Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir196b

Gene Name Gene ID Reads Annotation
mir196b ENSDARG00000081346 35 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]










Genes with expression patterns similar to mir196b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196b ENSDARG00000081346 35 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
2. INSM2 ENSDARG00000020655 122 2.638 0.905 - - - - 1.000 0.733 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
3. CR383676.3_2 CR383676.3_2 9 2 1.000 - - - - 1.000 - - -
4. si:dkey-254e13.13 si:dkey-254e13.13 6 2 1.000 - - - - 1.000 - - -
5. ZSWIM2 ENSDARG00000075700 8 1.98 - - - - - 1.000 - - 0.980 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
6. si:dkey-13n15.11 ENSDARG00000078002 8 1.98 - 0.980 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
7. LRRC61 ENSDARG00000077357 55 1.923 - 0.923 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
8. si:ch211-267j24.2 si:ch211-267j24.2 7 1.898 - 0.898 - - - 1.000 - - -
9. si:ch211-188c16.1 ENSDARG00000077288 16 1.88 - 0.880 - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
10. BX571880.1 ENSDARG00000097533 499 1.849 - 0.849 - - - 1.000 - - -
11. STEAP2 ENSDARG00000062887 59 1.75 - 0.875 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
12. cthrc1b ENSDARG00000001971 44 1.75 1.000 - - - - 0.750 - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
13. mea1 ENSDARG00000039820 589 1.747 1.000 0.747 - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
14. si:dkey-199l1.1 si:dkey-199l1.1 7 1.741 - - - - - 0.848 - - 0.893
15. nfatc1 ENSDARG00000036168 16 1.733 1.000 - - - - - 0.733 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
16. BEGAIN BEGAIN 39 1.733 - - - - - 1.000 0.733 - -
17. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.733 1.000 - - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
18. CU984579.1 ENSDARG00000116863 15 1.73 - - - - - 0.956 - - 0.774 leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. lingo2 lingo2 67 1.724 1.000 - - - - - 0.724 - -
20. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.714 - - - - - 1.000 0.714 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
21. SNAPC2 ENSDARG00000036473 158 1.667 - 0.880 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
22. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 1.623 0.771 0.852 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
23. si:zfos-979f1.2 ENSDARG00000011652 24 1.618 - 0.741 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
24. b3galnt2 ENSDARG00000046133 68 1.615 0.880 - - - - - 0.735 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
25. wu:fe38f03 wu:fe38f03 22 1.61 0.877 - - - - - 0.733 - -
26. olig2 ENSDARG00000040946 1405 1.61 0.761 - - - - 0.849 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
27. CR382372.2 CR382372.2 136 1.585 - 0.855 - - - - 0.730 - -
28. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 0.840 - - - - - 0.744 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
29. si:ch211-222k6.2 ENSDARG00000087046 144 1.573 - 0.829 0.744 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
30. ascl1a ENSDARG00000038386 1290 1.53 - - - - - 0.769 0.761 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
31. TP53I3 60 1.509 - 0.791 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
32. CABZ01021538.1 CABZ01021538.1 67 1.496 - - - - - 0.759 0.737 - -
33. tcp11l1 ENSDARG00000031890 257 1.474 - 0.748 - - - - 0.726 - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
34. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.443 0.714 0.729 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
35. si:dkey-258p11.1 si:dkey-258p11.1 48 1.436 - 0.703 - - - - 0.733 - -
36. CABZ01080229.2 CABZ01080229.2 9 1.424 0.715 - - - - 0.709 - - -
37. si:ch211-12h2.7 si:ch211-12h2.7 1 1 - - - - - 1.000 - - -
38. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
39. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
40. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
41. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
42. CU695006.2 CU695006.2 1 1 - - - - - 1.000 - - -
43. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
44. crhbp ENSDARG00000024831 63 1 - - - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
45. SLC4A5 9 1 - - - - - - - - 1.000 solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
46. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
47. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
48. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
49. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
50. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
51. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - - - - 1.000 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
52. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
53. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1 - - - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
54. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
55. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
56. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
57. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
58. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1 - - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
59. FANCA ENSDARG00000098241 39 1 - - - - - 1.000 - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
60. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
61. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
62. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
63. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
64. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
65. gngt2b ENSDARG00000103543 132 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
66. myh6 ENSDARG00000090637 66 1 - - - - - 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
67. sparcl1 ENSDARG00000074989 80 1 - - - - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
68. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
69. tmem184b tmem184b 2 1 1.000 - - - - - - - -
70. slc2a5 ENSDARG00000077875 5 1 - - - - - - - - 1.000 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
71. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
72. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
73. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - - - - - - 1.000
74. nsun5_1 ENSDARG00000043209 3 1 1.000 - - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
75. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
76. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - - - - 1.000 aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
77. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
78. CR774199.1 CR774199.1 1 1 - - - - - 1.000 - - -
79. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
80. or103-5 ENSDARG00000075128 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
81. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
82. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - 1.000 - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
83. CABZ01086292.1 CABZ01086292.1 1 1 - - - - - 1.000 - - -
84. zgc:174680 ENSDARG00000100702 3 1 - - - - - 1.000 - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
85. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
86. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
87. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
88. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
89. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
90. si:dkey-176g1.6 si:dkey-176g1.6 5 1 - - - - - 1.000 - - -
91. CR392036.1 ENSDARG00000069895 1 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101884429]
92. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
93. BTBD17 BTBD17 53 1 - - - - - 1.000 - - -
94. prdm1b ENSDARG00000098925 440 1 1.000 - - - - - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
95. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
96. CR376827.1 CR376827.1 1 1 - - - - - - - - 1.000
97. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
98. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
99. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
100. CAMK1 CAMK1 28 1 1.000 - - - - - - - -

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA