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Results for mir124-1

Gene Name Gene ID Reads Annotation
mir124-1 10 microRNA 124-1










Genes with expression patterns similar to mir124-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir124-1 10 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 microRNA 124-1
2. si:ch211-285c6.2 ENSDARG00000079234 1 2 - - 1.000 - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
3. CABZ01090303.1 CABZ01090303.1 2 2 1.000 - - - - 1.000 - - -
4. si:rp71-7l19.7 si:rp71-7l19.7 1 2 - - 1.000 - - 1.000 - - -
5. si:ch211-202m22.1 ENSDARG00000094491 24 2 1.000 - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
6. 5S_rRNA_19 5S_rRNA_19 1 2 - - 1.000 - - 1.000 - - -
7. si:dkey-148a12.2 si:dkey-148a12.2 1 2 1.000 - 1.000 - - - - - -
8. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - - 1.000 - - -
9. cxxc4 ENSDARG00000077817 197 1.992 1.000 - - - - 0.992 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
10. QDPR QDPR 11 1.928 1.000 - - - - - - - 0.928
11. USF2 ENSDARG00000020228 3 1.928 - - - - - 1.000 - - 0.928 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
12. vip ENSDARG00000078247 10 1.914 - - - - - 1.000 - - 0.914 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
13. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1.908 1.000 - - - - - - - 0.908
14. si:dkey-164k14.1 si:dkey-164k14.1 5 1.889 - - 1.000 - - - - - 0.889
15. gnai3 ENSDARG00000030644 29 1.871 1.000 - - - - 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
16. opcml ENSDARG00000013005 18 1.849 1.000 - - - - 0.849 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
17. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.83 - - - - - 1.000 - - 0.830 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
18. scospondin ENSDARG00000067859 4 1.822 1.000 - - 0.822 - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
19. VDAC3 ENSDARG00000003695 34 1.822 1.000 - - 0.822 - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
20. panx2 ENSDARG00000063019 3 1.822 - - - 0.822 - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
21. MAP3K13 ENSDARG00000009493 8 1.805 - - 0.855 - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. si:ch211-187f22.2 si:ch211-187f22.2 7 1.797 1.000 - - 0.797 - - - - -
23. si:dkey-97l20.5 si:dkey-97l20.5 33 1.764 - - - - 0.764 1.000 - - -
24. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.758 0.758 - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
25. NXPH4 11 1.75 - - - 0.822 - - - - 0.928 neurexophilin 4
26. si:ch211-268b13.3 si:ch211-268b13.3 28 1.726 1.000 - - - - 0.726 - - -
27. si:rp71-1f1.4 ENSDARG00000092476 11 1.725 1.000 - - - - 0.725 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
28. exoc4 ENSDARG00000004336 32 1.72 1.000 - - - - - - - 0.720 exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
29. MFAP4_4 MFAP4_4 9 1.702 - - 0.702 - - 1.000 - - -
30. zgc:162322 zgc:162322 1 1.702 - - 1.000 - - - - - 0.702
31. si:dkey-20j3.4 si:dkey-20j3.4 4 1.679 - - - - - - - 0.762 0.917
32. si:ch211-10a23.2 ENSDARG00000060656 471 1.532 0.797 - - - - 0.735 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
33. ppfia4 ENSDARG00000053205 276 1.456 0.743 - - - - - - 0.713 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
34. stc1l ENSDARG00000058476 512 1.448 - - - - 0.705 - - 0.743 - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
35. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 1.000 - - - - - - - -
36. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
37. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
38. si:ch211-238e22.2 ENSDARG00000112450 23 1 1.000 - - - - - - - - si:ch211-238e22.2 [Source:ZFIN;Acc:ZDB-GENE-041210-346]
39. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
40. mir150 ENSDARG00000081593 4 1 - - 1.000 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
41. si:ch211-276k2.2 4 1 - - 1.000 - - - - - - si:ch211-276k2.2
42. wisp1a ENSDARG00000054331 26 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
43. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
44. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
45. CU424462.2 CU424462.2 73 1 1.000 - - - - - - - -
46. prokr1a ENSDARG00000074182 2 1 - - 1.000 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
47. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
48. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
49. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
50. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
51. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
52. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
53. INPP5A 1 1 - - 1.000 - - - - - - inositol polyphosphate-5-phosphatase A
54. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
55. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
56. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
57. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
58. EVI5L ENSDARG00000052766 8 1 1.000 - - - - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
59. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
60. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
61. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
62. trpc2 trpc2 10 1 1.000 - - - - - - - -
63. slc44a5a ENSDARG00000017398 5 1 1.000 - - - - - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
64. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - 1.000 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
65. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
66. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
67. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
68. si:ch211-26b3.4 ENSDARG00000075491 50 1 1.000 - - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
69. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
70. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
71. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
72. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -
73. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
74. si:dkey-188p4.1 si:dkey-188p4.1 1 1 1.000 - - - - - - - -
75. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
76. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
77. U4_1 U4_1 2 1 - - 1.000 - - - - - -
78. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
79. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
80. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - - 1.000 - - - - - -
81. BX664721.1 ENSDARG00000051804 21 1 1.000 - - - - - - - -
82. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
83. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
84. CR356223.4 CR356223.4 42 1 1.000 - - - - - - - -
85. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
86. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
87. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
88. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
89. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
90. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
91. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
92. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
93. syt8 syt8 82 1 1.000 - - - - - - - -
94. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
95. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
96. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
97. sox11a ENSDARG00000077811 25 1 1.000 - - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
98. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
99. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
100. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]

There are 817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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