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Results for mir124-1

Gene Name Gene ID Reads Annotation
mir124-1 10 microRNA 124-1










Genes with expression patterns similar to mir124-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir124-1 10 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 microRNA 124-1
2. si:rp71-7l19.7 si:rp71-7l19.7 1 2 - - 1.000 - - 1.000 - - -
3. CABZ01090303.1 CABZ01090303.1 2 2 1.000 - - - - 1.000 - - -
4. si:ch211-285c6.2 ENSDARG00000079234 1 2 - - 1.000 - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
5. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - - 1.000 - - -
6. si:ch211-202m22.1 ENSDARG00000094491 24 2 1.000 - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
7. 5S_rRNA_19 5S_rRNA_19 1 2 - - 1.000 - - 1.000 - - -
8. si:dkey-148a12.2 si:dkey-148a12.2 1 2 1.000 - 1.000 - - - - - -
9. cxxc4 ENSDARG00000077817 197 1.992 1.000 - - - - 0.992 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
10. QDPR QDPR 11 1.928 1.000 - - - - - - - 0.928
11. USF2 ENSDARG00000020228 3 1.928 - - - - - 1.000 - - 0.928 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
12. vip ENSDARG00000078247 10 1.914 - - - - - 1.000 - - 0.914 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
13. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1.908 1.000 - - - - - - - 0.908
14. si:dkey-164k14.1 si:dkey-164k14.1 5 1.889 - - 1.000 - - - - - 0.889
15. gnai3 ENSDARG00000030644 29 1.871 1.000 - - - - 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
16. opcml ENSDARG00000013005 18 1.849 1.000 - - - - 0.849 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
17. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.83 - - - - - 1.000 - - 0.830 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
18. scospondin ENSDARG00000067859 4 1.822 1.000 - - 0.822 - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
19. panx2 ENSDARG00000063019 3 1.822 - - - 0.822 - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
20. VDAC3 ENSDARG00000003695 34 1.822 1.000 - - 0.822 - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
21. MAP3K13 ENSDARG00000009493 8 1.805 - - 0.855 - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. si:ch211-187f22.2 si:ch211-187f22.2 7 1.797 1.000 - - 0.797 - - - - -
23. si:dkey-97l20.5 si:dkey-97l20.5 33 1.764 - - - - 0.764 1.000 - - -
24. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.758 0.758 - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
25. NXPH4 11 1.75 - - - 0.822 - - - - 0.928 neurexophilin 4
26. si:ch211-268b13.3 si:ch211-268b13.3 28 1.726 1.000 - - - - 0.726 - - -
27. si:rp71-1f1.4 ENSDARG00000092476 11 1.725 1.000 - - - - 0.725 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
28. exoc4 ENSDARG00000004336 32 1.72 1.000 - - - - - - - 0.720 exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
29. MFAP4_4 MFAP4_4 9 1.702 - - 0.702 - - 1.000 - - -
30. zgc:162322 zgc:162322 1 1.702 - - 1.000 - - - - - 0.702
31. si:dkey-20j3.4 si:dkey-20j3.4 4 1.679 - - - - - - - 0.762 0.917
32. si:ch211-10a23.2 ENSDARG00000060656 471 1.532 0.797 - - - - 0.735 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
33. ppfia4 ENSDARG00000053205 276 1.456 0.743 - - - - - - 0.713 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
34. stc1l ENSDARG00000058476 512 1.448 - - - - 0.705 - - 0.743 - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
35. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
36. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
37. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
38. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
39. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
40. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
41. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
42. csf3r ENSDARG00000045959 4 1 - - 1.000 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
43. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
44. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
45. si:rp71-20i5.5 si:rp71-20i5.5 9 1 - - 1.000 - - - - - -
46. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - 1.000 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
47. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
48. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
49. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
50. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
51. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
52. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
53. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
54. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
55. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
56. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
57. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
58. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
59. U1_29 U1_29 0 1 1.000 - - - - - - - -
60. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
61. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
62. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
63. fastkd1 ENSDARG00000056128 141 1 1.000 - - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
64. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
65. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
66. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
67. BX572103.3 BX572103.3 0 1 - - 1.000 - - - - - -
68. si:dkey-35m8.1 ENSDARG00000094587 0 1 1.000 - - - - - - - - si:dkey-35m8.1 [Source:ZFIN;Acc:ZDB-GENE-060526-296]
69. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
70. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
71. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
72. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
73. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
74. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
75. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
76. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
77. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
78. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
79. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
80. uts1 ENSDARG00000014927 35 1 1.000 - - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
81. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
82. mir138 19 1 1.000 - - - - - - - - microRNA 138
83. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
84. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
85. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
86. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
87. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
88. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
89. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
90. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
91. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
92. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
93. STOX2 STOX2 0 1 - - 1.000 - - - - - -
94. DKK3 DKK3 12 1 - - - - - 1.000 - - -
95. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
96. pou4f3 ENSDARG00000006206 8 1 - - 1.000 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
97. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
98. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
99. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
100. LRRC71 LRRC71 11 1 1.000 - - - - - - - -

There are 817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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