Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mirlet7a-1

Gene Name Gene ID Reads Annotation
mirlet7a-1 105 microRNA let7a-1










Genes with expression patterns similar to mirlet7a-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mirlet7a-1 105 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA let7a-1
2. bbs7 ENSDARG00000059911 165 2.306 - 0.746 - - - 0.856 0.704 - - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
3. e4f1 ENSDARG00000038243 160 1.842 - 0.936 - - - 0.906 - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
4. nadl1.2 695 1.813 - 0.901 - - - 0.912 - - - neural adhesion molecule L1.2, transcript variant X1
5. parp6a ENSDARG00000042703 112 1.786 - 0.880 - - - 0.906 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
6. tmem19 414 1.737 0.907 0.830 - - - - - - - transmembrane protein 19
7. atp6ap1a ENSDARG00000041417 898 1.726 - 0.787 - - - 0.939 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
8. si:dkey-22o22.2 ENSDARG00000102445 149 1.709 - - 0.792 - - 0.917 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
9. grin2da ENSDARG00000086207 28 1.706 0.812 0.894 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
10. si:ch211-194k22.8 ENSDARG00000096711 1318 1.705 - 0.838 - - - 0.867 - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
11. rab6bb ENSDARG00000031343 1381 1.692 - 0.888 - - - 0.804 - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
12. FP102801.1_1 FP102801.1_1 238 1.689 - 0.769 - - - 0.920 - - -
13. mtx1a ENSDARG00000025500 275 1.68 0.942 - - - - 0.738 - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
14. HEPHL1 HEPHL1 309 1.676 0.774 0.902 - - - - - - -
15. TRIM35_4 TRIM35_4 63 1.674 0.774 0.900 - - - - - - -
16. kitlga ENSDARG00000070917 155 1.667 - 0.770 - - - 0.897 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
17. npnt ENSDARG00000018721 19 1.666 - 0.885 0.781 - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
18. si:ch211-278j3.3 ENSDARG00000020284 478 1.663 - 0.872 - - - 0.791 - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
19. scn1lab ENSDARG00000062744 155 1.657 - - 0.807 - - 0.850 - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
20. zgc:174708 zgc:174708 11 1.655 - 0.917 - - 0.738 - - - -
21. dcp1a ENSDARG00000100136 714 1.654 - 0.821 - - - 0.833 - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
22. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 1.654 - 0.846 - - - - 0.808 - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
23. ttc9b ENSDARG00000068421 251 1.651 - - - - - 0.828 0.823 - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
24. SLC5A6 SLC5A6 179 1.649 0.805 0.844 - - - - - - -
25. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1.644 - 0.910 - - 0.734 - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
26. ripk2 ENSDARG00000104290 71 1.637 - 0.762 - - - 0.875 - - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
27. C7H4orf48 C7H4orf48 1455 1.637 - 0.872 - - - 0.765 - - -
28. elk1 ENSDARG00000078066 414 1.632 - 0.703 - - - 0.929 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
29. arhgap27 ENSDARG00000104255 439 1.628 - 0.889 - - - 0.739 - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
30. st8sia5 ENSDARG00000036584 529 1.622 - 0.775 - - - 0.847 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
31. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.62 0.754 - - - - 0.866 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
32. si:ch211-220f16.2 ENSDARG00000007976 638 1.613 0.768 - - - - 0.845 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
33. BX005069.4 BX005069.4 61 1.605 - 0.830 0.775 - - - - - -
34. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.604 - 0.739 - - - 0.865 - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
35. si:dkey-51a16.9 ENSDARG00000039483 444 1.596 - 0.870 - - - 0.726 - - - si:dkey-51a16.9 [Source:ZFIN;Acc:ZDB-GENE-030616-560]
36. CABZ01100187.1 CABZ01100187.1 191 1.587 0.800 - - - - 0.787 - - -
37. scrt1a ENSDARG00000100821 2687 1.586 - 0.861 - - - - - 0.725 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
38. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 1.584 - 0.754 - - - 0.830 - - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
39. asnsd1 830 1.579 - 0.702 - - - 0.877 - - - asparagine synthetase domain containing 1, transcript variant X1
40. wnt11r ENSDARG00000014796 2860 1.577 - 0.809 - - - 0.768 - - - wingless-type MMTV integration site family, member 11, related [Source:ZFIN;Acc:ZDB-GENE-980526-249]
41. si:ch211-162i8.5 ENSDARG00000111716 76 1.576 - 0.743 - - - 0.833 - - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
42. itpa ENSDARG00000057529 104 1.575 - 0.856 - - 0.719 - - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
43. HELZ2_1 ENSDARG00000012600 53 1.573 - - - - - 0.869 0.704 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
44. CT990561.1 ENSDARG00000058284 566 1.561 - 0.754 - - - 0.807 - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
45. doc2d ENSDARG00000079962 76 1.541 - - 0.759 - - 0.782 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
46. sin3ab ENSDARG00000059812 2140 1.54 - 0.807 - - - 0.733 - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
47. angptl5 ENSDARG00000056630 203 1.536 - 0.701 - - - 0.835 - - - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
48. CABZ01113374.2 CABZ01113374.2 27 1.534 0.812 0.722 - - - - - - -
49. spata2 ENSDARG00000063250 501 1.534 - 0.739 - - - 0.795 - - - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
50. pidd pidd 86 1.525 0.793 - - - 0.732 - - - -
51. CR384099.1 ENSDARG00000089193 193 1.524 - 0.795 - - - 0.729 - - -
52. cog8 ENSDARG00000002798 229 1.524 - - - - - 0.737 0.787 - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
53. TULP3 TULP3 433 1.522 - - - - - 0.773 0.749 - -
54. C5H9orf172 C5H9orf172 65 1.52 - - 0.720 - - 0.800 - - -
55. CDH8 172 1.513 - - - - - 0.809 - 0.704 - cadherin 8
56. tgfbrap1 ENSDARG00000061508 504 1.511 - 0.722 - - - 0.789 - - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
57. MIER3_1 MIER3_1 756 1.508 - 0.774 - - - 0.734 - - -
58. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.507 - 0.765 - - - 0.742 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
59. FAM135B ENSDARG00000105121 207 1.503 0.782 - - - - 0.721 - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
60. dhrs1 ENSDARG00000054300, ENSDARG00000116842 555 1.49 - 0.761 - - - 0.729 - - - dehydrogenase/reductase (SDR family) member 1 [Source:ZFIN;Acc:ZDB-GENE-030616-591]
61. slc23a3 ENSDARG00000088891 47 1.473 0.765 0.708 - - - - - - - solute carrier family 23, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-714]
62. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.454 - 0.718 - - - 0.736 - - -
63. CABZ01038494.1 ENSDARG00000088258 908 1.45 0.748 - - - - 0.702 - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
64. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.447 - - 0.743 - - 0.704 - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
65. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.446 - 0.712 - - - 0.734 - - - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
66. zdhhc14 ENSDARG00000037069 479 1.441 - - - - - 0.730 0.711 - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
67. bmp2a ENSDARG00000013409 303 1.436 0.720 - - - - 0.716 - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
68. pmaip1 ENSDARG00000089307 236 1.425 - - - - - 0.718 0.707 - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
69. drd4-rs ENSDARG00000001912 45 0.994 0.994 - - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
70. ACOT12 ENSDARG00000054534 61 0.991 - 0.991 - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
71. add3b ENSDARG00000056250, ENSDARG00000114699 119 0.99 - 0.990 - - - - - - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
72. si:ch211-130m23.2 ENSDARG00000095136 121 0.984 0.984 - - - - - - - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
73. mettl21a ENSDARG00000012051 86 0.98 - 0.980 - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
74. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.977 0.977 - - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
75. PPFIA3 ENSDARG00000077053 310 0.971 - - - - - 0.971 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
76. naif1 ENSDARG00000062753 176 0.969 - - - - - 0.969 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
77. ITGAE ITGAE 53 0.969 - 0.969 - - - - - - -
78. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 0.969 - - - - - 0.969 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
79. BX470131.1 BX470131.1 86 0.967 - - - - - 0.967 - - -
80. MICU3_1 MICU3_1 51 0.965 - - - - - 0.965 - - -
81. zgc:92326 zgc:92326 94 0.965 0.965 - - - - - - - -
82. tmem5 1630 0.964 - - - - - 0.964 - - - transmembrane protein 5
83. VWA7 ENSDARG00000061462 816 0.963 - - - - - 0.963 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
84. cenpk ENSDARG00000039616 744 0.96 - - - - - 0.960 - - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
85. cyb5d1 ENSDARG00000056007 67 0.959 - 0.959 - - - - - - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
86. abhd14a ENSDARG00000058367 546 0.958 - - - - - 0.958 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
87. kcnj11l ENSDARG00000031438 369 0.958 - - - - - 0.958 - - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
88. PROCA1 ENSDARG00000069823 343 0.957 - - - - - 0.957 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
89. si:ch211-240g9.1 36 0.956 - - - - - 0.956 - - - si:ch211-240g9.1
90. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.956 - - - - - 0.956 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
91. xkr6 xkr6 286 0.955 - - - - - 0.955 - - -
92. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 0.955 - - - - - 0.955 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
93. C9H2orf69 C9H2orf69 148 0.954 - - - - - 0.954 - - -
94. actr5 ENSDARG00000098235 237 0.953 - - - - - 0.953 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
95. C5H3orf30 C5H3orf30 63 0.953 - - - - - 0.953 - - -
96. entpd2b ENSDARG00000044795 7 0.952 - - - - - 0.952 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
97. srpk1b ENSDARG00000031560 2079 0.951 - - - - - 0.951 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
98. SNX19 SNX19 350 0.951 - - - - - 0.951 - - -
99. prpf31 ENSDARG00000095904 526 0.951 - - - - - 0.951 - - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
100. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.95 0.950 - - - - - - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]

There are 1698 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA