Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir199-3

Gene Name Gene ID Reads Annotation
mir199-3 mir199-3 826










Genes with expression patterns similar to mir199-3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir199-3 mir199-3 826 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ADAMTSL3 ENSDARG00000027903 278 2.247 - 0.751 - - - 0.753 0.743 - - ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
3. ube2j1 ENSDARG00000033489 497 1.719 - - - - - - 0.849 0.870 - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
4. habp2 ENSDARG00000057498 75 1.693 - 0.854 - - - - 0.839 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
5. BICD2 ENSDARG00000075571 401 1.692 - 0.799 - - - - 0.893 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
6. fam46a fam46a 92 1.633 - 0.816 - - - - 0.817 - -
7. si:dkeyp-19e1.3 ENSDARG00000051836 531 1.596 - 0.739 - - - - 0.857 - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
8. pnpo ENSDARG00000017612, ENSDARG00000109509 570 1.592 - 0.810 - - - - 0.782 - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
9. cep72 ENSDARG00000105258 344 1.57 - 0.791 - - - - 0.779 - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
10. C14H4orf29 C14H4orf29 155 1.559 - 0.800 - - - - 0.759 - -
11. cirh1a 767 1.548 0.744 - - - - - 0.804 - - cirrhosis, autosomal recessive 1A (cirhin), transcript variant X1
12. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 1.532 - - - - - - 0.829 0.703 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
13. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 1.528 - - 0.713 - - 0.815 - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
14. dip2c dip2c 248 1.517 - - - - - - 0.811 0.706 -
15. si:dkeyp-104f11.6 ENSDARG00000089158 89 1.496 0.748 - - - - - 0.748 - - si:dkeyp-104f11.6 [Source:ZFIN;Acc:ZDB-GENE-130531-1]
16. CABZ01081148.1 CABZ01081148.1 789 1.477 - - - - - 0.724 0.753 - -
17. cdan1 ENSDARG00000042261 658 1.454 - - - - - 0.752 - 0.702 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
18. ppm1ab ENSDARG00000043250 772 0.934 - - - - - - - 0.934 - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
19. MFSD3 MFSD3 407 0.927 - - - - - - 0.927 - -
20. acvr1l ENSDARG00000014986 1239 0.923 - - - - - - 0.923 - - activin A receptor, type 1 like [Source:ZFIN;Acc:ZDB-GENE-990415-9]
21. CCDC141 ENSDARG00000095675 94 0.908 - 0.908 - - - - - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
22. npas3b npas3b 1446 0.898 - 0.898 - - - - - - -
23. FAM188B FAM188B 145 0.897 - - - - - - 0.897 - -
24. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.893 - - - - - - - 0.893 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
25. C3H16orf72 C3H16orf72 2059 0.892 - - - - - - - 0.892 -
26. dph5 ENSDARG00000100242, ENSDARG00000115537 537 0.892 - - - - - - 0.892 - - diphthamide biosynthesis 5 [Source:ZFIN;Acc:ZDB-GENE-041114-85]
27. si:ch211-193e13.5 ENSDARG00000052656 61 0.892 - - - - - - 0.892 - - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
28. cyp2p10 ENSDARG00000042990 176 0.892 - 0.892 - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
29. clybl ENSDARG00000029729 690 0.891 - 0.891 - - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
30. RB1CC1 ENSDARG00000076559 2771 0.89 - - - - - - - 0.890 - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
31. BX324003.1 ENSDARG00000096499 50 0.888 - 0.888 - - - - - - -
32. LYAR ENSDARG00000098507 1506 0.888 - - - - - - 0.888 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
33. ANGEL1 ENSDARG00000077567 38 0.888 - 0.888 - - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
34. SPA17 ENSDARG00000069361 141 0.887 - - - - - - 0.887 - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
35. CU638737.1 CU638737.1 17 0.887 - 0.887 - - - - - - -
36. vcpip1 ENSDARG00000060177 56 0.887 - 0.887 - - - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
37. NAV1_1 NAV1_1 35 0.887 - 0.887 - - - - - - -
38. ttll3 ENSDARG00000053728 7 0.887 - 0.887 - - - - - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
39. tmem160 ENSDARG00000069649 587 0.884 - - - - - - 0.884 - - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
40. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.883 - 0.883 - - - - - - - adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
41. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 0.879 - - - - - - 0.879 - - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
42. adam19b ENSDARG00000067545 162 0.879 - - - - - - 0.879 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
43. alg11 ENSDARG00000031202, ENSDARG00000110001 308 0.878 - - - - - - - 0.878 - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
44. TTC17 ENSDARG00000044812 124 0.878 - 0.878 - - - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
45. pik3cg ENSDARG00000017757 157 0.878 - 0.878 - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
46. fbxw2 ENSDARG00000009745 618 0.876 - - - - - - 0.876 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
47. CT867948.2 CT867948.2 131 0.876 - - - - - - 0.876 - -
48. poln ENSDARG00000103961, ENSDARG00000113911 57 0.876 - 0.876 - - - - - - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
49. ERC1 ENSDARG00000076014 10 0.876 - 0.876 - - - - - - - ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]
50. ap2m1b ENSDARG00000033899 317 0.876 - - - - - - 0.876 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
51. ttc25_1 ENSDARG00000058140 32 0.876 - 0.876 - - - - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
52. myb ENSDARG00000053666, ENSDARG00000114024 58 0.876 - 0.876 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
53. vps13d ENSDARG00000017986 183 0.876 - 0.876 - - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
54. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.876 - 0.876 - - - - - - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
55. cfp ENSDARG00000094451 211 0.876 - 0.876 - - - - - - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
56. AAK1 AAK1 3 0.876 - 0.876 - - - - - - -
57. LRTM1 ENSDARG00000098742 21 0.876 - 0.876 - - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
58. grna ENSDARG00000004954 189 0.876 - 0.876 - - - - - - - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
59. si:ch211-220i18.4 ENSDARG00000030262 10 0.876 - 0.876 - - - - - - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
60. si:dkey-29n10.3 si:dkey-29n10.3 66 0.876 - 0.876 - - - - - - -
61. si:ch211-238e22.4 ENSDARG00000094500 78 0.876 - 0.876 - - - - - - - si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]
62. ncl1 2835 0.875 - - - - - - - 0.875 - nicalin, transcript variant X3
63. si:dkey-14o1.18 si:dkey-14o1.18 23 0.874 - 0.874 - - - - - - -
64. sod1 ENSDARG00000043848 1514 0.873 - - - - - - 0.873 - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
65. CABZ01065246.2 CABZ01065246.2 45 0.873 - 0.873 - - - - - - -
66. RAB43 ENSDARG00000059404 170 0.873 - - - - - - 0.873 - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
67. zgc:171599 ENSDARG00000044847 275 0.872 - - - - - - 0.872 - - zgc:171599 [Source:ZFIN;Acc:ZDB-GENE-080219-33]
68. papss2a ENSDARG00000071021, ENSDARG00000110734, ENSDARG00000112597 49 0.871 - 0.871 - - - - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2a [Source:ZFIN;Acc:ZDB-GENE-061110-85]
69. ddx27 ENSDARG00000091831 1471 0.87 - - - - - - - 0.870 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
70. si:dkey-265k11.2 si:dkey-265k11.2 44 0.869 - - - - - - 0.869 - -
71. sox4b ENSDARG00000098834 1634 0.869 - - - - - - 0.869 - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
72. si:ch211-162i8.5 ENSDARG00000111716 76 0.868 - - - - - - 0.868 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
73. pik3c2a ENSDARG00000060841 785 0.868 - - - - - - 0.868 - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-030328-39]
74. otud3 ENSDARG00000022648 263 0.868 - - - - - - 0.868 - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
75. grm4 ENSDARG00000040156 342 0.867 - 0.867 - - - - - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
76. znf704 ENSDARG00000061718, ENSDARG00000115892 160 0.867 - - - - - - 0.867 - - zinc finger protein 704 [Source:ZFIN;Acc:ZDB-GENE-060503-775]
77. ENSDARG00000089797 ENSDARG00000089797 50 0.867 - - - - - - 0.867 - -
78. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.867 - - - - - - 0.867 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
79. enosf1 ENSDARG00000038359 209 0.867 - - - - - - 0.867 - - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
80. ttc4 ENSDARG00000044405, ENSDARG00000117012 453 0.867 - - - - - - 0.867 - - tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]
81. snx13 ENSDARG00000013828 684 0.866 - - - - - - 0.866 - - sorting nexin 13 [Source:ZFIN;Acc:ZDB-GENE-050306-12]
82. mlh1 ENSDARG00000025948 130 0.865 - 0.865 - - - - - - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
83. wu:fb11h05 wu:fb11h05 126 0.865 - 0.865 - - - - - - -
84. hivep3b ENSDARG00000037154 114 0.864 - - - - - - 0.864 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
85. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 0.864 - - - - - - 0.864 - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
86. cdk10 ENSDARG00000034256 166 0.864 - - - - - - 0.864 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
87. mettl6 ENSDARG00000070085 366 0.863 - - - - - - 0.863 - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
88. btbd3a ENSDARG00000005544 595 0.863 - 0.863 - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
89. zgc:77151 ENSDARG00000054307 120 0.863 - - - - - - 0.863 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
90. tescb ENSDARG00000030839 195 0.862 - 0.862 - - - - - - - tescalcin b [Source:ZFIN;Acc:ZDB-GENE-040426-1903]
91. si:dkey-242e21.3 ENSDARG00000075723 77 0.861 - 0.861 - - - - - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
92. zfpm2a ENSDARG00000040123 46 0.861 - 0.861 - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
93. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 0.861 - - - - - - - 0.861 - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
94. zgc:56628 ENSDARG00000110020 34 0.861 - 0.861 - - - - - - - zgc:56628 [Source:ZFIN;Acc:ZDB-GENE-040426-1099]
95. lrrcc1 ENSDARG00000078535 118 0.86 - 0.860 - - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
96. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.86 - 0.860 - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
97. crtac1a ENSDARG00000059826 22 0.86 - - - - - - 0.860 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
98. hsd17b3 ENSDARG00000023287, ENSDARG00000115935, ENSDARG00000116671 134 0.859 0.859 - - - - - - - - hydroxysteroid (17-beta) dehydrogenase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1339]
99. arl16 ENSDARG00000059498, ENSDARG00000110386 229 0.859 - 0.859 - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
100. aldh3a2a ENSDARG00000028259 591 0.858 - - - - - - 0.858 - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]

There are 876 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA