Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mmd

Gene Name Gene ID Reads Annotation
mmd ENSDARG00000040387 4522 monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]










Genes with expression patterns similar to mmd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mmd ENSDARG00000040387 4522 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
2. acsbg2 ENSDARG00000004094 2445 2.489 0.979 0.724 - - - - 0.786 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
3. sppl3 ENSDARG00000025220 1892 2.228 - 0.743 - - - - 0.780 - 0.705 signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
4. srrm2 ENSDARG00000037965 1967 2.222 - 0.771 - - - 0.747 - - 0.704 serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
5. paip2b ENSDARG00000008706 4255 2.209 - 0.754 0.730 - - - - - 0.725 poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
6. hagh ENSDARG00000025338 2911 1.807 0.972 0.835 - - - - - - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
7. ppapdc1b ppapdc1b 2866 1.788 0.987 - - - - - 0.801 - -
8. dync1li1 ENSDARG00000098317 729 1.773 0.985 0.788 - - - - - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
9. zfand5b ENSDARG00000002271 4145 1.76 0.981 0.779 - - - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
10. srsf6a ENSDARG00000013729 8576 1.748 0.966 - - - - 0.782 - - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
11. cx35.4 ENSDARG00000042866 685 1.746 0.983 - - - - - 0.763 - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
12. dhx15 ENSDARG00000015392 7496 1.731 0.978 - - - - - 0.753 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
13. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.73 0.981 - - - - - 0.749 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
14. bambib ENSDARG00000099677 4267 1.729 0.972 - - - - 0.757 - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
15. mpi ENSDARG00000030786 3052 1.728 0.987 - - - - - 0.741 - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
16. knop1 ENSDARG00000077721 2198 1.723 0.978 0.745 - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
17. supt6h ENSDARG00000006524 3221 1.718 0.984 - 0.734 - - - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
18. dab2 ENSDARG00000031761 2000 1.717 0.978 - - - - - 0.739 - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
19. epdl2 ENSDARG00000055539 1895 1.709 0.982 - - - - - 0.727 - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
20. nxf1 ENSDARG00000055076 3251 1.695 0.987 - - - - - - - 0.708 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
21. ywhaqb ENSDARG00000023323 28138 1.686 0.883 - - - - 0.803 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
22. myef2 ENSDARG00000059398 6050 1.685 0.981 - - - - - - - 0.704 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
23. wdr5 ENSDARG00000016903 4834 1.646 - - - - - - 0.892 - 0.754 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
24. c5 ENSDARG00000021004 3536 1.645 0.864 - - - - - 0.781 - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
25. ppib ENSDARG00000092798 21969 1.643 0.824 - - - - - 0.819 - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
26. luc7l3 ENSDARG00000014366 4416 1.63 - 0.841 - - - - - - 0.789 LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
27. pcbp2 ENSDARG00000099039 4248 1.623 - 0.720 - - - - 0.903 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
28. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.622 - - 0.734 - - 0.888 - - - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
29. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.615 - 0.730 - - - - 0.885 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
30. si:dkey-69o16.5 ENSDARG00000070057 3628 1.615 0.871 - - - - 0.744 - - - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
31. SNRPG ENSDARG00000099667 18697 1.602 0.847 - - - - - - - 0.755 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
32. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.601 - 0.715 - - - - 0.886 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
33. MAP4K4 ENSDARG00000098670 4665 1.599 - - - - - - 0.875 - 0.724 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
34. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.589 - - - - - 0.819 - - 0.770 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
35. ube2e3 ENSDARG00000012244 8909 1.58 - - - 0.706 - - 0.874 - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
36. CU571336.2 CU571336.2 2690 1.579 - - - - - 0.792 - - 0.787
37. csrp2bp 2642 1.568 - 0.719 - - - 0.849 - - - csrp2 binding protein
38. kansl1a ENSDARG00000090895 2593 1.562 - - - - - 0.759 - - 0.803 KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
39. kif11 ENSDARG00000010948 4973 1.553 - - - - - - 0.779 - 0.774 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
40. sh3bgrl3 ENSDARG00000098075 3071 1.547 - - - - - 0.785 0.762 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
41. arhgap1 ENSDARG00000024324 6904 1.54 - - - - - 0.795 - - 0.745 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
42. slc35d2 ENSDARG00000089837 1606 1.537 - 0.753 - - - 0.784 - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
43. nrf1 ENSDARG00000000018 4683 1.536 - 0.784 - - - - 0.752 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
44. marcksa ENSDARG00000004049 2518 1.535 - - 0.814 - - - - - 0.721 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
45. daam1a ENSDARG00000015059 1460 1.53 - - - - - 0.734 0.796 - - dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
46. GATAD2B ENSDARG00000005834 3855 1.515 - - - - - 0.778 - - 0.737 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
47. si:dkey-18f7.2 si:dkey-18f7.2 895 1.515 - 0.719 - - - 0.796 - - -
48. top2a ENSDARG00000024488 4273 1.514 - - 0.768 - - - - - 0.746 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
49. psenen ENSDARG00000068698 2777 1.504 - 0.775 - - - 0.729 - - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
50. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.502 - - - 0.737 - - - - 0.765 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
51. col6a1 ENSDARG00000074908 2339 1.496 - 0.718 - - - 0.778 - - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
52. ralbp1 ENSDARG00000078653 2440 1.495 - 0.743 - - - - 0.752 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
53. hs6st2 ENSDARG00000012025 1145 1.494 - 0.709 - - - - 0.785 - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]
54. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.492 - - - - - 0.704 0.788 - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
55. tbca ENSDARG00000016754 6427 1.487 - 0.772 - - - 0.715 - - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
56. acot11a ENSDARG00000058229 531 1.484 - - - - - 0.724 0.760 - - acyl-CoA thioesterase 11a [Source:ZFIN;Acc:ZDB-GENE-050522-538]
57. gmfb ENSDARG00000028327 6522 1.484 - 0.751 - - - 0.733 - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
58. PFKL_1 PFKL_1 298 1.483 - - - - - 0.711 0.772 - -
59. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.481 - 0.763 - - - 0.718 - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
60. wu:fk48d07 wu:fk48d07 13245 1.48 - - - - - - 0.717 - 0.763
61. ARHGAP22 ENSDARG00000076434 1406 1.476 - - - - - - 0.757 - 0.719 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
62. cdca7a ENSDARG00000077620 9345 1.471 - - - 0.743 - - 0.728 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
63. cplx4b ENSDARG00000059486 3192 1.47 - 0.711 - - - - 0.759 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
64. dag1 ENSDARG00000016153 10886 1.469 - - 0.712 - - - 0.757 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
65. efnb2a ENSDARG00000020164 5262 1.46 - - - - - 0.703 - - 0.757 ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
66. si:ch211-161h7.4 ENSDARG00000087238 4399 1.453 - 0.717 - - - - - - 0.736 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
67. ldb1a ENSDARG00000010137 3035 1.453 - - - - - 0.715 - - 0.738 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
68. znf319 znf319 3027 1.447 - 0.706 - - - - - - 0.741
69. alcamb ENSDARG00000058538 5672 1.442 - 0.723 - - - 0.719 - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
70. IWS1 2428 1.441 - - 0.730 - - - - - 0.711 IWS1, SUPT6H interacting protein, transcript variant X2
71. camlg ENSDARG00000100409 2157 1.44 - 0.729 - - - - - - 0.711 calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
72. dhx38 ENSDARG00000100013 1854 1.433 - 0.715 - - - - - - 0.718 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
73. lfng ENSDARG00000037879 11783 1.421 - - - 0.703 - - - - 0.718 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
74. CABZ01083862.1 ENSDARG00000106989 779 1.403 - - 0.702 - 0.701 - - - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
75. rnd3b ENSDARG00000007396 881 0.99 0.990 - - - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
76. sas sas 1783 0.989 0.989 - - - - - - - -
77. txnipa ENSDARG00000036107 8863 0.988 0.988 - - - - - - - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
78. psph ENSDARG00000040314 1359 0.988 0.988 - - - - - - - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
79. grina grina 4656 0.987 0.987 - - - - - - - -
80. adkb ENSDARG00000095947 990 0.987 0.987 - - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
81. hmgcrb ENSDARG00000105206 2080 0.987 0.987 - - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
82. si:dkey-199f5.8 ENSDARG00000018853 3249 0.986 0.986 - - - - - - - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
83. sel1l ENSDARG00000004581 2246 0.986 0.986 - - - - - - - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
84. qpctla ENSDARG00000061691 869 0.986 0.986 - - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
85. ppm1k ENSDARG00000010655 1285 0.986 0.986 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
86. C18H15orf39 C18H15orf39 1125 0.985 0.985 - - - - - - - -
87. zgc:100919 zgc:100919 7746 0.985 0.985 - - - - - - - -
88. CDIP1 ENSDARG00000076118 1294 0.985 0.985 - - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
89. sort1b ENSDARG00000056252 2652 0.985 0.985 - - - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
90. ZNF385C ENSDARG00000058154 478 0.984 0.984 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
91. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.984 0.984 - - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
92. rad50 ENSDARG00000038917 1105 0.984 0.984 - - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
93. mycla ENSDARG00000006003 1866 0.984 0.984 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
94. apaf1 ENSDARG00000021239 1185 0.984 0.984 - - - - - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
95. si:dkey-4c15.19 si:dkey-4c15.19 219 0.984 0.984 - - - - - - - -
96. gtf2a1 ENSDARG00000011000 2026 0.984 0.984 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
97. ppp1cc 2361 0.984 0.984 - - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
98. CT955984.1 ENSDARG00000113577 1482 0.984 0.984 - - - - - - - -
99. HAUS8 HAUS8 625 0.984 0.984 - - - - - - - -
100. csde1_1 ENSDARG00000074758 2759 0.984 0.984 - - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]

There are 1163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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