 18 0.875 - 0.875 - - - - - - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
34. serpina10a ENSDARG00000005924 1177 0.871 - - - - - 0.871 - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
35. ncaldb ENSDARG00000011334 123 0.871 - - - - - 0.871 - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
36. cep76 ENSDARG00000058319 143 0.869 - - - - - - - 0.869 - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
37. CR384059.2 CR384059.2 139 0.869 - - - - - - - 0.869 -
38. st3gal3b ENSDARG00000015252 465 0.867 - - - - - 0.867 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
39. btbd2 btbd2 1296 0.866 - - - - - - - 0.866 -
40. mylka ENSDARG00000034801 133 0.865 - 0.865 - - - - - - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
41. mpnd ENSDARG00000061989 817 0.865 0.865 - - - - - - - - MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
42. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.863 - - - - - - - 0.863 - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
43. acot11b ENSDARG00000042122 235 0.861 - - - - - 0.861 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
44. fkbp10a ENSDARG00000099183 314 0.859 - 0.859 - - - - - - - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
45. si:ch211-209a2.1 250 0.859 - - - - - 0.859 - - - si:ch211-209a2.1, transcript variant X2
46. esrrd ENSDARG00000015064 291 0.858 - - - - - 0.858 - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
47. nrg1 ENSDARG00000104314 1081 0.858 - - - - - - - 0.858 - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
48. vac14 ENSDARG00000014303 941 0.857 - - - - - - - 0.857 - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
49. si:dkey-19a16.7 ENSDARG00000071644 460 0.856 - - - - - - - 0.856 - si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
50. si:dkey-15h8.16 ENSDARG00000098613 187 0.856 - 0.856 - - - - - - - si:dkey-15h8.16 [Source:ZFIN;Acc:ZDB-GENE-050208-707]
51. si:ch211-126i22.5 ENSDARG00000060911 209 0.853 - 0.853 - - - - - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
52. bora ENSDARG00000042688, ENSDARG00000112916 402 0.852 - - - - - - - 0.852 - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
53. polr3k ENSDARG00000037835 1552 0.852 - 0.852 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
54. cecr1a 836 0.849 - - - - - - - 0.849 - cat eye syndrome chromosome region, candidate 1a
55. si:ch211-286m4.1 si:ch211-286m4.1 47 0.849 - 0.849 - - - - - - -
56. smtnb ENSDARG00000059442 474 0.848 - - - - - - - 0.848 - smoothelin b [Source:ZFIN;Acc:ZDB-GENE-070912-2]
57. dak dak 139 0.847 - - - - - 0.847 - - -
58. fam92a1 ENSDARG00000004436 658 0.847 - - - - - 0.847 - - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
59. PEG3_38 PEG3_38 521 0.847 - - - - - 0.847 - - -
60. si:dkey-30j22.3 si:dkey-30j22.3 17 0.846 - 0.846 - - - - - - -
61. galnt8b galnt8b 77 0.846 - - - - - 0.846 - - -
62. ZNF70_6 ZNF70_6 15 0.846 - 0.846 - - - - - - -
63. tmem63a ENSDARG00000031956 112 0.844 - - - - - 0.844 - - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
64. mtrf1l ENSDARG00000060005 177 0.844 - 0.844 - - - - - - - mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
65. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.844 - - - - - - 0.844 - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
66. zgc:154075 ENSDARG00000067630 284 0.844 - - - - - 0.844 - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
67. ZNF740 ZNF740 676 0.843 - - - - - - - 0.843 -
68. sox18 ENSDARG00000058598 678 0.841 - 0.841 - - - - - - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
69. obscn obscn 146 0.841 - - - - - 0.841 - - -
70. gabpb2b ENSDARG00000054344, ENSDARG00000109958 238 0.841 - 0.841 - - - - - - - GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]
71. si:dkey-19e4.5 ENSDARG00000089886 2562 0.84 0.840 - - - - - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
72. WDR70 ENSDARG00000109022 265 0.84 - 0.840 - - - - - - - WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
73. hmx3 hmx3 510 0.84 0.840 - - - - - - - -
74. znf511 ENSDARG00000000760 446 0.839 - - - - - 0.839 - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
75. RAB19 83 0.839 - 0.839 - - - - - - - RAB19, member RAS oncogene family
76. yipf1 ENSDARG00000014474 542 0.839 - - - - - - - 0.839 - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
77. IQUB ENSDARG00000061899 91 0.839 - 0.839 - - - - - - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
78. stambpb ENSDARG00000086906 265 0.838 - - - - - - - 0.838 - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
79. EGFR_2 EGFR_2 71 0.838 - - - - - 0.838 - - -
80. zgc:198419 ENSDARG00000076221 156 0.837 - - - - - 0.837 - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
81. ftsjd1 ftsjd1 137 0.836 - - - - - - - 0.836 -
82. DLGAP4 DLGAP4 443 0.835 - - - - - - - 0.835 -
83. swap70b ENSDARG00000057286, ENSDARG00000109359, ENSDARG00000110820 292 0.835 - - - - - 0.835 - - - switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]
84. tecpr2 ENSDARG00000060835 491 0.834 - 0.834 - - - - - - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
85. CABZ01003022.1 CABZ01003022.1 507 0.834 - 0.834 - - - - - - -
86. penkb ENSDARG00000036045 304 0.834 - 0.834 - - - - - - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
87. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 0.834 - - - - - 0.834 - - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
88. lrrc32 ENSDARG00000040621 348 0.833 - 0.833 - - - - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
89. cdh6 ENSDARG00000014522 5492 0.832 - - - - - 0.832 - - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
90. ubr3 ENSDARG00000042508 738 0.832 - 0.832 - - - - - - - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
91. smap1 ENSDARG00000031302 222 0.829 - - - - - 0.829 - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
92. klf2a ENSDARG00000042667, ENSDARG00000113441 588 0.828 - - - - - - - 0.828 - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
93. fam173b ENSDARG00000033451 513 0.827 - - - - - - 0.827 - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
94. MMADHC ENSDARG00000005870 212 0.827 - 0.827 - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
95. ctr9 ENSDARG00000009170 1265 0.827 - - - - - - - 0.827 - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
96. ppp1r12c ENSDARG00000052423 183 0.827 - - - - - 0.827 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
97. PLCXD1_1 PLCXD1_1 317 0.826 - - - - - 0.826 - - -
98. ELMO2 ENSDARG00000063527 301 0.826 - - - - - - 0.826 - - engulfment and cell motility 2 [Source:ZFIN;Acc:ZDB-GENE-140106-84]
99. ano5a ENSDARG00000015731 601 0.826 - 0.826 - - - - - - - anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
100. B3GNT1 B3GNT1 601 0.825 - 0.825 - - - - - - -

There are 722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA