Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mmp13a

Gene Name Gene ID Reads Annotation
mmp13a ENSDARG00000012395, ENSDARG00000114451 178 matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]










Genes with expression patterns similar to mmp13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
2. pnpla3 ENSDARG00000102020 163 2.365 - 0.904 0.756 - - - 0.705 - - patatin-like phospholipase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-27]
3. socs9 ENSDARG00000101985 44 1.722 - 0.805 - - - - 0.917 - - suppressor of cytokine signaling 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4065]
4. hnf4a ENSDARG00000021494, ENSDARG00000112985 336 1.693 - 0.782 - - - 0.911 - - - hepatocyte nuclear factor 4, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1077]
5. STK31 ENSDARG00000056339 37 1.677 - 0.817 - - - - 0.860 - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
6. batf3 ENSDARG00000042577 34 1.666 - - 0.827 - - - 0.839 - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
7. spryd3 ENSDARG00000101982 666 1.629 - 0.820 - - - 0.809 - - - SPRY domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-22]
8. lmx1a ENSDARG00000020354 111 1.615 - - - - - - 0.839 0.776 - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
9. n6amt2 7 1.614 - - - - - - 0.839 - 0.775 N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
10. sorbs2a ENSDARG00000003046 242 1.607 - 0.778 - - - - 0.829 - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
11. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.594 - - - - - - 0.834 - 0.760 potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
12. slc6a6a ENSDARG00000012534 183 1.578 - 0.756 - - - - 0.822 - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
13. slc52a2 ENSDARG00000102035 57 1.566 - 0.821 - - - - 0.745 - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
14. EFEMP1_1 EFEMP1_1 8 1.563 - - - 0.724 - - 0.839 - -
15. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 1.557 - - - 0.767 - - - - 0.790 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
16. si:dkey-30j10.5 ENSDARG00000093186 13 1.553 - 0.779 - - - 0.774 - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
17. pargl ENSDARG00000101719 155 1.549 - - - - - 0.724 0.825 - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
18. lrrc30 lrrc30 40 1.547 - - 0.825 - - - 0.722 - -
19. si:dkey-68l7.1 si:dkey-68l7.1 159 1.543 0.714 - - - - - 0.829 - -
20. si:dkey-192g7.3 ENSDARG00000094012 105 1.538 - - - - - 0.768 0.770 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
21. C16H8orf76 C16H8orf76 329 1.537 0.774 - - - - 0.763 - - -
22. aar2 ENSDARG00000018658 297 1.531 - - - - - 0.806 0.725 - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
23. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.528 - 0.753 - - - 0.775 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
24. slc35b1 ENSDARG00000038213 465 1.525 0.707 0.818 - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
25. KHDRBS3 ENSDARG00000101020 408 1.518 - 0.763 - - - 0.755 - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
26. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.516 - 0.771 - - - - - 0.745 - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
27. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.515 - 0.725 - - - 0.790 - - - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
28. zgc:173710 zgc:173710 28 1.501 - 0.771 - - - - - 0.730 -
29. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.497 - - - - - 0.709 0.788 - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
30. btd ENSDARG00000099596 88 1.49 - 0.709 - - - 0.781 - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
31. lyrm5b ENSDARG00000045827 91 1.478 - - - - - 0.775 0.703 - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
32. slc30a4 ENSDARG00000007180 158 1.465 - - - - - 0.732 - 0.733 - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
33. sfi1 ENSDARG00000053992 1075 1.463 - - - - - 0.721 0.742 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
34. DCHS1 DCHS1 209 1.451 - 0.744 - - - - 0.707 - -
35. nmnat1 ENSDARG00000105748 102 1.451 - - - - - 0.749 - 0.702 - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
36. ccrn4la ccrn4la 843 1.436 - 0.723 - - - 0.713 - - -
37. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 0.949 - - - - - - 0.949 - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
38. dus1l ENSDARG00000089260 336 0.921 - - - - - - 0.921 - - dihydrouridine synthase 1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1435]
39. CABZ01080492.1 CABZ01080492.1 495 0.919 - - - - - - 0.919 - -
40. RNF115 ENSDARG00000062450 83 0.919 - - - - - - 0.919 - - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
41. pik3ap1 ENSDARG00000078285 23 0.919 - - - - - - 0.919 - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
42. zgc:174654 zgc:174654 54 0.919 - - - - - - 0.919 - -
43. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 0.919 - - - - - - 0.919 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
44. samsn1a ENSDARG00000054543 28 0.919 - - - - - - 0.919 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
45. got1l1 ENSDARG00000053644 49 0.919 - - - - - - 0.919 - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
46. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 0.919 - - - - - - 0.919 - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
47. wbp1la ENSDARG00000013245 143 0.919 - - - - - - 0.919 - - WW domain binding protein 1-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1961]
48. ddit4 ENSDARG00000037618 37 0.917 - - - - - - 0.917 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
49. gcdhl gcdhl 38 0.912 - - - - - - 0.912 - -
50. rasal3 ENSDARG00000089933 17 0.912 - - - - - - 0.912 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
51. si:ch211-10m5.3 si:ch211-10m5.3 10 0.912 - - - - - - 0.912 - -
52. TRPM4 TRPM4 60 0.906 - - 0.906 - - - - - -
53. polr3gla ENSDARG00000012044 148 0.897 - - - - - - 0.897 - - polymerase (RNA) III (DNA directed) polypeptide G like a [Source:ZFIN;Acc:ZDB-GENE-040912-67]
54. ncf1 ENSDARG00000033735 83 0.897 - - - - - - 0.897 - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
55. igf3 ENSDARG00000058058 19 0.896 - - - - - - 0.896 - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
56. CU104697.1 CU104697.1 19 0.896 - - - - - - 0.896 - -
57. PARM1 ENSDARG00000114063 58 0.895 - 0.895 - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
58. rab11fip1a ENSDARG00000046124 69 0.895 0.895 - - - - - - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
59. CABZ01036080.1 CABZ01036080.1 46 0.893 - - 0.893 - - - - - -
60. si:ch211-259i2.2 si:ch211-259i2.2 45 0.892 - - - - - - - - 0.892
61. CCDC135 ENSDARG00000100231 48 0.892 - - - - - - 0.892 - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
62. mirlet7i 192 0.889 - - - - - - 0.889 - - microRNA let-7i
63. CABZ01049362.1 ENSDARG00000099508 570 0.887 - 0.887 - - - - - - -
64. CABZ01051641.2 CABZ01051641.2 231 0.887 - 0.887 - - - - - - -
65. cep44 ENSDARG00000053106 683 0.887 - - - - - - 0.887 - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
66. si:dkey-119g10.4 si:dkey-119g10.4 7 0.886 - - - - - - 0.886 - -
67. rapgef4 ENSDARG00000079872 142 0.882 - - - - - - 0.882 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
68. slc7a2 ENSDARG00000037097, ENSDARG00000109424 122 0.881 - 0.881 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-5]
69. rmnd1 ENSDARG00000027465 116 0.879 - - - - - 0.879 - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
70. ITGAE ITGAE 53 0.878 - - - - - - 0.878 - -
71. CR356223.4 CR356223.4 42 0.878 - - - - - - 0.878 - -
72. si:ch211-57i17.2 ENSDARG00000093354 58 0.878 - - - - - - 0.878 - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
73. si:rp71-1f1.4 ENSDARG00000092476 11 0.876 - - - - - - 0.876 - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
74. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.873 - - - - - - 0.873 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
75. si:dkey-114b16.4 si:dkey-114b16.4 35 0.871 - - - - - - 0.871 - -
76. atg16l1 ENSDARG00000099430 924 0.87 - - - - - 0.870 - - - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
77. C12H10orf2 C12H10orf2 245 0.867 - - - - - 0.867 - - -
78. cox4i2 ENSDARG00000022509 362 0.867 - - - - - 0.867 - - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
79. SLC27A3 SLC27A3 240 0.865 - - - - - 0.865 - - -
80. caprin2 ENSDARG00000020749 39 0.865 - - - - - - 0.865 - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
81. HYAL2_1 HYAL2_1 266 0.865 - - - - - - 0.865 - -
82. si:dkey-14d8.9 si:dkey-14d8.9 66 0.865 - - - - - - 0.865 - -
83. C7 C7 81 0.865 - - - - - - 0.865 - -
84. eea1 ENSDARG00000062868 1126 0.864 - - - - - 0.864 - - - early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
85. gpib ENSDARG00000103826 19 0.863 - - - - - - 0.863 - - glucose-6-phosphate isomerase b [Source:ZFIN;Acc:ZDB-GENE-020513-3]
86. trap1_1 ENSDARG00000024317, ENSDARG00000114173 480 0.862 - 0.862 - - - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
87. gbp1 ENSDARG00000038668 520 0.86 - - - - - 0.860 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
88. PACS1_1 PACS1_1 1264 0.859 - 0.859 - - - - - - -
89. cabp1a ENSDARG00000019990 110 0.859 - - - - - 0.859 - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
90. rassf7a ENSDARG00000079917 162 0.859 - - - - - 0.859 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a [Source:ZFIN;Acc:ZDB-GENE-091013-3]
91. sostdc1a ENSDARG00000068892 127 0.857 - 0.857 - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
92. gata3 ENSDARG00000016526 1857 0.856 - - - - - 0.856 - - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
93. galns ENSDARG00000051853, ENSDARG00000113387 347 0.855 - - - - - - 0.855 - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
94. angptl3 ENSDARG00000044365 574 0.854 - - - - - 0.854 - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
95. CGREF1 ENSDARG00000075444 397 0.854 - 0.854 - - - - - - - cell growth regulator with EF-hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-131121-137]
96. SLC41A2 SLC41A2 202 0.853 - - - - - - 0.853 - -
97. SLC5A6 SLC5A6 179 0.853 - - - - - - 0.853 - -
98. mpc1 ENSDARG00000093448 382 0.853 - 0.853 - - - - - - - mitochondrial pyruvate carrier 1 [Source:ZFIN;Acc:ZDB-GENE-040718-94]
99. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.853 - 0.853 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
100. lpar6a ENSDARG00000062552 1348 0.853 - 0.853 - - - - - - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]

There are 1122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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