Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir301c

Gene Name Gene ID Reads Annotation
mir301c 84 microRNA 301c










Genes with expression patterns similar to mir301c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir301c 84 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA 301c
2. CT573494.2 CT573494.2 58 2.616 - 1.000 - - - 0.798 0.818 - -
3. LGALS8_1 LGALS8_1 29 2 - 1.000 - - - - 1.000 - -
4. btbd3b ENSDARG00000087517 107 1.966 - 1.000 - - - - - 0.966 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
5. elnb ENSDARG00000069017 744 1.867 0.903 - - - - - - 0.964 - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
6. SACS ENSDARG00000091042 15 1.858 - 1.000 - - - 0.858 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
7. chpfb ENSDARG00000078037 30 1.855 - - - - - 0.891 - 0.964 - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
8. MOV10L1 MOV10L1 21 1.849 - 1.000 - - - 0.849 - - -
9. PPFIA3 ENSDARG00000077053 310 1.823 - 1.000 - - - - - 0.823 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
10. LRP3 ENSDARG00000008485 1401 1.797 - 1.000 - - - - 0.797 - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
11. CCDC141 ENSDARG00000095675 94 1.786 - - - - - - 0.818 0.968 - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
12. fam175b fam175b 37 1.782 - 1.000 0.782 - - - - - -
13. kcnq1 ENSDARG00000059798 11 1.776 - - - - - - 0.818 - 0.958 potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
14. XKR7 ENSDARG00000026333 175 1.748 - 1.000 - - - - - - 0.748 XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
15. ZNF648 ENSDARG00000104823 194 1.745 - 1.000 - - - - - - 0.745 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
16. pappa2 ENSDARG00000076020 89 1.737 - 1.000 - - - - - - 0.737 pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
17. si:dkey-32m20.1 43 1.725 - 0.896 - - - 0.829 - - - si:dkey-32m20.1
18. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 1.724 - - - - - - - 0.945 0.779 solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
19. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1.722 0.722 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
20. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.718 0.718 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
21. SLC35D3 ENSDARG00000107442 12 1.718 0.718 - - - - - - - 1.000 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
22. ENSDARG00000032477 ENSDARG00000032477 18 1.709 - - - - - 0.891 0.818 - -
23. arnt ENSDARG00000021855, ENSDARG00000115999 32 1.703 - - - - - - 0.818 - 0.885 aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
24. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.702 - - - - - 0.739 - - 0.963 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
25. fem1a ENSDARG00000067966 11 1.694 - 0.704 - - - - - - 0.990 fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
26. dnajb13 ENSDARG00000043157 50 1.684 - - 0.911 - - 0.773 - - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
27. zgc:112001 ENSDARG00000078034 93 1.681 - - - - - - 0.888 - 0.793 zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
28. COL27A1 COL27A1 94 1.68 - 0.808 - - - 0.872 - - -
29. CSMD3 CSMD3 0 1.679 - - - - - - 0.711 0.968 -
30. atg9b ENSDARG00000055292 155 1.678 - - - - - 0.891 - 0.787 - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
31. si:rp71-1c10.11 ENSDARG00000096721 39 1.671 - - - - - - 0.709 0.962 - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
32. CABZ01078314.1 CABZ01078314.1 44 1.661 - - 0.770 - - 0.891 - - -
33. tdrd9 ENSDARG00000013453 22 1.649 - - - - - 0.831 0.818 - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
34. si:ch211-260m19.8 si:ch211-260m19.8 33 1.609 0.718 - - - - 0.891 - - -
35. si:rp71-26b20.1 si:rp71-26b20.1 11 1.609 0.718 - - - - 0.891 - - -
36. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.605 0.905 - - - 0.700 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
37. cx45.6 cx45.6 26 1.604 - 0.713 - - - 0.891 - - -
38. si:ch211-212g7.6 ENSDARG00000079369 707 1.601 - - 0.735 - - - - 0.866 - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
39. CABZ01026370.1 CABZ01026370.1 286 1.591 - 0.797 0.794 - - - - - -
40. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.577 - - 0.760 - - - - 0.817 - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
41. pou6f2 ENSDARG00000086362 135 1.557 - - - - - 0.780 - 0.777 - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
42. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.552 - - - - 0.734 - 0.818 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
43. uts1 ENSDARG00000014927 35 1.549 - 0.731 - - - - 0.818 - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
44. FOXJ3 ENSDARG00000075774 197 1.541 - - - - - - 0.796 - 0.745 forkhead box J3 [Source:ZFIN;Acc:ZDB-GENE-101005-1]
45. tspan5b ENSDARG00000070449 1056 1.54 - - 0.710 - - - - 0.830 - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
46. r3hdml ENSDARG00000030650 133 1.538 - - - - - - 0.802 - 0.736 R3H domain containing-like [Source:ZFIN;Acc:ZDB-GENE-090313-275]
47. zgc:136493 ENSDARG00000029259 132 1.535 - 0.818 - - - 0.717 - - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
48. sumf2 ENSDARG00000069497 51 1.511 - 0.754 - - 0.757 - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
49. zgc:194621 ENSDARG00000074696 85 1.506 0.732 0.774 - - - - - - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
50. NWD1 ENSDARG00000076110 3 1.498 0.718 - - - - 0.780 - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
51. ube2g2 ENSDARG00000025404 1774 1.489 - - - - - - - 0.787 0.702 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
52. CR925880.1 CR925880.1 196 1.476 - - - - - 0.776 0.700 - -
53. si:dkey-225n22.4 ENSDARG00000077245 86 1.472 - 0.713 - - - 0.759 - - - si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
54. spp1 ENSDARG00000044276 34 1.472 0.718 - - - - 0.754 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
55. si:ch211-181d7.3 ENSDARG00000068621 87 1.47 - - 0.755 - - 0.715 - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
56. BX548047.2 ENSDARG00000115500 17 1.465 0.718 - - - - 0.747 - - -
57. tbx6l 87 1.464 0.755 0.709 - - - - - - - T-box 6, like, transcript variant X2
58. CR847510.1 CR847510.1 629 1.464 - - - - - 0.702 0.762 - -
59. zgc:174224_2 ENSDARG00000093875 22 1.449 0.718 0.731 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
60. zgc:174268 ENSDARG00000076807 250 1.434 - - - - - 0.719 - - 0.715 zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
61. syngr3b ENSDARG00000025034 290 1.428 - 0.719 - - - - 0.709 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
62. rdh8b ENSDARG00000105060 183 1.427 - 0.713 - - - - - - 0.714 retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
63. pla2g4a pla2g4a 7 1.422 0.718 0.704 - - - - - - -
64. EHD2 EHD2 23 1.418 0.718 - - - - - 0.700 - -
65. si:ch211-209j10.6 ENSDARG00000093317 126 1.404 - - - - - - 0.703 - 0.701 si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
66. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
67. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
68. asb18 ENSDARG00000012948, ENSDARG00000114572 22 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 18 [Source:ZFIN;Acc:ZDB-GENE-090313-391]
69. selp ENSDARG00000042138, ENSDARG00000096787 3 1 - 1.000 - - - - - - - selectin P [Source:ZFIN;Acc:ZDB-GENE-110107-2]
70. spred3 ENSDARG00000040358 134 1 - 1.000 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
71. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
72. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
73. dusp3b ENSDARG00000060130 3 1 - 1.000 - - - - - - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
74. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
75. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
76. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
77. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
78. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
79. BTBD17 BTBD17 53 1 - 1.000 - - - - - - -
80. BX005305.4 ENSDARG00000114385 6 1 - 1.000 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
81. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
82. ARX ARX 71 1 - 1.000 - - - - - - -
83. si:dkey-216e24.4 si:dkey-216e24.4 14 1 - - - - - - - - 1.000
84. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1 - 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
85. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
86. zdhhc18a ENSDARG00000069807 8 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
87. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
88. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1 - 1.000 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
89. si:dkey-78a14.4 ENSDARG00000036066 17 1 - 1.000 - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
90. bsk146 ENSDARG00000099069 274 1 - 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
91. CABZ01038313.1 CABZ01038313.1 79 1 - 1.000 - - - - - - -
92. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
93. si:dkey-103i16.2 si:dkey-103i16.2 492 1 - 1.000 - - - - - - -
94. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
95. mocs1 ENSDARG00000078479 1 1 - 1.000 - - - - - - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
96. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
97. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
98. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
99. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
100. si:dkey-3d4.1 si:dkey-3d4.1 37 1 - 1.000 - - - - - - -

There are 1378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA