Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir138

Gene Name Gene ID Reads Annotation
mir138 19 microRNA 138










Genes with expression patterns similar to mir138

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir138 19 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 microRNA 138
2. scospondin ENSDARG00000067859 4 1.837 1.000 - - - 0.837 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
3. trpc2 trpc2 10 1.83 1.000 - - - - - - 0.830 -
4. CR942805.3 CR942805.3 7 1.779 1.000 - - 0.779 - - - - -
5. si:ch211-167b20.7 si:ch211-167b20.7 3 1.768 - - - - 0.875 - - 0.893 -
6. rx3 ENSDARG00000052893 43 1.742 1.000 - - - 0.742 - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
7. CABZ01080134.1 CABZ01080134.1 2 1.73 - - - - 0.837 - - 0.893 -
8. slc25a3a ENSDARG00000027424 11 1.727 - - - - 0.727 - - 1.000 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
9. zgc:172053 ENSDARG00000038321 9 1.716 1.000 - - - - - - 0.716 - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
10. htr3b ENSDARG00000061749 49 1.58 - - 0.841 - - - - - 0.739 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
11. FUK ENSDARG00000032650 20 1.534 - - 0.766 - 0.768 - - - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
12. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
13. lppr2a lppr2a 19 1 1.000 - - - - - - - -
14. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
15. zfpm2a ENSDARG00000040123 46 1 1.000 - - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
16. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
17. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
18. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
19. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
20. shisa9 shisa9 35 1 1.000 - - - - - - - -
21. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
22. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
23. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
24. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
25. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
26. BX927369.1 ENSDARG00000105047 21 1 1.000 - - - - - - - -
27. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
28. MIER3 MIER3 114 1 1.000 - - - - - - - -
29. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
30. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
31. megf11 ENSDARG00000062686 230 1 1.000 - - - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
32. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
33. U5_4 U5_4 1 1 1.000 - - - - - - - -
34. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
35. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
36. fastkd1 ENSDARG00000056128 141 1 1.000 - - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
37. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
38. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
39. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
40. CABZ01084613.1 CABZ01084613.1 22 1 - - - - 1.000 - - - -
41. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
42. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
43. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
44. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
45. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
46. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
47. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
48. si:ch73-68b22.2 ENSDARG00000094609 18 1 - - - - 1.000 - - - - si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
49. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
50. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
51. si:ch211-244b2.4 ENSDARG00000045530 32 1 1.000 - - - - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
52. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
53. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
54. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
55. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
56. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
57. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
58. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
59. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
60. TMEM57 TMEM57 260 1 1.000 - - - - - - - -
61. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
62. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
63. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
64. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
65. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
66. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
67. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - - - - 1.000 - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
68. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
69. mxc ENSDARG00000024789 68 1 1.000 - - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
70. cacna1f cacna1f 1 1 - - - - 1.000 - - - -
71. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
72. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
73. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
74. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
75. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
76. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
77. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - - - - 1.000 - - - -
78. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
79. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
80. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
81. MPP4 MPP4 1 1 1.000 - - - - - - - -
82. slitrk3b ENSDARG00000074739 19 1 - - - - 1.000 - - - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
83. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
84. lrguk ENSDARG00000069698 5 1 1.000 - - - - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
85. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
86. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
87. VDAC3 ENSDARG00000003695 34 1 1.000 - - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
88. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
89. CABZ01070631.1 ENSDARG00000110183 6 1 1.000 - - - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
90. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
91. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
92. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
93. scpp6 2 1 - - - - 1.000 - - - - secretory calcium-binding phosphoprotein 6, transcript variant X1
94. exoc4 ENSDARG00000004336 32 1 1.000 - - - - - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
95. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
96. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
97. FBF1 FBF1 13 1 1.000 - - - - - - - -
98. oxtrl ENSDARG00000044175 10 1 - - - - 1.000 - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
99. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
100. QDPR QDPR 11 1 1.000 - - - - - - - -

There are 457 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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