Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir196a-1

Gene Name Gene ID Reads Annotation
mir196a-1 ENSDARG00000083309 15 microRNA 196a-1 [Source:ZFIN;Acc:ZDB-MIRNAG-041217-14]










Genes with expression patterns similar to mir196a-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir196a-1 ENSDARG00000083309 15 4 - - 1.000 - 1.000 - - 1.000 1.000 microRNA 196a-1 [Source:ZFIN;Acc:ZDB-MIRNAG-041217-14]
2. PLCG2 ENSDARG00000068763 11 1.431 - - - - - - - 0.712 0.719 phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
3. si:dkey-241l7.4 ENSDARG00000089478 8 1 - - 1.000 - - - - - - si:dkey-241l7.4 [Source:ZFIN;Acc:ZDB-GENE-041014-238]
4. dre-mir-2189 ENSDARG00000098723 9 0.979 - - 0.979 - - - - - - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
5. si:dkey-153k10.7 3 0.979 - - 0.979 - - - - - - si:dkey-153k10.7, transcript variant X1
6. zgc:174680 ENSDARG00000100702 3 0.979 - - 0.979 - - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
7. btr32 ENSDARG00000053940 17 0.979 - - 0.979 - - - - - - bloodthirsty-related gene family, member 32 [Source:ZFIN;Acc:ZDB-GENE-060421-3827]
8. ZC2HC1C ENSDARG00000070526 14 0.979 - - 0.979 - - - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
9. mvb12bb ENSDARG00000079478 9 0.977 - - 0.977 - - - - - - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
10. ACAP3 ACAP3 2 0.974 - - 0.974 - - - - - -
11. BX000442.2 BX000442.2 8 0.97 - - 0.970 - - - - - -
12. tmem167b ENSDARG00000059400 9 0.964 - - 0.964 - - - - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
13. si:dkey-24p1.7 ENSDARG00000089404 7 0.961 - - 0.961 - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
14. crp1 ENSDARG00000071454 31 0.956 - - 0.956 - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
15. CU655961.3 ENSDARG00000106724 14 0.954 - - 0.954 - - - - - -
16. SPAG16 7 0.95 - - - - 0.950 - - - - sperm associated antigen 16
17. THBS1 THBS1 6 0.95 - - - - 0.950 - - - -
18. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.95 - - - - 0.950 - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
19. C20H6orf165 C20H6orf165 10 0.95 - - - - 0.950 - - - -
20. TEKT4 ENSDARG00000028899 47 0.95 - - - - 0.950 - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
21. noxa1 ENSDARG00000056047, ENSDARG00000110918, ENSDARG00000112288 7 0.95 - - - - 0.950 - - - - NADPH oxidase activator 1 [Source:ZFIN;Acc:ZDB-GENE-050913-32]
22. CR388152.1 CR388152.1 7 0.95 - - - - 0.950 - - - -
23. MTSS1L MTSS1L 7 0.95 - - - - 0.950 - - - -
24. lrch4 ENSDARG00000068258 24 0.95 - - - - 0.950 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
25. si:ch211-131e11.14 si:ch211-131e11.14 7 0.95 - - - - 0.950 - - - -
26. FBF1 FBF1 13 0.95 - - - - 0.950 - - - -
27. CABZ01044775.1 CABZ01044775.1 5 0.95 - - - - 0.950 - - - -
28. DNAI2 DNAI2 6 0.95 - - - - 0.950 - - - -
29. zgc:174938 ENSDARG00000075622 5 0.95 - - - - 0.950 - - - - zgc:174938 [Source:ZFIN;Acc:ZDB-GENE-070928-44]
30. BX572619.4 BX572619.4 10 0.95 - - - - 0.950 - - - -
31. QSOX2 ENSDARG00000077174 26 0.949 - - - - 0.949 - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
32. STRC ENSDARG00000105391 10 0.948 - - - - 0.948 - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
33. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 0.947 - - - - 0.947 - - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
34. zgc:114037_3 17 0.947 - - - - 0.947 - - - - zgc:114037
35. si:dkey-51d8.6 ENSDARG00000090769 17 0.947 - - - - 0.947 - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
36. alk ENSDARG00000095833 32 0.946 - - - - 0.946 - - - - ALK receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-031027-1]
37. BX897671.1 BX897671.1 10 0.946 - - 0.946 - - - - - -
38. cxcl-c1c cxcl-c1c 159 0.946 - - - - 0.946 - - - -
39. LIX1 ENSDARG00000052154 9 0.945 - - - - 0.945 - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
40. GJC1 GJC1 44 0.945 - - - - 0.945 - - - -
41. dcun1d5 ENSDARG00000100363 3 0.945 - - 0.945 - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
42. CR391998.1 ENSDARG00000091817 15 0.944 - - 0.944 - - - - - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
43. zgc:173652 22 0.943 - - 0.943 - - - - - - zgc:173652
44. CABZ01088930.1 CABZ01088930.1 20 0.943 - - 0.943 - - - - - -
45. chd5 ENSDARG00000105083 132 0.942 - - - - 0.942 - - - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
46. CU929149.1 ENSDARG00000071554 9 0.939 - - - - 0.939 - - - -
47. dnaaf1 ENSDARG00000012030 58 0.938 - - - - 0.938 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
48. CU467888.1 CU467888.1 30 0.937 - - - - 0.937 - - - -
49. rpph1 33 0.936 - - - - 0.936 - - - - ribonuclease P RNA component H1
50. ripply2 ENSDARG00000070535 18 0.936 - - - - 0.936 - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
51. si:dkey-211g8.6 ENSDARG00000063088 19 0.936 - - 0.936 - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
52. CU571169.4 CU571169.4 12 0.934 - - - - 0.934 - - - -
53. gcnt3 ENSDARG00000060471 37 0.934 - - - - 0.934 - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
54. ak7a ENSDARG00000019001 71 0.933 - - - - 0.933 - - - - adenylate kinase 7a [Source:ZFIN;Acc:ZDB-GENE-040724-122]
55. si:dkey-77p23.2 si:dkey-77p23.2 22 0.932 - - 0.932 - - - - - -
56. SLC35A3_1 SLC35A3_1 35 0.931 - - - - 0.931 - - - -
57. slc15a1a ENSDARG00000100315 23 0.929 - - - - 0.929 - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
58. LRIT3 LRIT3 12 0.927 - - - - - - - 0.927 -
59. EML4 7 0.926 - - - - 0.926 - - - - echinoderm microtubule associated protein like 4
60. BX890577.2 BX890577.2 94 0.926 - - - - 0.926 - - - -
61. SNORA81 SNORA81 47 0.924 - - - - 0.924 - - - -
62. WDSUB1 ENSDARG00000090418 357 0.924 - - - - 0.924 - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
63. slc18b1 ENSDARG00000044047 7 0.922 - - 0.922 - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
64. BX004880.2 BX004880.2 83 0.922 - - - - 0.922 - - - -
65. si:ch211-188c16.1 ENSDARG00000077288 16 0.921 - - - - 0.921 - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
66. mir92a-1 20 0.916 - - - - 0.916 - - - - microRNA 92a-1
67. sorl1 ENSDARG00000013892 13 0.912 - - 0.912 - - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
68. morn2 ENSDARG00000071360 44 0.91 - - - - 0.910 - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
69. pak1_1 ENSDARG00000103959 28 0.907 - - - - 0.907 - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
70. iscub ENSDARG00000026582, ENSDARG00000115112 147 0.907 - - - - 0.907 - - - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
71. gabbr2 ENSDARG00000061042 122 0.905 - - - - 0.905 - - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
72. elovl4b ENSDARG00000027495 107 0.899 - - 0.899 - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
73. pcdh8 ENSDARG00000006467 317 0.899 - - - - 0.899 - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
74. F2RL2 ENSDARG00000090524 211 0.892 - - - - 0.892 - - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
75. gpr75 ENSDARG00000098526 32 0.891 - - 0.891 - - - - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
76. nog2 ENSDARG00000043066 233 0.89 - - - - 0.890 - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
77. HSBP1 HSBP1 158 0.89 - - - - 0.890 - - - -
78. cadm1b ENSDARG00000042677 277 0.887 - - - - 0.887 - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
79. cyp2ae1 ENSDARG00000013524 14 0.886 - - - - 0.886 - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
80. slc35d1b ENSDARG00000027986 138 0.885 - - - - 0.885 - - - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1b [Source:ZFIN;Acc:ZDB-GENE-040426-1213]
81. ccdc11 ccdc11 79 0.882 - - - - 0.882 - - - -
82. alg6 ENSDARG00000017617 483 0.878 - - - - 0.878 - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
83. ccdc173 ENSDARG00000077928 260 0.874 - - - - 0.874 - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
84. TPMT TPMT 138 0.873 - - - - 0.873 - - - -
85. COPS6 5 0.873 - - 0.873 - - - - - - COP9 signalosome subunit 6
86. serpinb1l2 ENSDARG00000070396 37 0.872 - - - - 0.872 - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
87. CD200_2 CD200_2 47 0.872 - - - - 0.872 - - - -
88. SPG21 ENSDARG00000007760 645 0.87 - - 0.870 - - - - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
89. si:ch211-190k17.13 si:ch211-190k17.13 48 0.869 - - 0.869 - - - - - -
90. zdhhc12a ENSDARG00000076632 13 0.867 - - - - 0.867 - - - - zinc finger, DHHC-type containing 12a [Source:ZFIN;Acc:ZDB-GENE-081104-40]
91. stx17 ENSDARG00000006869 24 0.867 - - 0.867 - - - - - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
92. cyp3c4 ENSDARG00000070021 95 0.864 - - 0.864 - - - - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
93. si:dkey-20i20.9 ENSDARG00000092027 23 0.862 - - 0.862 - - - - - - si:dkey-20i20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-152]
94. si:dkey-14d8.6 ENSDARG00000045835 72 0.86 - - - - 0.860 - - - - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
95. Mar-08 Mar-08 52 0.859 - - - - 0.859 - - - -
96. pou5f3 ENSDARG00000044774 212 0.859 - - - - 0.859 - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
97. BX548047.2 ENSDARG00000115500 17 0.857 - - - - 0.857 - - - -
98. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 0.853 - - - - 0.853 - - - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
99. setd4 ENSDARG00000036592 237 0.853 - - - - 0.853 - - - - SET domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050808-2]
100. ifnlr1 ENSDARG00000087131 73 0.853 - - - - 0.853 - - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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