Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir196b

Gene Name Gene ID Reads Annotation
mir196b ENSDARG00000081346 35 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]










Genes with expression patterns similar to mir196b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196b ENSDARG00000081346 35 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
2. INSM2 ENSDARG00000020655 122 2.638 0.905 - - - - 1.000 0.733 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
3. CR383676.3_2 CR383676.3_2 9 2 1.000 - - - - 1.000 - - -
4. si:dkey-254e13.13 si:dkey-254e13.13 6 2 1.000 - - - - 1.000 - - -
5. si:dkey-13n15.11 ENSDARG00000078002 8 1.98 - 0.980 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
6. ZSWIM2 ENSDARG00000075700 8 1.98 - - - - - 1.000 - - 0.980 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
7. LRRC61 ENSDARG00000077357 55 1.923 - 0.923 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
8. si:ch211-267j24.2 si:ch211-267j24.2 7 1.898 - 0.898 - - - 1.000 - - -
9. si:ch211-188c16.1 ENSDARG00000077288 16 1.88 - 0.880 - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
10. BX571880.1 ENSDARG00000097533 499 1.849 - 0.849 - - - 1.000 - - -
11. STEAP2 ENSDARG00000062887 59 1.75 - 0.875 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
12. cthrc1b ENSDARG00000001971 44 1.75 1.000 - - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
13. mea1 ENSDARG00000039820 589 1.747 1.000 0.747 - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
14. si:dkey-199l1.1 si:dkey-199l1.1 7 1.741 - - - - - 0.848 - - 0.893
15. BEGAIN BEGAIN 39 1.733 - - - - - 1.000 0.733 - -
16. nfatc1 ENSDARG00000036168 16 1.733 1.000 - - - - - 0.733 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
17. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.733 1.000 - - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
18. CU984579.1 ENSDARG00000116863 15 1.73 - - - - - 0.956 - - 0.774 leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. lingo2 lingo2 67 1.724 1.000 - - - - - 0.724 - -
20. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.714 - - - - - 1.000 0.714 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
21. SNAPC2 ENSDARG00000036473 158 1.667 - 0.880 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
22. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 1.623 0.771 0.852 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
23. si:zfos-979f1.2 ENSDARG00000011652 24 1.618 - 0.741 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
24. b3galnt2 ENSDARG00000046133 68 1.615 0.880 - - - - - 0.735 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
25. wu:fe38f03 wu:fe38f03 22 1.61 0.877 - - - - - 0.733 - -
26. olig2 ENSDARG00000040946 1405 1.61 0.761 - - - - 0.849 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
27. CR382372.2 CR382372.2 136 1.585 - 0.855 - - - - 0.730 - -
28. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 0.840 - - - - - 0.744 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
29. si:ch211-222k6.2 ENSDARG00000087046 144 1.573 - 0.829 0.744 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
30. ascl1a ENSDARG00000038386 1290 1.53 - - - - - 0.769 0.761 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
31. TP53I3 60 1.509 - 0.791 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
32. CABZ01021538.1 CABZ01021538.1 67 1.496 - - - - - 0.759 0.737 - -
33. tcp11l1 ENSDARG00000031890 257 1.474 - 0.748 - - - - 0.726 - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
34. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.443 0.714 0.729 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
35. si:dkey-258p11.1 si:dkey-258p11.1 48 1.436 - 0.703 - - - - 0.733 - -
36. CABZ01080229.2 CABZ01080229.2 9 1.424 0.715 - - - - 0.709 - - -
37. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
38. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
39. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
40. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
41. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
42. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1 - - - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
43. CXCR5 ENSDARG00000010514 1 1 - - - - - - - - 1.000 chemokine (C-X-C motif) receptor 5 [Source:ZFIN;Acc:ZDB-GENE-070302-8]
44. GRAMD2_1 GRAMD2_1 12 1 - - - - - - - - 1.000
45. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
46. CT025669.1 ENSDARG00000100492 2 1 - - - - - - - - 1.000
47. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
48. styx ENSDARG00000057699 48 1 1.000 - - - - - - - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
49. gngt2b ENSDARG00000103543 132 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
50. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
51. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
52. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
53. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
54. or103-5 ENSDARG00000075128 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
55. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
56. SPHK1 ENSDARG00000100290 2 1 - - - - - - - - 1.000 sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]
57. CR774199.1 CR774199.1 1 1 - - - - - 1.000 - - -
58. STPG2 ENSDARG00000061060 16 1 - - - - - - - - 1.000 sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
59. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
60. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
61. si:dkey-3d18.5 ENSDARG00000096239 3 1 - - - - - - - - 1.000 si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
62. SOX8 SOX8 22 1 - - - - - 1.000 - - -
63. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - 1.000 - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
64. taar18d ENSDARG00000054252 3 1 - - - - - 1.000 - - - trace amine associated receptor 18d [Source:ZFIN;Acc:ZDB-GENE-060413-12]
65. has3 ENSDARG00000057210, ENSDARG00000116537 108 1 - - - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
66. agxtb ENSDARG00000018478 2 1 - - - - - 1.000 - - - alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
67. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
68. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
69. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
70. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
71. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
72. slc2a5 ENSDARG00000077875 5 1 - - - - - - - - 1.000 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
73. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
74. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
75. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - - - 1.000
76. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
77. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
78. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
79. crhbp ENSDARG00000024831 63 1 - - - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
80. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
81. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
82. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - - - - 1.000 aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
83. SLC22A7_1 SLC22A7_1 2 1 - - - - - 1.000 - - -
84. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
85. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
86. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
87. C22H19orf10_1 C22H19orf10_1 30 1 - - - - - 1.000 - - -
88. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
89. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
90. si:ch211-114l13.3 ENSDARG00000094346 2 1 - - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
91. CABZ01053381.1 CABZ01053381.1 1 1 - - - - - - - - 1.000
92. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - 1.000 - - -
93. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
94. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
95. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
96. samsn1b ENSDARG00000078647 8 1 - - - - - 1.000 - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
97. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
98. cntnap5a ENSDARG00000073920 39 1 - - - - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
99. fgf14 ENSDARG00000040982 5 1 - - - - - 1.000 - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
100. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA