Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir21-1

Gene Name Gene ID Reads Annotation
mir21-1 606 microRNA 21-1










Genes with expression patterns similar to mir21-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir21-1 606 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA 21-1
2. mycn ENSDARG00000006837 1616 1.69 - - - - - 0.780 0.910 - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
3. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.591 - - - - - - 0.794 0.797 - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
4. dnttip2 ENSDARG00000057648 2381 1.57 - 0.780 - - - - - 0.790 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
5. adi1 ENSDARG00000020448 1402 1.563 - - - - - - 0.828 0.735 - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
6. dachc ENSDARG00000003142, ENSDARG00000109556 513 1.561 - - - - - - 0.775 0.786 - dachshund c [Source:ZFIN;Acc:ZDB-GENE-020402-5]
7. idh3g ENSDARG00000023648 4877 1.552 - 0.723 - - - - - 0.829 - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
8. fam86a fam86a 174 1.549 - - - - - - 0.711 0.838 -
9. stxbp3 ENSDARG00000008142 2604 1.544 - 0.739 - - - - - 0.805 - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
10. znrd1 ENSDARG00000036070 684 1.529 0.713 - - - - - - 0.816 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
11. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.511 - - - - - - 0.719 0.792 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
12. slc25a39 ENSDARG00000007449 630 1.505 - - - - - - 0.729 0.776 - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
13. TMEM71 TMEM71 696 1.476 - 0.731 - - - - - 0.745 -
14. rfc2 ENSDARG00000014274 1533 1.473 - 0.713 - - - - - 0.760 - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
15. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.471 - - - - - 0.729 0.742 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
16. pho ENSDARG00000035133 670 1.466 - - - - - 0.724 0.742 - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
17. foxf2a ENSDARG00000017195 345 1.438 0.707 - - - - 0.731 - - - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
18. narfl ENSDARG00000062216 768 0.966 - - - - - - - 0.966 - nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
19. ttk ENSDARG00000041361 3911 0.952 - - - - - - - 0.952 - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
20. aplnrb ENSDARG00000036670 546 0.929 - - - - - - - 0.929 - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
21. snx7 ENSDARG00000105185 2977 0.928 - - - - - - - 0.928 - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
22. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.926 - - - - - - - 0.926 - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
23. cbx8b ENSDARG00000098771, ENSDARG00000110903, ENSDARG00000114315 455 0.924 - - - - - - - 0.924 - chromobox homolog 8b [Source:ZFIN;Acc:ZDB-GENE-050522-325]
24. foxj1a ENSDARG00000101919 1095 0.924 - - - - - - - 0.924 - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
25. taf5 ENSDARG00000018325 1363 0.917 - - - - - - - 0.917 - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
26. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.914 - - - - - - - 0.914 - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
27. depdc7 232 0.906 - - - - - - 0.906 - - DEP domain containing 7, transcript variant X1
28. cbr1l ENSDARG00000021149 1934 0.904 - - - - - - - 0.904 - carbonyl reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9642]
29. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 0.904 - - - - - - - 0.904 - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
30. CU181898.3 CU181898.3 440 0.902 - - - - - - - 0.902 -
31. MAP1S_1 MAP1S_1 1117 0.9 - - - - - - - 0.900 -
32. rnd3a ENSDARG00000076799 4705 0.895 - - - - - - - 0.895 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
33. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.89 - - - - - - 0.890 - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
34. lrwd1 ENSDARG00000035147 464 0.888 - - - - - - 0.888 - - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
35. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 0.885 - - - - - - 0.885 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
36. tmem251 ENSDARG00000042341 1102 0.884 - - - - - - 0.884 - - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
37. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 0.879 - - - - - - 0.879 - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
38. TMEM66 TMEM66 487 0.876 - - - - - - 0.876 - -
39. urad ENSDARG00000071579, ENSDARG00000115541 46 0.858 - - - - - - 0.858 - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
40. plxnb1b ENSDARG00000017211 4676 0.857 - - - - - - - 0.857 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
41. RNPEPL1 ENSDARG00000007813 557 0.856 - - - - - - 0.856 - - arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
42. siae ENSDARG00000040527, ENSDARG00000111850 186 0.851 - - - - - - - 0.851 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
43. lingo4b ENSDARG00000078527 235 0.847 - - - - - - - 0.847 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
44. gtf3c3 ENSDARG00000043247 202 0.847 - - - - - - - 0.847 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
45. si:dkey-15h14.4 si:dkey-15h14.4 118 0.847 - - - - - - - 0.847 -
46. CR942805.1 CR942805.1 94 0.846 - - - - - - - 0.846 -
47. rgs9bp ENSDARG00000009466 41 0.846 - - - - - - - 0.846 - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
48. TMEM246 ENSDARG00000061553 168 0.846 - - - - - - 0.846 - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
49. rnf41 ENSDARG00000036831, ENSDARG00000111636 872 0.846 - - - - - - - 0.846 - ring finger protein 41 [Source:ZFIN;Acc:ZDB-GENE-040426-2920]
50. znf740 znf740 2458 0.846 - - - - - - - 0.846 -
51. ftr29 ENSDARG00000075355 172 0.846 - - - - - - - 0.846 - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
52. zdhhc3 zdhhc3 152 0.846 - - - - - - - 0.846 -
53. topbp1 ENSDARG00000059322 241 0.846 - - - - - - - 0.846 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
54. st6galnac1.2 ENSDARG00000043816 51 0.845 - - - - - - - 0.845 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
55. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 0.845 - - - - - - - 0.845 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
56. lrit2 ENSDARG00000030626 69 0.845 - - - - - - - 0.845 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
57. slc25a40 ENSDARG00000015856 359 0.844 - - - - - - - 0.844 - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
58. GRIK3 ENSDARG00000077715 178 0.844 - - - - - - - 0.844 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
59. adcy1b ENSDARG00000088634 44 0.844 - - - - - - - 0.844 - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
60. cep135 ENSDARG00000002991 164 0.844 - - - - - - - 0.844 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
61. cabp2b ENSDARG00000052277 119 0.844 - - - - - - - 0.844 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
62. zgc:174862 ENSDARG00000077571 201 0.844 - - - - - - 0.844 - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
63. ZNF337_21 ZNF337_21 53 0.844 - - - - - - - 0.844 -
64. txndc11 ENSDARG00000101291 589 0.844 - - - - - - - 0.844 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
65. syt5b ENSDARG00000011640 70 0.844 - - - - - - - 0.844 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
66. si:ch211-57i17.2 ENSDARG00000093354 58 0.844 - - - - - - - 0.844 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
67. CABZ01027547.1 CABZ01027547.1 128 0.844 - - - - - - - 0.844 -
68. gnat2 ENSDARG00000042529 112 0.843 - - - - - - - 0.843 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
69. si:ch211-76l23.6 si:ch211-76l23.6 68 0.843 - - - - - - - 0.843 -
70. obfc1 obfc1 156 0.842 - - - - - - - 0.842 -
71. scrn2 ENSDARG00000043497 204 0.842 - - - - - - - 0.842 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
72. ENSDARG00000089986 ENSDARG00000089986 308 0.842 - - - - - - - 0.842 -
73. gtf3c2 ENSDARG00000004574 153 0.842 - - - - - - - 0.842 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
74. cplx4c ENSDARG00000094889 253 0.842 - - - - - - - 0.842 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
75. zgc:112001 ENSDARG00000078034 93 0.842 - - - - - - - 0.842 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
76. chsy3 ENSDARG00000069472 271 0.841 - - - - - - - 0.841 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
77. il21r il21r 74 0.841 - - - - - - - 0.841 -
78. fra10ac1 ENSDARG00000102615 425 0.841 - - - - - - - 0.841 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
79. XXYLT1 ENSDARG00000088799 193 0.841 - - - - - - - 0.841 - xyloside xylosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-120521-2]
80. ppm1la ENSDARG00000063218 2142 0.841 - - - - - - - 0.841 - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
81. lnx2b ENSDARG00000071478 654 0.841 - - - - - - - 0.841 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
82. foxn2b ENSDARG00000045105, ENSDARG00000112523 525 0.841 - - - - - - 0.841 - - forkhead box N2b [Source:ZFIN;Acc:ZDB-GENE-050417-1]
83. ift140 ENSDARG00000031886 573 0.841 - - - - - - 0.841 - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
84. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 0.841 - - - - - - - 0.841 - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
85. tmem145 ENSDARG00000088342 183 0.84 - - - - - - - 0.840 - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
86. WIZ WIZ 1188 0.84 - - - - - - - 0.840 -
87. nkd1 ENSDARG00000020053 4450 0.84 - - - - - - - 0.840 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
88. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.84 - - - - - - 0.840 - - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
89. slc35b1_1 ENSDARG00000038213 194 0.84 - - - - - - - 0.840 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
90. FBXO48 ENSDARG00000086184 110 0.84 - - - - - - - 0.840 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
91. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 0.84 - - - - - - - 0.840 - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
92. gucy1b3 92 0.84 - - - - - - - 0.840 - guanylate cyclase 1, soluble, beta 3
93. ogfr ENSDARG00000037837 1001 0.84 - - - - - - - 0.840 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
94. si:dkey-170k13.3 si:dkey-170k13.3 397 0.839 - - - - - - - 0.839 -
95. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.839 - - - - - - - 0.839 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
96. C2H1orf27 245 0.838 - - - - - - - 0.838 - c2h1orf27 homolog (H. sapiens), transcript variant X1
97. CABZ01066957.1 CABZ01066957.1 161 0.838 - - - - - - - 0.838 -
98. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.838 - - - - - - - 0.838 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
99. bag5 ENSDARG00000017316 195 0.838 - - - - - - - 0.838 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
100. litaf ENSDARG00000103483 217 0.838 - - - - - - 0.838 - - lipopolysaccharide-induced TNF factor [Source:ZFIN;Acc:ZDB-GENE-040704-23]

There are 641 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA