Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir133b_1

Gene Name Gene ID Reads Annotation
mir133b_1 671 microRNA 133b










Genes with expression patterns similar to mir133b_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir133b_1 671 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA 133b
2. sh3bgr ENSDARG00000021633 3498 4.159 0.808 0.876 - - - 0.787 0.767 0.921 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
3. txlnbb ENSDARG00000076241 6396 3.37 0.828 0.904 - - - 0.837 0.801 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. hhatla ENSDARG00000039051 6598 3.293 0.866 0.853 - - - - 0.776 0.798 - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
5. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.257 0.937 0.844 - - - 0.713 0.763 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
6. limch1a ENSDARG00000074275 2981 3.255 0.843 0.845 - - - 0.815 0.752 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
7. ryr3 ENSDARG00000071331 6795 3.252 0.933 0.834 - - - 0.783 0.702 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
8. gypc ENSDARG00000041546 1487 3.215 0.846 0.833 - - - 0.732 0.804 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
9. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 3.204 0.811 - - - - 0.726 0.817 0.850 - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
10. myod1 ENSDARG00000030110 6019 3.199 0.796 0.850 - - - 0.712 0.841 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
11. klhl40a ENSDARG00000039052 2537 3.164 0.876 0.840 - - - 0.701 0.747 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
12. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.147 0.758 0.884 - - - 0.766 0.739 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
13. kcnma1a ENSDARG00000079840 2584 3.133 0.845 0.718 - - - 0.766 0.804 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
14. myoz2a ENSDARG00000012311 1373 3.118 0.703 - - - - 0.726 0.750 0.939 - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
15. si:ch1073-184j22.2 ENSDARG00000078598 707 3.113 0.768 0.701 - - - 0.720 - 0.924 - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
16. casq1b ENSDARG00000018105 2643 3.111 0.725 0.759 - - - - 0.846 0.781 - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
17. smtnl1 ENSDARG00000041257 7410 3.085 0.848 - - 0.700 - 0.807 0.730 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
18. mef2d ENSDARG00000040237 6144 3.079 0.737 0.746 - - - - 0.709 0.887 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
19. CR392006.1 CR392006.1 1401 3.069 0.710 0.883 - - - 0.720 0.756 - -
20. vwde ENSDARG00000103443 5758 3.039 0.727 0.837 - - - 0.769 0.706 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
21. mtdhb ENSDARG00000004939 1225 3.038 0.770 0.711 - - - 0.759 0.798 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
22. CU633479.5 ENSDARG00000114818 1815 3.032 0.746 0.809 - - - - 0.734 0.743 -
23. MYOT ENSDARG00000076312 1791 2.985 0.793 0.738 - - - 0.746 0.708 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
24. stac3 ENSDARG00000098883 1765 2.964 0.755 0.750 - - - 0.709 0.750 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
25. MUSTN1 MUSTN1 1882 2.957 0.737 0.766 - - - 0.716 0.738 - -
26. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.648 0.900 0.902 - - - - 0.846 - -
27. smarcd3a ENSDARG00000038786 2894 2.581 - 0.830 - - - 0.866 0.885 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
28. cacna2d1a ENSDARG00000014804 1924 2.575 0.830 0.858 - - - - 0.887 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
29. fxr1 ENSDARG00000022968 2831 2.56 0.873 - - - - 0.857 0.830 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
30. arpp21 ENSDARG00000061081 892 2.56 0.872 0.767 - - - - - 0.921 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
31. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.558 0.881 0.903 - - - - 0.774 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
32. akap6 ENSDARG00000077295 1382 2.543 0.859 0.778 - - - - 0.906 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
33. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 2.54 - 0.801 - - - - 0.802 0.937 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
34. xirp2a ENSDARG00000071113 7113 2.518 0.862 0.790 - - - - 0.866 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
35. cacng1 cacng1 3118 2.496 0.907 0.819 - - - 0.770 - - -
36. PTPLA PTPLA 4044 2.488 0.819 0.882 - - - - 0.787 - -
37. ampd1 ENSDARG00000033832 221 2.479 - - - - - 0.740 0.828 0.911 - adenosine monophosphate deaminase 1 (isoform M) [Source:ZFIN;Acc:ZDB-GENE-040426-1906]
38. srl ENSDARG00000104587 11126 2.469 0.800 0.874 - - - - 0.795 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
39. znf106a ENSDARG00000016651 6049 2.46 0.839 0.818 - - - - 0.803 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
40. ptrfa ptrfa 4363 2.452 0.843 0.864 - - - 0.745 - - -
41. COL22A1 COL22A1 4473 2.448 0.855 0.795 - - - - 0.798 - -
42. sptb ENSDARG00000030490 7128 2.444 0.785 0.895 - - - - 0.764 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
43. pygma ENSDARG00000055518 15972 2.442 0.851 0.823 - - - - 0.768 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
44. hspg2 ENSDARG00000076564 3440 2.442 - 0.784 - - - - 0.772 0.886 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
45. TRIM63 TRIM63 1600 2.439 0.804 0.932 - - - - 0.703 - -
46. chrnd ENSDARG00000019342 2728 2.438 0.717 0.899 - - - - - 0.822 - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
47. znf648 ENSDARG00000104823 1918 2.435 0.782 0.797 - - - - 0.856 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
48. ntmt1 ENSDARG00000022399 5779 2.434 0.833 0.865 - - - - 0.736 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
49. ITGB1BP2 ENSDARG00000030176 2472 2.433 0.822 0.768 - - - - 0.843 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
50. PTP4A3 ENSDARG00000039997 3814 2.433 0.853 0.798 - - - 0.782 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
51. ube2d4 ENSDARG00000015057 1089 2.431 0.818 0.804 - - - - 0.809 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
52. adss ENSDARG00000002071 5497 2.427 0.876 - - - - - 0.819 0.732 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
53. TMPO TMPO 3264 2.427 0.824 0.859 - - - - 0.744 - -
54. hsp90aa1.1 ENSDARG00000010478 47784 2.425 0.748 - - - - 0.820 0.857 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
55. zgc:92518 ENSDARG00000016343 3837 2.418 0.838 - - - - 0.761 0.819 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
56. smyd1b ENSDARG00000091253 4964 2.417 0.825 0.793 - - - 0.799 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
57. usp28 ENSDARG00000008880 1850 2.414 0.858 0.814 - - - - 0.742 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
58. nexn ENSDARG00000057317 10972 2.411 0.909 - - - - 0.741 0.761 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
59. klhl41a ENSDARG00000068888 1034 2.408 0.728 0.755 - - - - - 0.925 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
60. zgc:158296 ENSDARG00000070923 3935 2.408 - 0.764 - - - 0.816 0.828 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
61. tns1 tns1 5891 2.401 0.870 0.788 - - - - 0.743 - -
62. FHOD3_1 FHOD3_1 983 2.398 0.822 0.870 - - - - 0.706 - -
63. alpk2 ENSDARG00000079637 1483 2.397 0.805 0.796 - - - - 0.796 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
64. jph1a ENSDARG00000058603 2852 2.388 - 0.927 - - - 0.749 0.712 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
65. myhc4 ENSDARG00000035438 1322 2.387 - 0.871 - - - 0.767 0.749 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
66. obsl1b ENSDARG00000077388 2511 2.384 0.815 0.846 - - - 0.723 - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
67. fitm1 ENSDARG00000056464 1759 2.384 0.795 0.860 - - - 0.729 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
68. EHBP1L1 EHBP1L1 2500 2.382 0.805 0.806 - - - - 0.771 - -
69. PTGES3L PTGES3L 4801 2.381 0.821 - - - - 0.780 0.780 - -
70. pygmb ENSDARG00000013317 5454 2.376 - 0.780 - - - - 0.752 0.844 - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
71. cct8 ENSDARG00000008243 6843 2.373 - 0.791 - - - 0.860 0.722 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
72. ache ENSDARG00000031796 1985 2.368 - 0.721 - - - 0.873 0.774 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
73. BX294434.1 ENSDARG00000061272 6493 2.362 0.813 0.789 - - - - 0.760 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
74. cfl2 ENSDARG00000014106 8051 2.361 0.815 0.843 - 0.703 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
75. fgf13a ENSDARG00000035056 752 2.358 - 0.753 - - - 0.763 0.842 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
76. fermt2 ENSDARG00000020242 9351 2.358 0.800 - - - - 0.725 0.833 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
77. dtnba ENSDARG00000077694 5483 2.357 0.777 0.828 - - - 0.752 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
78. flncb ENSDARG00000018820 5595 2.355 0.838 - - - - 0.814 0.703 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
79. METTL21C METTL21C 1717 2.354 0.776 - - - - 0.733 0.845 - -
80. C13H10orf71 3489 2.347 0.806 0.835 - - - - 0.706 - - chromosome 13 C10orf71 homolog
81. hapln1a ENSDARG00000089769 12334 2.339 0.833 0.791 - - - - 0.715 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
82. mdh1b ENSDARG00000018008 3196 2.329 0.805 - - - - 0.710 0.814 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
83. tspan12 ENSDARG00000032389 419 2.328 0.706 0.801 - - - - 0.821 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
84. cmya5 ENSDARG00000061379 1423 2.326 0.793 0.779 - - - - 0.754 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
85. NRAP ENSDARG00000009341 3565 2.326 0.767 - - - - 0.774 0.785 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
86. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.326 0.833 - - - - 0.749 0.744 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
87. CABZ01074435.1 CABZ01074435.1 4551 2.321 0.820 - - - - 0.750 0.751 - -
88. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.32 0.810 - - - - 0.719 0.791 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
89. ATP5J_2 ATP5J_2 2381 2.315 0.775 0.780 - - - - 0.760 - -
90. ptp4a3 ENSDARG00000039997 1964 2.315 0.730 0.791 - - - - - 0.794 - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
91. trim55a ENSDARG00000029596 2858 2.314 0.729 0.829 - - - - 0.756 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
92. PHB2 PHB2 3755 2.296 0.726 0.843 - - - - 0.727 - -
93. sucla2 ENSDARG00000005359 5992 2.284 0.742 0.794 - - - 0.748 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
94. si:ch211-242b18.1 ENSDARG00000054723 2929 2.281 - 0.825 - - - 0.735 0.721 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
95. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.279 0.792 0.784 - - - 0.703 - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
96. dhrs7c dhrs7c 1173 2.274 - 0.768 - - - 0.786 0.720 - -
97. CU638714.1 ENSDARG00000100303 2132 2.268 0.812 0.744 - - - - 0.712 - -
98. alg3 ENSDARG00000053155 1843 2.25 0.713 0.805 - - - - 0.732 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
99. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.243 0.778 0.714 - - - 0.751 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
100. cacnb1 ENSDARG00000002167 1402 2.239 0.703 0.807 - - - - 0.729 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]

There are 1605 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA