Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir199-2

Gene Name Gene ID Reads Annotation
mir199-2 mir199-2 38










Genes with expression patterns similar to mir199-2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir199-2 mir199-2 38 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CU693477.1 CU693477.1 7 1.949 - 1.000 0.949 - - - - - -
3. wdr4 ENSDARG00000090581 42 1.907 - 1.000 - - - 0.907 - - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
4. CABZ01044048.1 ENSDARG00000011463 20 1.906 0.906 1.000 - - - - - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
5. b2m ENSDARG00000053136 215 1.905 0.959 - 0.946 - - - - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
6. si:busm1-180g5.7 si:busm1-180g5.7 15 1.894 1.000 0.894 - - - - - - -
7. batf ENSDARG00000011818 2 1.862 - 1.000 - - 0.862 - - - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
8. SLC16A7 ENSDARG00000098258 4 1.862 - 1.000 - - 0.862 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
9. CABZ01031170.1 CABZ01031170.1 137 1.814 0.920 - - - - - 0.894 - -
10. alkbh2 ENSDARG00000059856, ENSDARG00000115064 97 1.812 1.000 0.812 - - - - - - - alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-060526-327]
11. kctd3 ENSDARG00000060854 82 1.81 0.958 - - - - 0.852 - - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
12. ANGEL1 ENSDARG00000077567 38 1.796 - 0.906 - - - 0.890 - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
13. ddx43 ENSDARG00000022614 48 1.789 - - - - - 0.857 0.932 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
14. gpr55a ENSDARG00000043447 12 1.786 1.000 - - - - - - - 0.786 G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
15. prdm2b ENSDARG00000076451 97 1.777 - - 0.893 - - 0.884 - - - PR domain containing 2, with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-080613-3]
16. odf3l2 36 1.777 - 0.889 0.888 - - - - - - outer dense fiber of sperm tails 3-like 2
17. EHD2 EHD2 23 1.776 1.000 - - - - 0.776 - - -
18. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 1.772 0.878 0.894 - - - - - - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
19. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.771 - 0.885 - - - 0.886 - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
20. ccny ENSDARG00000063677 66 1.771 - 0.894 - - - - 0.877 - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
21. rfxank ENSDARG00000016730 12 1.77 - 1.000 - - 0.770 - - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
22. ppil6 ENSDARG00000042157 45 1.762 1.000 - - - - - 0.762 - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
23. CABZ01024770.1 CABZ01024770.1 150 1.762 0.878 - - - - 0.884 - - -
24. RFESD_2 RFESD_2 29 1.755 - - - - 0.865 0.890 - - -
25. gc3 31 1.751 - 1.000 - - 0.751 - - - - guanylyl cyclase 3, transcript variant X2
26. wu:fb11h05 wu:fb11h05 126 1.732 0.924 0.808 - - - - - - -
27. FAM132B FAM132B 39 1.726 - 1.000 - - - - 0.726 - -
28. TRIM35_11 TRIM35_11 23 1.714 1.000 0.714 - - - - - - -
29. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.697 - 0.882 0.815 - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
30. si:dkey-11c5.11 ENSDARG00000096637 130 1.688 - - 0.881 - - - 0.807 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
31. gem ENSDARG00000029112 138 1.675 0.956 - - - - - 0.719 - - GTP binding protein overexpressed in skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-060825-251]
32. RP1L1 RP1L1 15 1.673 0.783 - - - - 0.890 - - -
33. GPR153 ENSDARG00000087601 48 1.633 - 0.885 - - 0.748 - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
34. dlx1a ENSDARG00000013125 142 1.631 - - - - 0.752 0.879 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
35. APOLD1_1 APOLD1_1 590 1.626 - - 0.776 - - - 0.850 - -
36. si:dkey-243i1.1 ENSDARG00000034227 257 1.615 - - 0.807 - - 0.808 - - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
37. telo2 ENSDARG00000000830, ENSDARG00000111572 241 1.615 - - 0.890 - - 0.725 - - - TEL2, telomere maintenance 2, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061103-523]
38. faim2a ENSDARG00000038784 39 1.613 - - - - 0.752 0.861 - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
39. apex2 ENSDARG00000008472 39 1.589 - 0.809 0.780 - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
40. ZNF135_5 ZNF135_5 73 1.588 0.741 - - - - 0.847 - - -
41. si:ch211-259i2.2 si:ch211-259i2.2 45 1.577 - - - - 0.862 0.715 - - -
42. fads2 ENSDARG00000019532 152 1.567 - - - - 0.706 0.861 - - - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
43. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.557 - - - - - 0.816 0.741 - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
44. tbx20 ENSDARG00000005150 335 1.544 - 0.798 - - - 0.746 - - - T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
45. fadd ENSDARG00000103021 142 1.536 - 0.742 - - - 0.794 - - - Fas (tnfrsf6)-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-070606-3]
46. si:ch73-389k6.1 ENSDARG00000103186 296 1.524 - - 0.748 - - - 0.776 - - si:ch73-389k6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-408]
47. WIZ WIZ 1188 1.522 - - 0.794 - - - 0.728 - -
48. PIGG PIGG 106 1.518 - 0.809 0.709 - - - - - -
49. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 1.51 0.772 - - - - 0.738 - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
50. CR387997.1 CR387997.1 190 1.505 - 0.801 - - - 0.704 - - -
51. pop5 ENSDARG00000053452 1347 1.495 - - 0.728 - - - 0.767 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
52. PTP4A2 PTP4A2 185 1.481 - - - - - 0.721 0.760 - -
53. si:dkey-233e3.1 si:dkey-233e3.1 7 1.477 - - - 0.768 0.709 - - - -
54. FASTKD5 181 1.457 0.755 - 0.702 - - - - - - FAST kinase domains 5
55. xrcc5 ENSDARG00000099298 835 1.428 - - - 0.724 - - 0.704 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
56. st8sia7.1 ENSDARG00000054211 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
57. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - 1.000 - - - - - - -
58. CR354382.1 CR354382.1 42 1 - 1.000 - - - - - - -
59. GBF1 ENSDARG00000027016 30 1 - 1.000 - - - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
60. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - 1.000 - - - - - - -
61. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - 1.000 - - - - - - -
62. KYNU ENSDARG00000099546 55 1 1.000 - - - - - - - - kynureninase [Source:ZFIN;Acc:ZDB-GENE-120215-204]
63. myo7ab ENSDARG00000044632 1 1 - 1.000 - - - - - - - myosin VIIAb [Source:ZFIN;Acc:ZDB-GENE-091110-4]
64. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
65. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
66. TMEM132B TMEM132B 2 1 - 1.000 - - - - - - -
67. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
68. AL844186.1 ENSDARG00000114351 41 1 - 1.000 - - - - - - -
69. ZAN ZAN 11 1 - 1.000 - - - - - - -
70. NETO2_1 NETO2_1 15 1 - 1.000 - - - - - - -
71. zak ENSDARG00000006978, ENSDARG00000044615 80 1 1.000 - - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
72. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1 - 1.000 - - - - - - -
73. PPP2R2B PPP2R2B 257 1 - 1.000 - - - - - - -
74. shisa9 shisa9 35 1 - 1.000 - - - - - - -
75. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - 1.000 - - - - - - -
76. si:dkey-13d5.1 si:dkey-13d5.1 3 1 1.000 - - - - - - - -
77. slc35g2a ENSDARG00000056262 52 1 - 1.000 - - - - - - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
78. ANKFN1 ENSDARG00000060941 1 1 - 1.000 - - - - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
79. dok1a ENSDARG00000078108 9 1 - 1.000 - - - - - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
80. si:dkey-88l16.5 ENSDARG00000094850 12 1 - 1.000 - - - - - - - si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332]
81. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1 - 1.000 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
82. mhc1zaa_1 ENSDARG00000092162 27 1 - 1.000 - - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
83. ASCC3 ENSDARG00000086678 1 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
84. si:dkey-14o1.14 si:dkey-14o1.14 142 1 1.000 - - - - - - - -
85. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
86. gnb3b ENSDARG00000002696 46 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
87. C2CD4C C2CD4C 4 1 - 1.000 - - - - - - -
88. slc8a4a ENSDARG00000055154 90 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
89. mipa ENSDARG00000037285, ENSDARG00000116133 507 1 - 1.000 - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
90. cnga3a ENSDARG00000070726 8 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
91. rpap3 ENSDARG00000087962 22 1 - 1.000 - - - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
92. nsmce4a ENSDARG00000024311 125 1 - 1.000 - - - - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
93. acap3b ENSDARG00000099240 24 1 - 1.000 - - - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
94. BX511266.1 BX511266.1 21 1 - 1.000 - - - - - - -
95. rcv1 rcv1 77 1 1.000 - - - - - - - -
96. CCDC83 ENSDARG00000077179 29 1 - 1.000 - - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
97. si:dkey-32e6.6 ENSDARG00000070857 79 1 - 1.000 - - - - - - - si:dkey-32e6.6 [Source:ZFIN;Acc:ZDB-GENE-081031-90]
98. zgc:136254 ENSDARG00000068465 27 1 1.000 - - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
99. SLC35D3 ENSDARG00000107442 12 1 1.000 - - - - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
100. trim54 ENSDARG00000029907 10 1 - 1.000 - - - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]

There are 1413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA