Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mmp16b

Gene Name Gene ID Reads Annotation
mmp16b ENSDARG00000058876 1 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]










Genes with expression patterns similar to mmp16b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mmp16b ENSDARG00000058876 1 2 - - 1.000 - - - - - 1.000 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]
2. ftr79 ENSDARG00000093972 1 1.81 - - 0.943 - - - - - 0.867 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
3. ABCD2 ENSDARG00000059409 1 1.81 - - 0.943 - - - - - 0.867 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
4. 5S_rRNA_27 5S_rRNA_27 2 1.81 - - 0.943 - - - - - 0.867
5. MEIS2 MEIS2 3 1 - - - - - - - - 1.000
6. CACNA2D2 CACNA2D2 7 1 - - - - - - - - 1.000
7. fn3krp ENSDARG00000098208 4 1 - - - - - - - - 1.000 fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
8. pdcl ENSDARG00000009480 12 1 - - - - - - - - 1.000 phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
9. ZDHHC1 ENSDARG00000077546 14 1 - - - - - - - - 1.000 zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
10. CU550716.4 CU550716.4 14 1 - - - - - - - - 1.000
11. CU694952.2 CU694952.2 3 1 - - - - - - - - 1.000
12. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - - - - 1.000 si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
13. fndc7 fndc7 3 1 - - - - - - - - 1.000
14. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 0.988 - - 0.988 - - - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
15. mamdc2b ENSDARG00000073695 26 0.944 - - - - - - - - 0.944 MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
16. ppp1r14c_1 ENSDARG00000077341 3 0.943 - - 0.943 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
17. NLRC5 ENSDARG00000024631 11 0.943 - - 0.943 - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
18. mcoln1b ENSDARG00000058848 3 0.943 - - 0.943 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
19. si:ch211-39i19.5 si:ch211-39i19.5 6 0.943 - - 0.943 - - - - - -
20. UIMC1 200 0.943 - - 0.943 - - - - - - ubiquitin interaction motif containing 1
21. ush2a ENSDARG00000029482 10 0.943 - - 0.943 - - - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
22. si:ch211-231i17.4 ENSDARG00000094903 2 0.943 - - 0.943 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
23. si:dkeyp-35e5.5 ENSDARG00000104026 3 0.943 - - 0.943 - - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
24. OTUD7A ENSDARG00000045556 1 0.943 - - 0.943 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
25. si:ch73-366i20.1 ENSDARG00000092949 0 0.943 - - 0.943 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
26. prg4a ENSDARG00000010482 10 0.943 - - 0.943 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
27. mespba ENSDARG00000030347, ENSDARG00000110553 1 0.943 - - 0.943 - - - - - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
28. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 0.943 - - 0.943 - - - - - -
29. si:ch211-93g21.1 ENSDARG00000093602 5 0.943 - - 0.943 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
30. gabrr1 ENSDARG00000043902 1 0.943 - - 0.943 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
31. dnajc5b ENSDARG00000058147 6 0.943 - - 0.943 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
32. si:ch73-366i20.1_1 ENSDARG00000092949 1 0.943 - - 0.943 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
33. CR854923.1 CR854923.1 18 0.943 - - 0.943 - - - - - -
34. si:dkey-54j5.1 si:dkey-54j5.1 4 0.943 - - 0.943 - - - - - -
35. CR382372.1 ENSDARG00000096684 2 0.943 - - 0.943 - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
36. CABZ01023424.1 CABZ01023424.1 0 0.943 - - 0.943 - - - - - -
37. wu:fe37d09 wu:fe37d09 0 0.943 - - 0.943 - - - - - -
38. NCAM2 ENSDARG00000098523 2 0.943 - - 0.943 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
39. nkain2 ENSDARG00000069427 0 0.943 - - 0.943 - - - - - - sodium/potassium transporting ATPase interacting 2 [Source:ZFIN;Acc:ZDB-GENE-041014-77]
40. pcdh2g16 1 0.943 - - 0.943 - - - - - - protocadherin 2 gamma 16
41. si:ch211-233m11.1 ENSDARG00000074653 1 0.943 - - 0.943 - - - - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
42. si:ch211-253d24.2 si:ch211-253d24.2 12 0.943 - - 0.943 - - - - - -
43. zgc:136639os zgc:136639os 2 0.943 - - 0.943 - - - - - -
44. slc12a5a ENSDARG00000075815 9 0.943 - - 0.943 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
45. SYNGAP1 SYNGAP1 4 0.943 - - 0.943 - - - - - -
46. si:dkey-92j12.5 ENSDARG00000094677 5 0.943 - - 0.943 - - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
47. SRCIN1 SRCIN1 5 0.943 - - 0.943 - - - - - -
48. si:ch73-249k16.3 si:ch73-249k16.3 3 0.943 - - 0.943 - - - - - -
49. si:dkey-33i11.1 ENSDARG00000053027 2 0.943 - - 0.943 - - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
50. brinp3b ENSDARG00000075352 14 0.943 - - 0.943 - - - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
51. si:ch211-262n1.5 12 0.943 - - 0.943 - - - - - - si:ch211-262n1.5
52. si:dkey-247i3.5 ENSDARG00000096186 7 0.943 - - 0.943 - - - - - - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
53. slc26a4 ENSDARG00000069431 2 0.943 - - 0.943 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
54. ENSDARG00000087581 ENSDARG00000087581 2 0.943 - - 0.943 - - - - - -
55. si:ch211-161n3.4 ENSDARG00000045752 0 0.943 - - 0.943 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
56. si:dkey-149m13.4 ENSDARG00000114536 2 0.943 - - 0.943 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
57. lratb 3 0.943 - - 0.943 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
58. pde5ab ENSDARG00000051915 18 0.943 - - 0.943 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
59. si:ch211-207c6.4 si:ch211-207c6.4 7 0.943 - - 0.943 - - - - - -
60. PLEKHD1 ENSDARG00000091349 0 0.943 - - 0.943 - - - - - - pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:ZFIN;Acc:ZDB-GENE-130926-1]
61. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 0.943 - - 0.943 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
62. CABZ01085177.1 ENSDARG00000104644 6 0.943 - - 0.943 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
63. SCARNA15 SCARNA15 1 0.943 - - 0.943 - - - - - -
64. si:dkey-284p5.3 ENSDARG00000095638 4 0.943 - - 0.943 - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
65. si:dkey-11d20.4 si:dkey-11d20.4 6 0.943 - - 0.943 - - - - - -
66. 5S_rRNA_13 5S_rRNA_13 0 0.943 - - 0.943 - - - - - -
67. C11H1orf116 C11H1orf116 9 0.943 - - 0.943 - - - - - -
68. CABZ01079541.1 CABZ01079541.1 0 0.943 - - 0.943 - - - - - -
69. FCHO1 ENSDARG00000015356 2 0.943 - - 0.943 - - - - - - FCH domain only 1 [Source:ZFIN;Acc:ZDB-GENE-120613-1]
70. si:dkey-30h14.3 si:dkey-30h14.3 1 0.943 - - 0.943 - - - - - -
71. GPX2 ENSDARG00000089149 10 0.943 - - 0.943 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
72. si:dkey-20d21.6 si:dkey-20d21.6 0 0.943 - - 0.943 - - - - - -
73. U1_45 U1_45 0 0.943 - - 0.943 - - - - - -
74. esyt1b ENSDARG00000014239 8 0.943 - - 0.943 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
75. BX088603.2 ENSDARG00000099595 2 0.943 - - 0.943 - - - - - -
76. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 0.943 - - 0.943 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
77. BX004879.1 BX004879.1 0 0.943 - - 0.943 - - - - - -
78. AL929092.3 AL929092.3 0 0.943 - - 0.943 - - - - - -
79. tec ENSDARG00000098477 2 0.943 - - 0.943 - - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
80. mfi2 224 0.943 - - 0.943 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
81. slc7a14b ENSDARG00000079231 6 0.943 - - 0.943 - - - - - - solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
82. BX927318.2 BX927318.2 5 0.943 - - 0.943 - - - - - -
83. crhr1 ENSDARG00000003989 5 0.943 - - 0.943 - - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
84. pcdh1a4 0 0.943 - - 0.943 - - - - - - protocadherin 1 alpha 4
85. xpnpep2 ENSDARG00000026017 16 0.943 - - 0.943 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
86. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 0.943 - - 0.943 - - - - - -
87. crtac1b ENSDARG00000102517 0 0.943 - - 0.943 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
88. si:dkey-60a16.4 si:dkey-60a16.4 14 0.943 - - 0.943 - - - - - -
89. ENSDARG00000089102 ENSDARG00000089102 1 0.943 - - 0.943 - - - - - -
90. CU468684.1 CU468684.1 1 0.943 - - 0.943 - - - - - -
91. guca1e ENSDARG00000101567 2 0.943 - - 0.943 - - - - - - guanylate cyclase activator 1e [Source:ZFIN;Acc:ZDB-GENE-040426-1577]
92. OLFM4 OLFM4 6 0.943 - - 0.943 - - - - - -
93. shank3a ENSDARG00000063332 5 0.943 - - 0.943 - - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
94. si:dkey-89j23.3 si:dkey-89j23.3 9 0.943 - - 0.943 - - - - - -
95. FMN1 ENSDARG00000011975 2 0.943 - - 0.943 - - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
96. si:dkey-29j8.4 si:dkey-29j8.4 17 0.943 - - 0.943 - - - - - -
97. CR450785.2 ENSDARG00000111875 1 0.943 - - 0.943 - - - - - -
98. crispld1a ENSDARG00000077275 7 0.943 - - 0.943 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
99. clec3ba ENSDARG00000076541 3 0.943 - - 0.943 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
100. BX936443.2 BX936443.2 28 0.943 - - 0.943 - - - - - -

There are 192 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA