Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mmp11b

Gene Name Gene ID Reads Annotation
mmp11b ENSDARG00000016718 1136 matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]










Genes with expression patterns similar to mmp11b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mmp11b ENSDARG00000016718 1136 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]
2. plagx ENSDARG00000036855 3768 1.834 - 0.991 - 0.843 - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
3. cnot11 ENSDARG00000068596 829 1.801 - 0.997 - 0.804 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
4. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.721 - 0.996 - - - 0.725 - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
5. pigp ENSDARG00000038805 611 1.719 - 0.995 - - - 0.724 - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
6. serpinh1b ENSDARG00000019949 11693 1.695 - 0.986 - - - - 0.709 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
7. CYYR1 ENSDARG00000103783 4107 1.687 - 0.976 - 0.711 - - - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
8. TTC17 ENSDARG00000044812 124 1.626 - - - 0.883 - 0.743 - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
9. ECI2 ENSDARG00000102412 848 1.623 - - - 0.818 - 0.805 - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
10. rbm34 ENSDARG00000101877 1573 1.604 - 0.865 - 0.739 - - - - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
11. TMEM106C ENSDARG00000098105 793 1.592 - - - 0.838 - 0.754 - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
12. sfi1 ENSDARG00000053992 1075 1.59 - - - 0.884 - 0.706 - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
13. nup35 ENSDARG00000012222 1212 1.583 - - - 0.744 - 0.839 - - - nucleoporin 35 [Source:ZFIN;Acc:ZDB-GENE-030131-9407]
14. vps8 ENSDARG00000060477, ENSDARG00000113757 271 1.572 0.726 - - - - 0.846 - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
15. CU570791.5 CU570791.5 872 1.565 - - - 0.861 - 0.704 - - -
16. gpr98 gpr98 717 1.551 0.794 - - 0.757 - - - - -
17. mtor ENSDARG00000053196 2156 1.543 - - - 0.741 - 0.802 - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
18. hoxa13b ENSDARG00000036254 404 1.543 - - 0.712 - 0.831 - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
19. c1qtnf5 ENSDARG00000056134 729 1.526 - - - - 0.773 0.753 - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
20. supt4h1 ENSDARG00000113969 1024 1.498 - - - 0.721 - 0.777 - - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
21. slc38a10 ENSDARG00000077081 1691 1.49 - - - - 0.722 0.768 - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
22. polr3a ENSDARG00000102569 1072 1.458 - - - 0.731 - 0.727 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
23. acbd3 ENSDARG00000042623 2643 1.445 - - - 0.702 - 0.743 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
24. gtf3c5 ENSDARG00000067979 702 1.431 - - - 0.721 - 0.710 - - - general transcription factor IIIC, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-060810-66]
25. myo9al1 myo9al1 1194 0.999 - 0.999 - - - - - - -
26. rarga ENSDARG00000034117 1238 0.997 - 0.997 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
27. klhl20 ENSDARG00000038801 936 0.997 - 0.997 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
28. recql ENSDARG00000007175 501 0.997 - 0.997 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
29. lsm1 ENSDARG00000043177 767 0.997 - 0.997 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
30. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.997 - 0.997 - - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
31. zgc:77158 ENSDARG00000013784 634 0.997 - 0.997 - - - - - - - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
32. naa15b ENSDARG00000030368 535 0.997 - 0.997 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
33. capn1a ENSDARG00000052702 1123 0.997 - 0.997 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
34. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.997 - 0.997 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
35. tert ENSDARG00000042637 463 0.997 - 0.997 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
36. si:ch211-87l2.1 si:ch211-87l2.1 2403 0.997 - 0.997 - - - - - - -
37. znf740 znf740 2458 0.997 - 0.997 - - - - - - -
38. zgc:110191 zgc:110191 359 0.996 - 0.996 - - - - - - -
39. uqcrfs1 ENSDARG00000007745 4654 0.996 - 0.996 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
40. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.996 - 0.996 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
41. ms4a17a.7 ENSDARG00000043796 352 0.996 - 0.996 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
42. sema3gb ENSDARG00000013607 1531 0.996 - 0.996 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
43. crabp2a ENSDARG00000073978 868 0.996 - 0.996 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
44. si:ch211-251b21.1 ENSDARG00000007275 15724 0.996 - 0.996 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
45. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 0.996 - 0.996 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
46. CABZ01061717.1 CABZ01061717.1 320 0.996 - 0.996 - - - - - - -
47. prkcea ENSDARG00000003008 1118 0.996 - 0.996 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
48. RMDN2 ENSDARG00000078761 717 0.996 - 0.996 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
49. cnn3b ENSDARG00000029856 4807 0.996 - 0.996 - - - - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
50. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.996 - 0.996 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
51. ogfr ENSDARG00000037837 1001 0.996 - 0.996 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
52. glo1 ENSDARG00000068978 1384 0.996 - 0.996 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
53. ddr2l ENSDARG00000103830 1921 0.996 - 0.996 - - - - - - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
54. hoxa5a ENSDARG00000102501 1667 0.996 - 0.996 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
55. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.996 - 0.996 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
56. hic1 ENSDARG00000055493 219 0.996 - 0.996 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
57. SFT2D2_1 SFT2D2_1 219 0.996 - 0.996 - - - - - - -
58. ergic2 ENSDARG00000051936, ENSDARG00000111918 798 0.996 - 0.996 - - - - - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
59. brca2 ENSDARG00000079015 410 0.996 - 0.996 - - - - - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
60. si:ch211-13f8.1 ENSDARG00000093342 274 0.996 - 0.996 - - - - - - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
61. lbx1a ENSDARG00000018321 634 0.996 - 0.996 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
62. lix1l ENSDARG00000063244 2061 0.996 - 0.996 - - - - - - - limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
63. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.996 - 0.996 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
64. plp1a ENSDARG00000103732 3544 0.996 - 0.996 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
65. ap2b1 ENSDARG00000035152 2912 0.995 - 0.995 - - - - - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
66. stim1a ENSDARG00000060723 1200 0.995 - 0.995 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
67. calm2b 3890 0.995 - 0.995 - - - - - - - calmodulin 2b, (phosphorylase kinase, delta)
68. cenpe ENSDARG00000063385 4428 0.995 - 0.995 - - - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
69. PRKAG2 PRKAG2 688 0.995 - 0.995 - - - - - - -
70. tmem181 ENSDARG00000045910 2288 0.994 - 0.994 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
71. fam192a ENSDARG00000041631 4113 0.994 - 0.994 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
72. PPFIBP1_1 PPFIBP1_1 2256 0.994 - 0.994 - - - - - - -
73. ccng2 ENSDARG00000017602 3141 0.994 - 0.994 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
74. cdipt ENSDARG00000070686 1318 0.994 - 0.994 - - - - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
75. cylda ENSDARG00000060058 768 0.993 - 0.993 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
76. ZNF70_11 ZNF70_11 1246 0.993 - 0.993 - - - - - - -
77. arf6a ENSDARG00000101626 2959 0.993 - 0.993 - - - - - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
78. agtpbp1 ENSDARG00000105214 1038 0.993 - 0.993 - - - - - - - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
79. ddx6 ENSDARG00000061338 2514 0.992 - 0.992 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
80. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.992 - 0.992 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
81. tfe3a ENSDARG00000098903 1530 0.992 - 0.992 - - - - - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
82. FAM195A FAM195A 1134 0.991 - 0.991 - - - - - - -
83. abcb7 ENSDARG00000062795 1404 0.991 - 0.991 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
84. axin1 ENSDARG00000102964 1710 0.991 - 0.991 - - - - - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
85. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 0.991 - 0.991 - - - - - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
86. AKAP2 AKAP2 4178 0.99 - 0.990 - - - - - - -
87. dido1 ENSDARG00000057940 3819 0.99 - 0.990 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
88. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 0.989 - 0.989 - - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
89. hoxc3a ENSDARG00000070339 3379 0.989 - 0.989 - - - - - - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
90. fam133b ENSDARG00000013863 5070 0.988 - 0.988 - - - - - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
91. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.988 - 0.988 - - - - - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
92. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.988 - 0.988 - - - - - - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
93. npm1b ENSDARG00000037675 5448 0.988 - 0.988 - - - - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
94. MAF1 ENSDARG00000013122 6899 0.988 - 0.988 - - - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
95. mrp63 mrp63 2500 0.988 - 0.988 - - - - - - -
96. znf259 znf259 1819 0.987 - 0.987 - - - - - - -
97. eif5 ENSDARG00000003681 7986 0.987 - 0.987 - - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
98. col4a1 ENSDARG00000055009 3083 0.986 - 0.986 - - - - - - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
99. thoc2 ENSDARG00000037503 8711 0.986 - 0.986 - - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
100. atl3 ENSDARG00000004270 2806 0.986 - 0.986 - - - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]

There are 1308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA