Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir138

Gene Name Gene ID Reads Annotation
mir138 19 microRNA 138










Genes with expression patterns similar to mir138

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir138 19 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 microRNA 138
2. scospondin ENSDARG00000067859 4 1.837 1.000 - - - 0.837 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
3. trpc2 trpc2 10 1.83 1.000 - - - - - - 0.830 -
4. CR942805.3 CR942805.3 7 1.779 1.000 - - 0.779 - - - - -
5. si:ch211-167b20.7 si:ch211-167b20.7 3 1.768 - - - - 0.875 - - 0.893 -
6. rx3 ENSDARG00000052893 43 1.742 1.000 - - - 0.742 - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
7. CABZ01080134.1 CABZ01080134.1 2 1.73 - - - - 0.837 - - 0.893 -
8. slc25a3a ENSDARG00000027424 11 1.727 - - - - 0.727 - - 1.000 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
9. zgc:172053 ENSDARG00000038321 9 1.716 1.000 - - - - - - 0.716 - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
10. htr3b ENSDARG00000061749 49 1.58 - - 0.841 - - - - - 0.739 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
11. FUK ENSDARG00000032650 20 1.534 - - 0.766 - 0.768 - - - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
12. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
13. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
14. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
15. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - - - - 1.000 - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
16. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
17. cacna1f cacna1f 1 1 - - - - 1.000 - - - -
18. mxc ENSDARG00000024789 68 1 1.000 - - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
19. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
20. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
21. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
22. TMEM57 TMEM57 260 1 1.000 - - - - - - - -
23. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
24. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
25. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
26. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
27. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
28. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
29. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
30. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
31. si:ch211-244b2.4 ENSDARG00000045530 32 1 1.000 - - - - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
32. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
33. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
34. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
35. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
36. si:ch73-68b22.2 ENSDARG00000094609 18 1 - - - - 1.000 - - - - si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
37. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
38. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
39. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
40. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
41. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
42. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
43. CABZ01084613.1 CABZ01084613.1 22 1 - - - - 1.000 - - - -
44. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
45. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
46. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
47. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
48. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
49. fastkd1 ENSDARG00000056128 141 1 1.000 - - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
50. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
51. megf11 ENSDARG00000062686 230 1 1.000 - - - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
52. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
53. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
54. U5_4 U5_4 1 1 1.000 - - - - - - - -
55. BX927369.1 ENSDARG00000105047 21 1 1.000 - - - - - - - -
56. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
57. MIER3 MIER3 114 1 1.000 - - - - - - - -
58. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
59. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
60. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
61. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
62. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
63. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
64. shisa9 shisa9 35 1 1.000 - - - - - - - -
65. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
66. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
67. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
68. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
69. zfpm2a ENSDARG00000040123 46 1 1.000 - - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
70. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
71. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
72. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
73. lppr2a lppr2a 19 1 1.000 - - - - - - - -
74. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
75. nrl ENSDARG00000100466 41 1 1.000 - - - - - - - - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
76. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - - - - - - - 1.000 -
77. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
78. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
79. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
80. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
81. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
82. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
83. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
84. si:ch211-187f22.2 si:ch211-187f22.2 7 1 1.000 - - - - - - - -
85. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
86. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
87. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
88. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
89. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
90. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
91. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
92. EVI5L ENSDARG00000052766 8 1 1.000 - - - - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
93. rtn4rl2a ENSDARG00000052012 5 1 - - - - - - - 1.000 - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
94. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
95. U1_29 U1_29 0 1 1.000 - - - - - - - -
96. QDPR QDPR 11 1 1.000 - - - - - - - -
97. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
98. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
99. exoc4 ENSDARG00000004336 32 1 1.000 - - - - - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
100. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]

There are 457 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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