Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mms19

Gene Name Gene ID Reads Annotation
mms19 ENSDARG00000079067 65 MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]










Genes with expression patterns similar to mms19

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mms19 ENSDARG00000079067 65 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
2. si:ch73-389b16.2 ENSDARG00000103802 340 2.415 - 0.713 - 0.903 0.799 - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
3. cog1 ENSDARG00000105131 35 2 1.000 - - - - - 1.000 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
4. CABZ01062083.1 CABZ01062083.1 40 1.927 - - - - 0.981 - 0.946 - -
5. ch25hl2 ENSDARG00000038728 100 1.92 1.000 - - - 0.920 - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
6. si:ch211-274p24.4 ENSDARG00000087088 36 1.907 1.000 - - - - - 0.907 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
7. NINJ1 ENSDARG00000103663 43 1.895 - - - - 0.895 - 1.000 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
8. myl2b ENSDARG00000053424 226 1.845 1.000 0.845 - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
9. irak4 ENSDARG00000100534 108 1.83 0.897 0.933 - - - - - - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
10. zp3a.2 ENSDARG00000042130 163 1.77 0.913 - - - 0.857 - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
11. ddx31 ENSDARG00000035507 167 1.757 - - - 0.958 - - 0.799 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
12. si:dkey-65b12.6 ENSDARG00000076830 2489 1.74 - 0.881 - - 0.859 - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
13. CR936200.1 CR936200.1 327 1.737 0.876 - - 0.861 - - - - -
14. rxrgb ENSDARG00000004697 332 1.737 - 0.789 - 0.948 - - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
15. slc51a ENSDARG00000045306 33 1.729 0.954 - - - - 0.775 - - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
16. si:dkey-208k4.1 si:dkey-208k4.1 15 1.718 1.000 - - - - - 0.718 - -
17. ripply3 ENSDARG00000036974 30 1.716 - 0.778 - - 0.938 - - - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
18. CABZ01044346.1 CABZ01044346.1 12 1.713 1.000 0.713 - - - - - - -
19. grk1a ENSDARG00000058803 13 1.713 - 0.713 - - - 1.000 - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
20. CU672227.1 ENSDARG00000105807 15 1.706 1.000 - - - - - - - 0.706
21. si:dkey-66i24.9 ENSDARG00000096689 796 1.704 - - - 0.892 0.812 - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
22. olfml3a ENSDARG00000061852 139 1.7 0.723 - - 0.977 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
23. BCL2 BCL2 122 1.689 0.769 - - - 0.920 - - - -
24. fxyd6 ENSDARG00000100971 51 1.68 - 0.938 0.742 - - - - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
25. fam169ab ENSDARG00000004177 232 1.667 0.713 - - 0.954 - - - - - family with sequence similarity 169, member Ab [Source:ZFIN;Acc:ZDB-GENE-091118-95]
26. tfb1m ENSDARG00000040727 142 1.664 - - - - 0.891 0.773 - - - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
27. hcn4l ENSDARG00000074419 46 1.657 - - 0.709 - - - 0.948 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
28. SNORD36 SNORD36 71 1.638 - - - - 0.846 - 0.792 - -
29. rab4a ENSDARG00000019144 192 1.629 0.823 - - - 0.806 - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
30. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.623 - - - 0.843 0.780 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
31. rhoab ENSDARG00000094673 26 1.623 0.905 - - - - - 0.718 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
32. fam58a 423 1.62 - - - 0.846 0.774 - - - - family with sequence similarity 58, member A, transcript variant X1
33. C11H3orf83 C11H3orf83 30 1.6 - 0.713 - - - 0.887 - - -
34. atrip ENSDARG00000063076 385 1.588 - 0.736 - 0.852 - - - - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
35. mc1r ENSDARG00000020237 108 1.581 0.774 - - - - - 0.807 - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
36. cog8 ENSDARG00000002798 229 1.566 - 0.854 - - 0.712 - - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
37. EXD1 ENSDARG00000098669 27 1.541 0.823 - - - - - 0.718 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
38. FP016199.1 FP016199.1 43 1.537 - - - - - 0.819 0.718 - -
39. rap2ab ENSDARG00000040246 63 1.524 - - - - 0.806 - 0.718 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
40. C3H7orf55 C3H7orf55 359 1.52 - - - 0.748 0.772 - - - -
41. GPR17 ENSDARG00000062030 713 1.48 0.743 - - 0.737 - - - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
42. si:ch211-209f23.3 ENSDARG00000095607 15 1.476 - 0.758 - - - - 0.718 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
43. SLC47A1_2 SLC47A1_2 50 1.468 - 0.713 - - - 0.755 - - -
44. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
45. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
46. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
47. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
48. fut10 ENSDARG00000100322 22 1 1.000 - - - - - - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
49. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
50. yod1 ENSDARG00000008542 56 1 - - - - - - 1.000 - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
51. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
52. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
53. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
54. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
55. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
56. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
57. ccdc157 ENSDARG00000056279 31 1 1.000 - - - - - - - - coiled-coil domain containing 157 [Source:ZFIN;Acc:ZDB-GENE-030616-155]
58. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
59. nmrk1 ENSDARG00000037913 18 1 1.000 - - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
60. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
61. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
62. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
63. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
64. PARP9 ENSDARG00000006848 34 1 - - - - - - 1.000 - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
65. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
66. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
67. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
68. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
69. si:dkey-29p23.3 si:dkey-29p23.3 3 1 1.000 - - - - - - - -
70. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
71. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
72. eng2a eng2a 186 1 - - - - - - 1.000 - -
73. BEND2_1 BEND2_1 45 1 - - - - - - 1.000 - -
74. FP085391.2 FP085391.2 85 1 1.000 - - - - - - - -
75. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
76. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
77. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
78. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
79. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
80. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
81. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
82. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
83. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
84. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
85. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
86. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
87. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
88. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
89. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
90. ftr42 4 1 1.000 - - - - - - - - finTRIM family, member 42
91. si:dkey-191g9.5 ENSDARG00000056080 60 1 - 1.000 - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
92. FKBPL ENSDARG00000095322 82 1 - - - - - - 1.000 - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
93. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
94. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
95. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
96. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
97. nrn1b ENSDARG00000042656 44 1 - - - - - - 1.000 - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
98. dnali1 ENSDARG00000069815 10 1 - - - - - - 1.000 - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
99. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
100. si:dkey-179k24.3 si:dkey-179k24.3 3 1 1.000 - - - - - - - -

There are 1368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA