Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir30b

Gene Name Gene ID Reads Annotation
mir30b 4 microRNA 30b










Genes with expression patterns similar to mir30b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir30b 4 5 1.000 1.000 - 1.000 1.000 - 1.000 - - microRNA 30b
2. BX324198.1 BX324198.1 12 3 - - - 1.000 1.000 - 1.000 - -
3. VSIG10L ENSDARG00000089237 12 2.905 0.905 - - - 1.000 - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
4. si:dkeyp-35e5.9 ENSDARG00000103527 24 2.789 0.866 1.000 - - - - 0.923 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
5. zgc:113425 ENSDARG00000026616 29 2 1.000 - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
6. si:dkey-233e3.5 si:dkey-233e3.5 7 2 - - - 1.000 1.000 - - - -
7. si:dkey-285e18.5 ENSDARG00000093665 5 2 - - - 1.000 1.000 - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
8. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 2 - 1.000 - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
9. socs1a ENSDARG00000038095 20 2 1.000 - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
10. EDN3 14 2 - 1.000 - - - - 1.000 - - endothelin 3
11. fam213ab 1 2 - 1.000 - - - - 1.000 - - family with sequence similarity 213, member Ab
12. si:dkey-3b8.4 si:dkey-3b8.4 13 2 1.000 - - - - - 1.000 - -
13. CR381673.2 ENSDARG00000103241 7 2 - 1.000 - - - - 1.000 - -
14. C12H17orf70 C12H17orf70 25 2 - 1.000 - - - - 1.000 - -
15. C1GALT1_1 C1GALT1_1 1 2 - 1.000 - 1.000 - - - - -
16. or111-9 ENSDARG00000092238 0 2 - - - 1.000 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
17. ZNF337_23 ZNF337_23 39 2 - 1.000 - - - - 1.000 - -
18. si:dkey-49n23.1 ENSDARG00000040920 3 2 - - - 1.000 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
19. klc4_1 ENSDARG00000086985 22 2 1.000 - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
20. ft2 ENSDARG00000109567 5 2 1.000 - - - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
21. CABZ01067072.1 CABZ01067072.1 17 2 1.000 - - 1.000 - - - - -
22. abcc13 ENSDARG00000062519 2 2 - - - 1.000 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
23. sftpba ENSDARG00000094708 2 2 - 1.000 - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
24. caps2 ENSDARG00000058486 4 2 1.000 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
25. prph2a ENSDARG00000038018 2 2 - 1.000 - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
26. BX927317.2 ENSDARG00000101263 4 2 - 1.000 - - 1.000 - - - -
27. lrp6 ENSDARG00000100143 1 2 - - - 1.000 - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
28. si:ch211-161m3.4 ENSDARG00000103375 10 2 - - - - 1.000 - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
29. BX569778.1 BX569778.1 36 2 1.000 - - 1.000 - - - - -
30. gabpb1 ENSDARG00000023659 26 2 1.000 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
31. FP103003.1_1 FP103003.1_1 6 2 1.000 - - - 1.000 - - - -
32. CU694319.1 CU694319.1 72 1.961 - 1.000 - - - - 0.961 - -
33. 5S_rRNA_1 5S_rRNA_1 5 1.941 0.941 - - - 1.000 - - - -
34. C6H21orf58 C6H21orf58 14 1.916 1.000 - - - - - 0.916 - -
35. crispld1a ENSDARG00000077275 7 1.916 - - - - 1.000 - 0.916 - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
36. dand5 ENSDARG00000036471 8 1.912 - - - 0.912 - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
37. si:ch1073-185p12.2 ENSDARG00000100199 7 1.881 - 1.000 - - - - 0.881 - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
38. CR854948.2 CR854948.2 4 1.859 - - - - 0.908 - 0.951 - -
39. BX005234.1 ENSDARG00000097761 3 1.858 - - - 1.000 0.858 - - - -
40. si:dkey-104n9.1 ENSDARG00000093042 41 1.858 0.858 - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
41. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1.854 - - - 1.000 0.854 - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
42. entpd2a.1 ENSDARG00000035506 14 1.854 - - - 1.000 - - 0.854 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
43. PACRG ENSDARG00000087556 7 1.85 - - - 1.000 - - 0.850 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
44. AL929220.1 ENSDARG00000103323 14 1.845 0.845 - - - - - 1.000 - -
45. si:ch73-59c19.1 ENSDARG00000091909 64 1.84 - 1.000 - - - - 0.840 - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
46. CABZ01081748.1 ENSDARG00000102139 31 1.834 - - - 1.000 - - 0.834 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
47. CU655961.3 ENSDARG00000106724 14 1.834 - 1.000 - - - - 0.834 - -
48. si:rp71-45g20.6 si:rp71-45g20.6 19 1.834 - 1.000 - - - - 0.834 - -
49. hnf4g ENSDARG00000071565 117 1.827 0.997 - - - - - 0.830 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
50. si:ch211-222k6.3 ENSDARG00000071578 127 1.826 - - - 1.000 - - 0.826 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
51. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
52. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1.805 1.000 0.805 - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
53. sumo2a ENSDARG00000104390 4 1.797 - - - - 0.797 - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
54. FOLR1 FOLR1 25 1.761 0.761 - - - - - 1.000 - -
55. capsla ENSDARG00000103521 277 1.759 0.860 - - - - - 0.899 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
56. si:dkey-14a7.4 si:dkey-14a7.4 5 1.748 - - - - 1.000 - 0.748 - -
57. si:dkey-114c15.5 ENSDARG00000095150 70 1.726 0.892 - - - - - 0.834 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
58. SNORD10 SNORD10 71 1.716 - 0.716 - - - - 1.000 - -
59. si:dkey-92j16.1 si:dkey-92j16.1 1 1.712 - 0.712 - - 1.000 - - - -
60. zgc:173770 ENSDARG00000076476 34 1.706 0.905 - - - - - 0.801 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
61. AL844567.1_1 AL844567.1_1 34 1.704 - 1.000 - - - - 0.704 - -
62. vwa1 ENSDARG00000075468 77 1.686 0.957 0.729 - - - - - - - von Willebrand factor A domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5921]
63. SLC28A2 SLC28A2 21 1.677 - 0.910 - - - - 0.767 - -
64. C14orf80 C14orf80 20 1.67 - 0.747 - - - - 0.923 - -
65. wdr65 wdr65 251 1.651 0.735 - - - - - 0.916 - -
66. mfsd4b ENSDARG00000079571 556 1.649 - 0.781 - - - - 0.868 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
67. si:dkey-249p7.4 ENSDARG00000096663 9 1.641 0.929 0.712 - - - - - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
68. AL954146.5 AL954146.5 202 1.636 0.921 - - - - - 0.715 - -
69. C5H9orf117 C5H9orf117 88 1.609 0.701 - - - - - 0.908 - -
70. ggt1b ENSDARG00000018342 49 1.609 0.898 - - - - - 0.711 - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
71. si:dkey-11c5.11 ENSDARG00000096637 130 1.602 0.743 - - - - - 0.859 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
72. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.594 0.732 0.862 - - - - - - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
73. si:ch73-367f21.5 ENSDARG00000089503 55 1.586 - 0.729 - - - - 0.857 - - si:ch73-367f21.5 [Source:ZFIN;Acc:ZDB-GENE-120214-29]
74. nphp4 ENSDARG00000069014 77 1.575 0.863 0.712 - - - - - - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
75. tfap2e ENSDARG00000008861 497 1.567 - 0.838 - - - - 0.729 - - transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
76. abhd6a ENSDARG00000060756 122 1.522 0.798 - - - - - 0.724 - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
77. ubxn10 ENSDARG00000052535 24 1.513 - 0.747 - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
78. tekt2 ENSDARG00000028973 160 1.485 0.779 0.706 - - - - - - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
79. ube2b ENSDARG00000026035 51 1.438 - 0.734 - - - - 0.704 - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
80. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 1.000 - - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
81. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
82. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
83. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
84. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
85. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
86. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - 1.000 - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
87. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
88. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
89. rhobtb2b ENSDARG00000089340 4 1 - - - 1.000 - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
90. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
91. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
92. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
93. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
94. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
95. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
96. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
97. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
98. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
99. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
100. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]

There are 1376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA