Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mlh1

Gene Name Gene ID Reads Annotation
mlh1 ENSDARG00000025948 130 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]










Genes with expression patterns similar to mlh1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mlh1 ENSDARG00000025948 130 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
2. ndst2b ENSDARG00000060678 453 2.256 0.835 - - - - 0.704 - 0.717 - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
3. si:dkey-29n10.3 si:dkey-29n10.3 66 1.885 - 0.892 - - - - - 0.993 -
4. MYLK4 MYLK4 180 1.85 - 0.863 - - - - - 0.987 -
5. si:ch211-269i23.2 432 1.846 - - - - - - 0.872 0.974 - si:ch211-269i23.2, transcript variant X3
6. OLFM4_1 OLFM4_1 213 1.807 - - - - - - 0.899 0.908 -
7. mgat2 ENSDARG00000052408 264 1.76 - - - 0.788 - - - 0.972 - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
8. pik3cg ENSDARG00000017757 157 1.754 - 0.866 - - - - 0.888 - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
9. fbxo7 ENSDARG00000099833 304 1.744 - - - - - - 0.759 0.985 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
10. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.735 - 0.830 - - - - 0.905 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
11. RAPGEFL1 ENSDARG00000079912 1074 1.722 - - - - - - 0.777 0.945 - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
12. TRHDE_1 TRHDE_1 102 1.715 - - - - - 0.740 - 0.975 -
13. cdc14aa ENSDARG00000013858 18 1.713 - 0.920 0.793 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
14. CU234171.2 CU234171.2 86 1.71 - - - 0.724 - - - 0.986 -
15. sdad1 ENSDARG00000105117 2819 1.697 - - - - - - 0.817 0.880 - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
16. cacnb2a ENSDARG00000099045 374 1.696 - 0.706 - - - - - 0.990 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
17. gpr143 ENSDARG00000034572 559 1.694 - - - - - - 0.866 0.828 - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
18. si:rp71-36a1.5_1 ENSDARG00000077252, ENSDARG00000090882 93 1.69 0.876 - - - - - 0.814 - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
19. CABZ01079241.1 ENSDARG00000098424 88 1.686 - - - - - 0.709 0.977 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
20. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.679 - - - - - - 0.727 0.952 - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
21. AP5B1 ENSDARG00000078805 62 1.655 - 0.706 - - - - 0.949 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
22. BX510934.1 ENSDARG00000087544 140 1.645 - 0.891 - 0.754 - - - - -
23. lancl1 ENSDARG00000013741 563 1.635 - 0.714 - - - - - 0.921 - LanC antibiotic synthetase component C-like 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040924-1]
24. grna ENSDARG00000004954 189 1.632 - 0.892 - - - - 0.740 - - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
25. myb ENSDARG00000053666, ENSDARG00000114024 58 1.605 - 0.892 - 0.713 - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
26. cdh13 ENSDARG00000014215 106 1.599 - 0.702 - - - - 0.897 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
27. wrap53 ENSDARG00000086150 975 1.595 - 0.706 - - - - - 0.889 - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
28. slc12a5b ENSDARG00000078187 329 1.588 - - - - - 0.752 - 0.836 - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
29. cep72 ENSDARG00000105258 344 1.585 - 0.849 - - - 0.736 - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
30. flrt1a 107 1.578 - - 0.737 - - 0.841 - - - fibronectin leucine rich transmembrane protein 1a, transcript variant X2
31. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.573 - - - - - 0.760 0.813 - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
32. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.572 - 0.829 - - - 0.743 - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
33. grm4 ENSDARG00000040156 342 1.557 0.710 0.847 - - - - - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
34. ATP5J2 68 1.534 - 0.777 0.757 - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
35. ampd3a ENSDARG00000005800 498 1.528 - - 0.745 - - - - 0.783 - adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]
36. AL844186.1 ENSDARG00000114351 41 1.52 - 0.808 - 0.712 - - - - -
37. zdhhc8a ENSDARG00000042872 306 1.516 - - 0.723 - - - - 0.793 - zinc finger, DHHC-type containing 8a [Source:ZFIN;Acc:ZDB-GENE-091118-26]
38. rab25a ENSDARG00000058800 451 1.503 - 0.702 - - - - - 0.801 - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
39. zgc:100951 ENSDARG00000111442 24 1.5 0.798 0.702 - - - - - - - zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
40. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1.491 - 0.731 0.760 - - - - - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
41. SDR42E2 ENSDARG00000059914 132 1.471 - - - 0.753 - - 0.718 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
42. FOXJ3 ENSDARG00000075774 197 1.467 - - 0.731 0.736 - - - - - forkhead box J3 [Source:ZFIN;Acc:ZDB-GENE-101005-1]
43. ptprz1a ENSDARG00000051814 385 1.456 - - 0.711 - - - 0.745 - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
44. adrb3a ENSDARG00000053646 354 1.453 - 0.739 - - - - 0.714 - - adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
45. pald1b ENSDARG00000039352 66 1.451 - 0.734 - 0.717 - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
46. chrna5 ENSDARG00000003420 137 1.429 - - - - - 0.716 0.713 - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
47. zgc:110130 ENSDARG00000039203 352 1.426 - - 0.700 - - 0.726 - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
48. wu:fb11h05 wu:fb11h05 126 1 - 1.000 - - - - - - -
49. htra3a ENSDARG00000052895 28 0.994 - - - - - - - 0.994 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
50. BX682234.2 BX682234.2 28 0.993 - - - - - - - 0.993 -
51. FCHSD2 FCHSD2 35 0.993 - - - - - - - 0.993 -
52. CR936337.1 CR936337.1 38 0.993 - - - - - - - 0.993 -
53. si:ch211-106h4.9 ENSDARG00000075706 36 0.993 - - - - - - - 0.993 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
54. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.993 - - - - - - - 0.993 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
55. si:ch73-67c22.3 si:ch73-67c22.3 30 0.993 - - - - - - - 0.993 -
56. si:ch211-67e16.2 41 0.993 - - - - - - - 0.993 - si:ch211-67e16.2, transcript variant X2
57. CR848836.5 CR848836.5 42 0.993 - - - - - - - 0.993 -
58. sv2ba ENSDARG00000057427 33 0.993 - - - - - - - 0.993 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
59. JAKMIP3 ENSDARG00000100708 56 0.993 - - - - - - - 0.993 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
60. chrna2b ENSDARG00000057025 217 0.992 - - - - - - - 0.992 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
61. CABZ01087562.1 CABZ01087562.1 80 0.992 - - - - - - - 0.992 -
62. si:dkey-10g2.5 si:dkey-10g2.5 72 0.992 - - - - - - - 0.992 -
63. gcdhl gcdhl 38 0.992 - - - - - - - 0.992 -
64. si:ch211-254c8.2 233 0.992 - - - - - - - 0.992 - si:ch211-254c8.2, transcript variant X4
65. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.991 - - - - - - - 0.991 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
66. cx28.8 ENSDARG00000071042 62 0.991 - - - - - - - 0.991 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
67. styx ENSDARG00000057699 48 0.99 - - - - - - - 0.990 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
68. CABZ01114089.1 CABZ01114089.1 127 0.99 - - - - - - - 0.990 -
69. aars2 ENSDARG00000107385 190 0.99 - - - - - - - 0.990 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
70. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.99 - - - - - - - 0.990 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
71. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.989 - - - - - - - 0.989 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
72. rad23aa ENSDARG00000020001 374 0.989 - - - - - - - 0.989 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
73. dnah9l ENSDARG00000062630 268 0.989 - - - - - - - 0.989 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
74. phf19 ENSDARG00000078050 117 0.988 - - - - - - - 0.988 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
75. fam63b 484 0.988 - - - - - - - 0.988 - family with sequence similarity 63, member B
76. mknk1 ENSDARG00000018411 749 0.988 - - - - - - - 0.988 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
77. trabd ENSDARG00000010445 195 0.988 - - - - - - - 0.988 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
78. si:dkey-57k17.1 ENSDARG00000104697 442 0.987 - - - - - - - 0.987 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
79. SNAPC2 ENSDARG00000036473 158 0.987 - - - - - - - 0.987 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
80. slc2a8 ENSDARG00000104278 764 0.986 - - - - - - - 0.986 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
81. rab20 ENSDARG00000005049 346 0.984 - - - - - - - 0.984 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
82. SH2B2 ENSDARG00000090421 245 0.984 - - - - - - - 0.984 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
83. si:dkey-11f4.16 ENSDARG00000099799 121 0.984 - - - - - - - 0.984 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
84. rbm27 ENSDARG00000060521 185 0.983 - - - - - - - 0.983 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
85. pggt1b ENSDARG00000103464 441 0.983 - - - - - - - 0.983 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
86. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.983 - - - - - - - 0.983 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
87. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.983 - - - - - - - 0.983 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
88. hs3st3l ENSDARG00000059903 184 0.982 - - - - - - 0.982 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
89. elp3 ENSDARG00000042005 936 0.981 - - - - - - - 0.981 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
90. phf16 phf16 1116 0.981 - - - - - - - 0.981 -
91. clip2 ENSDARG00000059596 529 0.981 - - - - - - - 0.981 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
92. STIM2 STIM2 644 0.98 - - - - - - - 0.980 -
93. si:dkey-266m15.6 ENSDARG00000078508 490 0.98 - - - - - - - 0.980 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
94. zgc:66474 ENSDARG00000026453 784 0.98 - - - - - - - 0.980 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
95. hey2 ENSDARG00000013441 540 0.979 - - - - - - - 0.979 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
96. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.978 - - - - - - - 0.978 - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
97. rint1 ENSDARG00000005547 898 0.977 - - - - - - - 0.977 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
98. snx8a ENSDARG00000074842 411 0.976 - - - - - - - 0.976 - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
99. zcchc9 ENSDARG00000007531 1748 0.976 - - - - - - - 0.976 - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
100. noc4l ENSDARG00000045565 1337 0.975 - - - - - - - 0.975 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]

There are 1466 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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