Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mir124-1

Gene Name Gene ID Reads Annotation
mir124-1 10 microRNA 124-1










Genes with expression patterns similar to mir124-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir124-1 10 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 microRNA 124-1
2. si:ch211-202m22.1 ENSDARG00000094491 24 2 1.000 - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
3. 5S_rRNA_19 5S_rRNA_19 1 2 - - 1.000 - - 1.000 - - -
4. si:ch211-285c6.2 ENSDARG00000079234 1 2 - - 1.000 - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
5. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - - 1.000 - - -
6. si:dkey-148a12.2 si:dkey-148a12.2 1 2 1.000 - 1.000 - - - - - -
7. si:rp71-7l19.7 si:rp71-7l19.7 1 2 - - 1.000 - - 1.000 - - -
8. CABZ01090303.1 CABZ01090303.1 2 2 1.000 - - - - 1.000 - - -
9. cxxc4 ENSDARG00000077817 197 1.992 1.000 - - - - 0.992 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
10. USF2 ENSDARG00000020228 3 1.928 - - - - - 1.000 - - 0.928 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
11. QDPR QDPR 11 1.928 1.000 - - - - - - - 0.928
12. vip ENSDARG00000078247 10 1.914 - - - - - 1.000 - - 0.914 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
13. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1.908 1.000 - - - - - - - 0.908
14. si:dkey-164k14.1 si:dkey-164k14.1 5 1.889 - - 1.000 - - - - - 0.889
15. gnai3 ENSDARG00000030644 29 1.871 1.000 - - - - 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
16. opcml ENSDARG00000013005 18 1.849 1.000 - - - - 0.849 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
17. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.83 - - - - - 1.000 - - 0.830 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
18. VDAC3 ENSDARG00000003695 34 1.822 1.000 - - 0.822 - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
19. scospondin ENSDARG00000067859 4 1.822 1.000 - - 0.822 - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
20. panx2 ENSDARG00000063019 3 1.822 - - - 0.822 - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
21. MAP3K13 ENSDARG00000009493 8 1.805 - - 0.855 - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. si:ch211-187f22.2 si:ch211-187f22.2 7 1.797 1.000 - - 0.797 - - - - -
23. si:dkey-97l20.5 si:dkey-97l20.5 33 1.764 - - - - 0.764 1.000 - - -
24. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.758 0.758 - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
25. NXPH4 11 1.75 - - - 0.822 - - - - 0.928 neurexophilin 4
26. si:ch211-268b13.3 si:ch211-268b13.3 28 1.726 1.000 - - - - 0.726 - - -
27. si:rp71-1f1.4 ENSDARG00000092476 11 1.725 1.000 - - - - 0.725 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
28. exoc4 ENSDARG00000004336 32 1.72 1.000 - - - - - - - 0.720 exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
29. zgc:162322 zgc:162322 1 1.702 - - 1.000 - - - - - 0.702
30. MFAP4_4 MFAP4_4 9 1.702 - - 0.702 - - 1.000 - - -
31. si:dkey-20j3.4 si:dkey-20j3.4 4 1.679 - - - - - - - 0.762 0.917
32. si:ch211-10a23.2 ENSDARG00000060656 471 1.532 0.797 - - - - 0.735 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
33. ppfia4 ENSDARG00000053205 276 1.456 0.743 - - - - - - 0.713 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
34. stc1l ENSDARG00000058476 512 1.448 - - - - 0.705 - - 0.743 - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
35. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
36. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
37. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
38. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
39. CU184872.1 CU184872.1 15 1 - - 1.000 - - - - - -
40. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
41. prokr1a ENSDARG00000074182 2 1 - - 1.000 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
42. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
43. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
44. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
45. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
46. gfra2b ENSDARG00000044015 5 1 1.000 - - - - - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
47. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
48. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
49. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
50. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
51. csf3r ENSDARG00000045959 4 1 - - 1.000 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
52. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
53. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
54. nup85 ENSDARG00000098679 2 1 - - 1.000 - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
55. BX572103.3 BX572103.3 0 1 - - 1.000 - - - - - -
56. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
57. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
58. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
59. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
60. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - - 1.000 - - - - - -
61. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
62. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
63. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
64. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
65. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
66. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - 1.000 - - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
67. lingo3a ENSDARG00000061970 234 1 1.000 - - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
68. MIER3 MIER3 114 1 1.000 - - - - - - - -
69. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
70. CR388013.3 CR388013.3 45 1 1.000 - - - - - - - -
71. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
72. CR931764.1 CR931764.1 8 1 - - 1.000 - - - - - -
73. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - 1.000 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
74. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
75. CABZ01073389.1 CABZ01073389.1 0 1 - - 1.000 - - - - - -
76. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
77. U5_4 U5_4 1 1 1.000 - - - - - - - -
78. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
79. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
80. si:dkeyp-85d8.5 ENSDARG00000103346 3 1 - - 1.000 - - - - - - si:dkeyp-85d8.5 [Source:ZFIN;Acc:ZDB-GENE-110913-144]
81. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
82. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
83. shisa9 shisa9 35 1 1.000 - - - - - - - -
84. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
85. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
86. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
87. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
88. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - 1.000 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
89. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
90. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
91. BIN1 BIN1 11 1 1.000 - - - - - - - -
92. sh2d4b sh2d4b 1 1 - - 1.000 - - - - - -
93. U1_29 U1_29 0 1 1.000 - - - - - - - -
94. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
95. U1_7 U1_7 0 1 - - 1.000 - - - - - -
96. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
97. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
98. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
99. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
100. unc5da ENSDARG00000092722 8 1 - - 1.000 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]

There are 817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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