Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir196b

Gene Name Gene ID Reads Annotation
mir196b ENSDARG00000081346 35 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]










Genes with expression patterns similar to mir196b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196b ENSDARG00000081346 35 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
2. INSM2 ENSDARG00000020655 122 2.638 0.905 - - - - 1.000 0.733 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
3. si:dkey-254e13.13 si:dkey-254e13.13 6 2 1.000 - - - - 1.000 - - -
4. CR383676.3_2 CR383676.3_2 9 2 1.000 - - - - 1.000 - - -
5. ZSWIM2 ENSDARG00000075700 8 1.98 - - - - - 1.000 - - 0.980 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
6. si:dkey-13n15.11 ENSDARG00000078002 8 1.98 - 0.980 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
7. LRRC61 ENSDARG00000077357 55 1.923 - 0.923 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
8. si:ch211-267j24.2 si:ch211-267j24.2 7 1.898 - 0.898 - - - 1.000 - - -
9. si:ch211-188c16.1 ENSDARG00000077288 16 1.88 - 0.880 - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
10. BX571880.1 ENSDARG00000097533 499 1.849 - 0.849 - - - 1.000 - - -
11. cthrc1b ENSDARG00000001971 44 1.75 1.000 - - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
12. STEAP2 ENSDARG00000062887 59 1.75 - 0.875 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
13. mea1 ENSDARG00000039820 589 1.747 1.000 0.747 - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
14. si:dkey-199l1.1 si:dkey-199l1.1 7 1.741 - - - - - 0.848 - - 0.893
15. nfatc1 ENSDARG00000036168 16 1.733 1.000 - - - - - 0.733 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
16. BEGAIN BEGAIN 39 1.733 - - - - - 1.000 0.733 - -
17. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.733 1.000 - - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
18. CU984579.1 ENSDARG00000116863 15 1.73 - - - - - 0.956 - - 0.774 leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. lingo2 lingo2 67 1.724 1.000 - - - - - 0.724 - -
20. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.714 - - - - - 1.000 0.714 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
21. SNAPC2 ENSDARG00000036473 158 1.667 - 0.880 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
22. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 1.623 0.771 0.852 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
23. si:zfos-979f1.2 ENSDARG00000011652 24 1.618 - 0.741 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
24. b3galnt2 ENSDARG00000046133 68 1.615 0.880 - - - - - 0.735 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
25. wu:fe38f03 wu:fe38f03 22 1.61 0.877 - - - - - 0.733 - -
26. olig2 ENSDARG00000040946 1405 1.61 0.761 - - - - 0.849 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
27. CR382372.2 CR382372.2 136 1.585 - 0.855 - - - - 0.730 - -
28. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 0.840 - - - - - 0.744 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
29. si:ch211-222k6.2 ENSDARG00000087046 144 1.573 - 0.829 0.744 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
30. ascl1a ENSDARG00000038386 1290 1.53 - - - - - 0.769 0.761 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
31. TP53I3 60 1.509 - 0.791 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
32. CABZ01021538.1 CABZ01021538.1 67 1.496 - - - - - 0.759 0.737 - -
33. tcp11l1 ENSDARG00000031890 257 1.474 - 0.748 - - - - 0.726 - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
34. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.443 0.714 0.729 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
35. si:dkey-258p11.1 si:dkey-258p11.1 48 1.436 - 0.703 - - - - 0.733 - -
36. CABZ01080229.2 CABZ01080229.2 9 1.424 0.715 - - - - 0.709 - - -
37. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
38. slc6a14 ENSDARG00000029866 61 1 - - - - - - - - 1.000 solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
39. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
40. cntnap5a ENSDARG00000073920 39 1 - - - - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
41. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
42. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
43. CABZ01086292.1 CABZ01086292.1 1 1 - - - - - 1.000 - - -
44. STPG2 ENSDARG00000061060 16 1 - - - - - - - - 1.000 sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
45. SNORD94 SNORD94 57 1 - - - - - 1.000 - - -
46. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
47. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
48. CR936977.1 ENSDARG00000100144 4 1 - - - - - 1.000 - - -
49. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
50. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
51. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
52. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
53. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
54. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
55. CT025669.1 ENSDARG00000100492 2 1 - - - - - - - - 1.000
56. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
57. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
58. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
59. zgc:173652_1 4 1 - - - - - 1.000 - - - zgc:173652
60. fancg ENSDARG00000024967, ENSDARG00000113462 82 1 1.000 - - - - - - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
61. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
62. jakmip2 ENSDARG00000053547 32 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
63. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
64. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1 - - - - - 1.000 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
65. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
66. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
67. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
68. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
69. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
70. WNK3 WNK3 36 1 - - - - - 1.000 - - -
71. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
72. EP400 ENSDARG00000100965 45 1 - - - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
73. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
74. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - - - - 1.000 aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
75. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
76. has3 ENSDARG00000057210, ENSDARG00000116537 108 1 - - - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
77. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
78. nr2e1 ENSDARG00000017107 340 1 - - - - - 1.000 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
79. BTBD17 BTBD17 53 1 - - - - - 1.000 - - -
80. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
81. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
82. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
83. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
84. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
85. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
86. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - 1.000 - - -
87. RORC ENSDARG00000087195 9 1 - - - - - - - - 1.000 RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
88. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
89. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - 1.000 - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
90. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
91. si:rp71-23d18.4 ENSDARG00000092779 1 1 - - - - - 1.000 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
92. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - 1.000 - - -
93. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
94. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
95. slc2a5 ENSDARG00000077875 5 1 - - - - - - - - 1.000 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
96. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
97. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
98. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
99. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
100. CXCR5 ENSDARG00000010514 1 1 - - - - - - - - 1.000 chemokine (C-X-C motif) receptor 5 [Source:ZFIN;Acc:ZDB-GENE-070302-8]

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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