Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir196b

Gene Name Gene ID Reads Annotation
mir196b ENSDARG00000081346 35 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]










Genes with expression patterns similar to mir196b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196b ENSDARG00000081346 35 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
2. INSM2 ENSDARG00000020655 122 2.638 0.905 - - - - 1.000 0.733 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
3. si:dkey-254e13.13 si:dkey-254e13.13 6 2 1.000 - - - - 1.000 - - -
4. CR383676.3_2 CR383676.3_2 9 2 1.000 - - - - 1.000 - - -
5. ZSWIM2 ENSDARG00000075700 8 1.98 - - - - - 1.000 - - 0.980 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
6. si:dkey-13n15.11 ENSDARG00000078002 8 1.98 - 0.980 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
7. LRRC61 ENSDARG00000077357 55 1.923 - 0.923 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
8. si:ch211-267j24.2 si:ch211-267j24.2 7 1.898 - 0.898 - - - 1.000 - - -
9. si:ch211-188c16.1 ENSDARG00000077288 16 1.88 - 0.880 - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
10. BX571880.1 ENSDARG00000097533 499 1.849 - 0.849 - - - 1.000 - - -
11. cthrc1b ENSDARG00000001971 44 1.75 1.000 - - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
12. STEAP2 ENSDARG00000062887 59 1.75 - 0.875 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
13. mea1 ENSDARG00000039820 589 1.747 1.000 0.747 - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
14. si:dkey-199l1.1 si:dkey-199l1.1 7 1.741 - - - - - 0.848 - - 0.893
15. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.733 1.000 - - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
16. nfatc1 ENSDARG00000036168 16 1.733 1.000 - - - - - 0.733 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
17. BEGAIN BEGAIN 39 1.733 - - - - - 1.000 0.733 - -
18. CU984579.1 ENSDARG00000116863 15 1.73 - - - - - 0.956 - - 0.774 leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. lingo2 lingo2 67 1.724 1.000 - - - - - 0.724 - -
20. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.714 - - - - - 1.000 0.714 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
21. SNAPC2 ENSDARG00000036473 158 1.667 - 0.880 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
22. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 1.623 0.771 0.852 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
23. si:zfos-979f1.2 ENSDARG00000011652 24 1.618 - 0.741 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
24. b3galnt2 ENSDARG00000046133 68 1.615 0.880 - - - - - 0.735 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
25. olig2 ENSDARG00000040946 1405 1.61 0.761 - - - - 0.849 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
26. wu:fe38f03 wu:fe38f03 22 1.61 0.877 - - - - - 0.733 - -
27. CR382372.2 CR382372.2 136 1.585 - 0.855 - - - - 0.730 - -
28. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 0.840 - - - - - 0.744 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
29. si:ch211-222k6.2 ENSDARG00000087046 144 1.573 - 0.829 0.744 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
30. ascl1a ENSDARG00000038386 1290 1.53 - - - - - 0.769 0.761 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
31. TP53I3 60 1.509 - 0.791 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
32. CABZ01021538.1 CABZ01021538.1 67 1.496 - - - - - 0.759 0.737 - -
33. tcp11l1 ENSDARG00000031890 257 1.474 - 0.748 - - - - 0.726 - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
34. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.443 0.714 0.729 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
35. si:dkey-258p11.1 si:dkey-258p11.1 48 1.436 - 0.703 - - - - 0.733 - -
36. CABZ01080229.2 CABZ01080229.2 9 1.424 0.715 - - - - 0.709 - - -
37. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
38. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
39. si:dkey-176g1.6 si:dkey-176g1.6 5 1 - - - - - 1.000 - - -
40. WNK3 WNK3 36 1 - - - - - 1.000 - - -
41. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
42. RORC ENSDARG00000087195 9 1 - - - - - - - - 1.000 RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
43. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
44. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - - - - 1.000 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
45. U5_3 U5_3 3 1 1.000 - - - - - - - -
46. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
47. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
48. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - - - - - - 1.000
49. TSPAN19 TSPAN19 3 1 - - - - - - - - 1.000
50. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
51. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
52. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
53. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1 - - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
54. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
55. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
56. slc6a14 ENSDARG00000029866 61 1 - - - - - - - - 1.000 solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
57. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
58. abcg1 ENSDARG00000063475 97 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
59. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
60. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
61. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
62. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
63. sparcl1 ENSDARG00000074989 80 1 - - - - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
64. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
65. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
66. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
67. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
68. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - 1.000 - - -
69. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
70. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
71. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
72. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
73. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
74. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
75. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
76. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
77. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
78. CR376827.1 CR376827.1 1 1 - - - - - - - - 1.000
79. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
80. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
81. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
82. SLC4A5 9 1 - - - - - - - - 1.000 solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
83. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
84. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
85. nt5c1ba ENSDARG00000018153 31 1 1.000 - - - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
86. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
87. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
88. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
89. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 1.000 - - - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
90. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1 - - - - - 1.000 - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
91. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
92. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
93. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
94. si:ch211-237l4.6 ENSDARG00000056915 49 1 1.000 - - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
95. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
96. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
97. SNORD18_1 SNORD18_1 5 1 - - - - - - - - 1.000
98. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
99. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
100. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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