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Results for mir133a-1

Gene Name Gene ID Reads Annotation
mir133a-1 77 microRNA 133a-1










Genes with expression patterns similar to mir133a-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir133a-1 77 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA 133a-1
2. htr3a ENSDARG00000089212 51 1.877 - - - - - 0.928 - 0.949 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
3. si:ch1073-357b18.4 ENSDARG00000096602 121 1.846 - - - - - 0.908 - 0.938 - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
4. mamdc1 mamdc1 156 1.799 - - - - - 0.823 - 0.976 -
5. cx34.4 ENSDARG00000075854 168 1.788 - 0.834 - - - 0.954 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
6. mkrn2 ENSDARG00000007630 127 1.778 - - - - - 0.865 - 0.913 - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
7. BX664721.5 BX664721.5 462 1.749 - - - - - 0.964 - 0.785 -
8. rltpr 258 1.749 - - - - - 0.849 - 0.900 - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
9. SACM1L SACM1L 416 1.746 - - - - - 0.858 - 0.888 -
10. PPFIA3 ENSDARG00000077053 310 1.745 - - - - - 0.919 - 0.826 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
11. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.726 - - - - - 0.781 - 0.945 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
12. UBL7 UBL7 197 1.717 - - - - - 0.917 - 0.800 -
13. mipep ENSDARG00000055344 63 1.711 - - - - - 0.948 0.763 - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
14. si:rp71-36a1.2 ENSDARG00000093686 81 1.709 - - - - - 0.745 - 0.964 - si:rp71-36a1.2 [Source:ZFIN;Acc:ZDB-GENE-050208-646]
15. zgc:162160 ENSDARG00000060259 117 1.708 - - 0.860 - - 0.848 - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
16. kif19 ENSDARG00000053026 124 1.704 - - - - - 0.923 0.781 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
17. slco4a1 ENSDARG00000075948 74 1.699 0.715 - - - - - - 0.984 - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
18. glipr2l ENSDARG00000016837 440 1.69 - - - - - 0.932 - 0.758 - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
19. elnb ENSDARG00000069017 744 1.689 - - - - - 0.739 - 0.950 - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
20. CR847906.1 ENSDARG00000099493 88 1.678 - - 0.771 - - 0.907 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
21. ZNF337_6 ZNF337_6 898 1.676 - 0.740 - - - - - 0.936 -
22. avpr1b avpr1b 58 1.676 - - 0.795 - - 0.881 - - -
23. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.674 0.715 - - - - 0.959 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
24. si:dkey-264b2.3 19 1.671 0.715 - - - - 0.956 - - - si:dkey-264b2.3, transcript variant X2
25. s100b ENSDARG00000057598 41 1.668 - - - - - 0.837 0.831 - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
26. dtnbb ENSDARG00000013020 280 1.663 - - - - - 0.862 0.801 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
27. cyp27a7 ENSDARG00000033802 216 1.663 0.715 - - - - 0.948 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
28. btbd3b ENSDARG00000087517 107 1.663 0.715 - - - - - - 0.948 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
29. DUSP19 DUSP19 10 1.662 0.715 - - - - 0.947 - - -
30. si:ch211-212g7.6 ENSDARG00000079369 707 1.659 - - - - - 0.875 - 0.784 - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
31. tatdn3 ENSDARG00000054076 130 1.657 - - - - - - - 0.928 0.729 TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
32. si:ch211-163b2.4 ENSDARG00000094890 140 1.65 0.715 - - - - 0.935 - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
33. cacna2d3 ENSDARG00000078760 211 1.645 - - - - - 0.725 - 0.920 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
34. gng2_1 ENSDARG00000056831 113 1.638 0.715 - - - - 0.923 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
35. mutyh 512 1.631 - 0.809 - - - - - 0.822 - mutY DNA glycosylase
36. mvb12ba ENSDARG00000091619 18 1.627 - 0.778 0.849 - - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
37. si:dkey-270b7.1 si:dkey-270b7.1 83 1.623 - - - - - 0.889 - - 0.734
38. pknox2 ENSDARG00000055349 784 1.62 - - - - - 0.878 0.742 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
39. itfg2 ENSDARG00000002174 114 1.62 0.715 - - - - 0.905 - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
40. zgc:171489 ENSDARG00000052300 119 1.614 0.909 - - - - 0.705 - - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
41. xkr6 xkr6 286 1.612 0.715 - - - - 0.897 - - -
42. ablim1a ENSDARG00000060149 228 1.611 0.715 - - - - 0.896 - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
43. h2afy2 ENSDARG00000087897 585 1.606 - 0.843 - - - - 0.763 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
44. UIMC1_1 UIMC1_1 430 1.602 - - - - - 0.755 - 0.847 -
45. LIN9 ENSDARG00000028475 227 1.598 - - 0.724 - - 0.874 - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
46. KEL ENSDARG00000076950 159 1.595 - 0.796 0.799 - - - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
47. ginm1 ENSDARG00000021975 1393 1.583 - - - - - 0.858 - 0.725 - glycoprotein integral membrane 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5900]
48. nin ENSDARG00000060298 1558 1.579 - 0.707 - - - 0.872 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
49. ENSDARG00000077141 ENSDARG00000077141 227 1.563 - - 0.716 - - 0.847 - - -
50. marveld3 ENSDARG00000099654 113 1.562 - 0.724 - - - 0.838 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
51. GPR64 GPR64 58 1.557 0.715 - - - - 0.842 - - -
52. wu:fc75a09 ENSDARG00000111625 289 1.55 - - - - - 0.796 - 0.754 - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
53. TESK1 TESK1 109 1.549 - - 0.713 - - 0.836 - - -
54. CR354432.1 CR354432.1 424 1.543 - - 0.775 - - - 0.768 - -
55. cog8 ENSDARG00000002798 229 1.532 - - 0.738 - - 0.794 - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
56. fbrsl1 ENSDARG00000058232 885 1.531 - - - - - 0.786 - 0.745 - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
57. si:dkey-21o19.6 si:dkey-21o19.6 18 1.524 0.715 - - - - 0.809 - - -
58. layna ENSDARG00000035169 515 1.511 - - - - - 0.716 - 0.795 - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
59. crmp1 ENSDARG00000056742 332 1.48 - 0.709 - - - 0.771 - - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
60. erfl3 ENSDARG00000062801 149 1.456 - - - - - 0.731 0.725 - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
61. chmp7 ENSDARG00000041362 831 1.451 - - - - - 0.701 - 0.750 - charged multivesicular body protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1750]
62. tprkb ENSDARG00000014941 686 1.441 0.713 0.728 - - - - - - - Tp53rk binding protein [Source:ZFIN;Acc:ZDB-GENE-041114-68]
63. aldh2.2_1 ENSDARG00000028087 279 1.42 0.715 - - - - 0.705 - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
64. zgc:55621 ENSDARG00000010782 3 1 1.000 - - - - - - - - zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
65. CR383676.3_1 CR383676.3_1 177 1 1.000 - - - - - - - -
66. 5S_rRNA_2 5S_rRNA_2 89 1 1.000 - - - - - - - -
67. CR790363.1 ENSDARG00000097364 145 1 1.000 - - - - - - - -
68. CABZ01071530.2 CABZ01071530.2 47 1 1.000 - - - - - - - -
69. SLC4A5 9 1 1.000 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
70. si:ch211-10m5.3 si:ch211-10m5.3 10 1 1.000 - - - - - - - -
71. si:dkey-239i20.4 ENSDARG00000043514, ENSDARG00000114327 178 1 1.000 - - - - - - - - si:dkey-239i20.4 [Source:ZFIN;Acc:ZDB-GENE-030131-2644]
72. si:ch73-167f18.4 si:ch73-167f18.4 9 1 1.000 - - - - - - - -
73. si:dkey-25i10.5 si:dkey-25i10.5 18 1 1.000 - - - - - - - -
74. CR377211.1 ENSDARG00000079364 24 0.983 - - - - - 0.983 - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
75. mcph1 ENSDARG00000058372 51 0.978 - - - - - 0.978 - - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
76. mir10b-2 116 0.976 - - - - - 0.976 - - - microRNA 10b-2
77. si:dkey-231k6.4 si:dkey-231k6.4 72 0.975 - - - - - 0.975 - - -
78. slc22a2 ENSDARG00000030530 313 0.972 - - - - - 0.972 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
79. HELZ2_1 ENSDARG00000012600 53 0.972 - - - - - 0.972 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
80. zgc:174697 zgc:174697 128 0.971 - - - - - 0.971 - - -
81. gak ENSDARG00000090654 695 0.97 - - - - - 0.970 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
82. scp2a ENSDARG00000012194 614 0.97 - - - - - - - 0.970 - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
83. zgc:112146 ENSDARG00000104829 34 0.969 - - - - - - - 0.969 - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
84. KCNS1 KCNS1 24 0.967 - - - - - 0.967 - - -
85. BX640398.1 ENSDARG00000097190 219 0.966 - - - - - - - 0.966 -
86. SNORA57 SNORA57 148 0.965 - - - - - 0.965 - - -
87. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 0.963 - - - - - 0.963 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
88. opn4.1 ENSDARG00000007553 66 0.963 - - - - - 0.963 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
89. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.963 - - - - - 0.963 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
90. si:dkey-81p22.11 ENSDARG00000093797 68 0.962 - - - - - 0.962 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
91. GPC6 GPC6 4 0.961 - - - - - 0.961 - - -
92. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.961 - - - - - - - 0.961 - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
93. atg10 ENSDARG00000104846 85 0.96 - - - - - 0.960 - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
94. zgc:73349 zgc:73349 4 0.959 - - - - - 0.959 - - -
95. retsatl ENSDARG00000034989 41 0.959 - - - - - 0.959 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
96. CABZ01079192.1 ENSDARG00000101629 23 0.959 - - - - - 0.959 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
97. irgf1 ENSDARG00000070774 7 0.959 - - - - - 0.959 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
98. si:dkey-192k22.2 ENSDARG00000095111 4 0.959 - - - - - 0.959 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
99. ftr03 8 0.959 - - - - - 0.959 - - - finTRIM family, member 3
100. pdk2 pdk2 32 0.959 - - - - - 0.959 - - -

There are 1596 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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