Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mitfa

Gene Name Gene ID Reads Annotation
mitfa ENSDARG00000003732 1288 microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]










Genes with expression patterns similar to mitfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mitfa ENSDARG00000003732 1288 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
2. tyrp1b ENSDARG00000056151 3803 2.298 0.734 0.814 - - - - 0.750 - - tyrosinase-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-249]
3. cax1 ENSDARG00000045601 366 2.206 0.782 0.705 - - - 0.719 - - - cation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
4. gch2 ENSDARG00000099101 45623 1.729 0.891 0.838 - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
5. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 1.675 0.804 - - - - 0.871 - - - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
6. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.669 0.863 0.806 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
7. slc2a15a ENSDARG00000029894 2674 1.657 0.859 0.798 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
8. slc22a7a ENSDARG00000056028 2426 1.655 0.825 0.830 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
9. rab38a rab38a 1094 1.637 0.839 - - - - - - 0.798 -
10. sprb ENSDARG00000058553 1694 1.633 0.918 0.715 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
11. impdh1b ENSDARG00000029524 7472 1.622 0.865 0.757 - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
12. sox10 ENSDARG00000077467 1936 1.619 0.890 0.729 - - - - - - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
13. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.617 0.874 0.743 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
14. zic4 ENSDARG00000031307 1228 1.606 0.834 0.772 - - - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
15. tpcn1 ENSDARG00000062362 563 1.603 0.862 - - - - - 0.741 - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
16. mapk11 ENSDARG00000045836 846 1.593 0.831 0.762 - - - - - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
17. rims2b ENSDARG00000102690 275 1.586 0.828 0.758 - - - - - - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
18. CABZ01072954.1 CABZ01072954.1 2330 1.582 0.814 0.768 - - - - - - -
19. foxd1 ENSDARG00000029179 726 1.578 0.790 0.788 - - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
20. si:ch211-243a20.3 ENSDARG00000092240 151 1.576 0.704 - - - - 0.872 - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
21. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.555 0.731 - - - - 0.824 - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
22. dlk2 ENSDARG00000076247 387 1.552 - - - - - 0.843 0.709 - - delta-like 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081107-4]
23. gpn3 ENSDARG00000069525 499 1.549 - 0.848 - - - - 0.701 - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
24. cry4 ENSDARG00000011890 980 1.544 - 0.768 - - - 0.776 - - - cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
25. HSPA4L ENSDARG00000053544 363 1.54 0.789 - - - - 0.751 - - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
26. atp5o 10343 1.534 - - - - - 0.748 0.786 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
27. agpat6 agpat6 587 1.532 - 0.727 - - - 0.805 - - -
28. ednrb1a ednrb1a 1255 1.528 - 0.780 - - - - 0.748 - -
29. uncx4.1 ENSDARG00000037760 472 1.519 - - - - - 0.761 0.758 - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
30. RPS11 ENSDARG00000053058 32 1.509 0.731 - - - - 0.778 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
31. RABL6 RABL6 1795 1.505 0.703 0.802 - - - - - - -
32. BX649458.1 BX649458.1 166 1.504 - 0.717 - - - 0.787 - - -
33. kcnc1a ENSDARG00000051852 317 1.504 0.729 - - - - 0.775 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
34. CPNE4 CPNE4 268 1.497 0.781 - - - - 0.716 - - -
35. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.496 0.741 0.755 - - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
36. tmem130 ENSDARG00000103789 756 1.49 0.765 - - - - 0.725 - - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
37. pmela ENSDARG00000091298 5179 1.482 - 0.746 - - - - 0.736 - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
38. opn5 ENSDARG00000070110 18 1.474 0.731 - - - - 0.743 - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
39. lhfpl4a ENSDARG00000111810 206 1.473 0.715 0.758 - - - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
40. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.47 - 0.735 - - - - - 0.735 - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
41. iqcb1 ENSDARG00000101032 310 1.465 0.729 - - - - 0.736 - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
42. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.457 - - - - - 0.732 0.725 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
43. fzd8a ENSDARG00000045444 802 1.455 - 0.753 - - - - 0.702 - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
44. necap1 ENSDARG00000020798 612 1.446 0.718 0.728 - - - - - - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
45. slc1a3a ENSDARG00000104431 9888 1.441 0.740 0.701 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
46. mrps34 ENSDARG00000057910 2007 1.44 - - - - - 0.724 0.716 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
47. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 1.438 - - - - - 0.718 - 0.720 - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
48. C19H9orf91 C19H9orf91 249 1.438 0.709 - - - - 0.729 - - -
49. rrp12 ENSDARG00000022410 2236 1.436 - 0.717 - - - - 0.719 - - ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
50. casq1b ENSDARG00000018105 2643 1.422 - 0.717 - - - - 0.705 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
51. CU633479.5 ENSDARG00000114818 1815 1.417 - - - - - 0.716 0.701 - -
52. SLC29A4 ENSDARG00000059690 470 0.945 0.945 - - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
53. cetn2 ENSDARG00000101510 541 0.934 0.934 - - - - - - - - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
54. PURA PURA 172 0.929 0.929 - - - - - - - -
55. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 0.921 0.921 - - - - - - - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
56. sox14 ENSDARG00000070929 352 0.92 0.920 - - - - - - - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
57. gria4a ENSDARG00000037496 88 0.914 0.914 - - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
58. DGKI 306 0.903 - - - - - 0.903 - - - diacylglycerol kinase, iota
59. CU929408.1 CU929408.1 714 0.902 - - - - - 0.902 - - -
60. GPR17 ENSDARG00000062030 713 0.9 0.900 - - - - - - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
61. aox3 aox3 399 0.9 0.900 - - - - - - - -
62. dffb ENSDARG00000009748 204 0.899 0.899 - - - - - - - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]
63. BSCL2 ENSDARG00000037008 689 0.897 0.897 - - - - - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
64. ddx55 ENSDARG00000009864 415 0.891 - - - - - 0.891 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
65. rasef ENSDARG00000076250 1359 0.884 0.884 - - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
66. GFRAL ENSDARG00000089709 167 0.882 - - - - - 0.882 - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
67. emc10 ENSDARG00000054793 2315 0.881 - - - - - - 0.881 - - ER membrane protein complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9045]
68. HEPHL1 HEPHL1 309 0.881 - - - - - 0.881 - - -
69. cuedc1b ENSDARG00000054748 1638 0.879 0.879 - - - - - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
70. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.877 0.877 - - - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
71. trmt1l ENSDARG00000042057 466 0.875 - - - - - 0.875 - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
72. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 0.874 - 0.874 - - - - - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
73. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.873 - - - - - - 0.873 - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
74. parp12b ENSDARG00000057974, ENSDARG00000115844 1435 0.871 - - - - - - 0.871 - - poly (ADP-ribose) polymerase family, member 12b [Source:ZFIN;Acc:ZDB-GENE-030131-2617]
75. mcm3_1 ENSDARG00000024204 467 0.868 - 0.868 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
76. si:dkey-246i21.1 197 0.868 - - - - - 0.868 - - - si:dkey-246i21.1, transcript variant X2
77. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.863 - - - - - - 0.863 - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
78. CU928222.1 ENSDARG00000097436 1662 0.862 - 0.862 - - - - - - -
79. akr1b1 ENSDARG00000006215 2511 0.861 0.861 - - - - - - - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
80. PTS ENSDARG00000045269 2185 0.86 0.860 - - - - - - - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
81. tmem35 ENSDARG00000052567 5685 0.859 - 0.859 - - - - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
82. ndufb11 ENSDARG00000043467 7495 0.859 - - - - - - 0.859 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
83. rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 0.858 - 0.858 - - - - - - - ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]
84. ndel1a ENSDARG00000010953 292 0.858 - - - - - 0.858 - - - nudE neurodevelopment protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040115-2]
85. si:ch73-367f21.6 ENSDARG00000089953 46 0.857 0.857 - - - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
86. rhoab ENSDARG00000094673 26 0.857 0.857 - - - - - - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
87. P2RY1 ENSDARG00000105281 45 0.857 0.857 - - - - - - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
88. hist2h3c ENSDARG00000094154 124 0.857 0.857 - - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
89. mrpl54 ENSDARG00000071468 2715 0.856 - - - - - - 0.856 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
90. CABZ01079764.1 CABZ01079764.1 12103 0.855 - 0.855 - - - - - - -
91. arntl1a ENSDARG00000006791 550 0.854 - - - - - - 0.854 - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
92. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.854 0.854 - - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
93. fscn2b ENSDARG00000074396 177 0.853 - - - - - 0.853 - - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
94. ankrd1a ENSDARG00000075263, ENSDARG00000110628, ENSDARG00000114111 252 0.851 - - - - - 0.851 - - - ankyrin repeat domain 1a (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-100405-1]
95. kcnd3 ENSDARG00000056101 324 0.848 - 0.848 - - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]
96. prdm4 ENSDARG00000017366 454 0.848 0.848 - - - - - - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
97. lrrtm1 ENSDARG00000052713 1041 0.848 0.848 - - - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
98. BX927064.1 BX927064.1 46 0.847 - - - - - 0.847 - - -
99. sox19b ENSDARG00000040266 532 0.847 - 0.847 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
100. nptx2a ENSDARG00000037794 127 0.846 - - - - - 0.846 - - - neuronal pentraxin 2a [Source:ZFIN;Acc:ZDB-GENE-060707-1]

There are 1146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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