Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir196b

Gene Name Gene ID Reads Annotation
mir196b ENSDARG00000081346 35 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]










Genes with expression patterns similar to mir196b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196b ENSDARG00000081346 35 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
2. INSM2 ENSDARG00000020655 122 2.638 0.905 - - - - 1.000 0.733 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
3. CR383676.3_2 CR383676.3_2 9 2 1.000 - - - - 1.000 - - -
4. si:dkey-254e13.13 si:dkey-254e13.13 6 2 1.000 - - - - 1.000 - - -
5. si:dkey-13n15.11 ENSDARG00000078002 8 1.98 - 0.980 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
6. ZSWIM2 ENSDARG00000075700 8 1.98 - - - - - 1.000 - - 0.980 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
7. LRRC61 ENSDARG00000077357 55 1.923 - 0.923 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
8. si:ch211-267j24.2 si:ch211-267j24.2 7 1.898 - 0.898 - - - 1.000 - - -
9. si:ch211-188c16.1 ENSDARG00000077288 16 1.88 - 0.880 - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
10. BX571880.1 ENSDARG00000097533 499 1.849 - 0.849 - - - 1.000 - - -
11. cthrc1b ENSDARG00000001971 44 1.75 1.000 - - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
12. STEAP2 ENSDARG00000062887 59 1.75 - 0.875 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
13. mea1 ENSDARG00000039820 589 1.747 1.000 0.747 - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
14. si:dkey-199l1.1 si:dkey-199l1.1 7 1.741 - - - - - 0.848 - - 0.893
15. BEGAIN BEGAIN 39 1.733 - - - - - 1.000 0.733 - -
16. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.733 1.000 - - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
17. nfatc1 ENSDARG00000036168 16 1.733 1.000 - - - - - 0.733 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
18. CU984579.1 ENSDARG00000116863 15 1.73 - - - - - 0.956 - - 0.774 leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. lingo2 lingo2 67 1.724 1.000 - - - - - 0.724 - -
20. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.714 - - - - - 1.000 0.714 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
21. SNAPC2 ENSDARG00000036473 158 1.667 - 0.880 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
22. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 1.623 0.771 0.852 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
23. si:zfos-979f1.2 ENSDARG00000011652 24 1.618 - 0.741 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
24. b3galnt2 ENSDARG00000046133 68 1.615 0.880 - - - - - 0.735 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
25. olig2 ENSDARG00000040946 1405 1.61 0.761 - - - - 0.849 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
26. wu:fe38f03 wu:fe38f03 22 1.61 0.877 - - - - - 0.733 - -
27. CR382372.2 CR382372.2 136 1.585 - 0.855 - - - - 0.730 - -
28. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 0.840 - - - - - 0.744 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
29. si:ch211-222k6.2 ENSDARG00000087046 144 1.573 - 0.829 0.744 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
30. ascl1a ENSDARG00000038386 1290 1.53 - - - - - 0.769 0.761 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
31. TP53I3 60 1.509 - 0.791 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
32. CABZ01021538.1 CABZ01021538.1 67 1.496 - - - - - 0.759 0.737 - -
33. tcp11l1 ENSDARG00000031890 257 1.474 - 0.748 - - - - 0.726 - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
34. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.443 0.714 0.729 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
35. si:dkey-258p11.1 si:dkey-258p11.1 48 1.436 - 0.703 - - - - 0.733 - -
36. CABZ01080229.2 CABZ01080229.2 9 1.424 0.715 - - - - 0.709 - - -
37. C22H19orf10_1 C22H19orf10_1 30 1 - - - - - 1.000 - - -
38. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
39. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
40. slc6a14 ENSDARG00000029866 61 1 - - - - - - - - 1.000 solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
41. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
42. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
43. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
44. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
45. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
46. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
47. slc44a5a ENSDARG00000017398 5 1 - - - - - 1.000 - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
48. abcg1 ENSDARG00000063475 97 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
49. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
50. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 1.000 - - - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
51. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
52. CT025669.1 ENSDARG00000100492 2 1 - - - - - - - - 1.000
53. CABZ01053381.1 CABZ01053381.1 1 1 - - - - - - - - 1.000
54. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
55. SPHK1 ENSDARG00000100290 2 1 - - - - - - - - 1.000 sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]
56. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
57. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
58. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
59. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
60. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
61. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
62. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
63. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
64. SNORD18_1 SNORD18_1 5 1 - - - - - - - - 1.000
65. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
66. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
67. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
68. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
69. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
70. U5_3 U5_3 3 1 1.000 - - - - - - - -
71. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
72. SLC35A3_1 SLC35A3_1 35 1 - - - - - 1.000 - - -
73. rbbp9 ENSDARG00000040713 12 1 - - - - - 1.000 - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
74. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
75. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
76. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - - - 1.000
77. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
78. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
79. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
80. SOX8 SOX8 22 1 - - - - - 1.000 - - -
81. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
82. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
83. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
84. WNK3 WNK3 36 1 - - - - - 1.000 - - -
85. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
86. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
87. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
88. EP400 ENSDARG00000100965 45 1 - - - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
89. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
90. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
91. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
92. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
93. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
94. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
95. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1 - - - - - 1.000 - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
96. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
97. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
98. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
99. si:dkey-3d18.5 ENSDARG00000096239 3 1 - - - - - - - - 1.000 si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
100. SLC22A7_1 SLC22A7_1 2 1 - - - - - 1.000 - - -

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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