Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mier1b

Gene Name Gene ID Reads Annotation
mier1b ENSDARG00000001447 1680 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]










Genes with expression patterns similar to mier1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mier1b ENSDARG00000001447 1680 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
2. cnih4 ENSDARG00000087759 3937 1.94 0.951 - - - - - - - 0.989 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
3. pfdn4 ENSDARG00000061228 8266 1.887 0.905 - - - - - - - 0.982 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
4. ubqln4 ENSDARG00000052975 6453 1.852 0.862 - - - - - - - 0.990 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
5. atp5mf ENSDARG00000037867 11052 1.822 0.837 - - - - - - - 0.985 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
6. polr3k ENSDARG00000037835 1552 1.788 - - - - - - 0.792 - 0.996 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
7. ppcs ENSDARG00000061889 224 1.77 0.996 - - - - - 0.774 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
8. BX296557.2 BX296557.2 1083 1.767 - - - - - - 0.771 - 0.996
9. tbc1d12b ENSDARG00000073771 787 1.766 0.997 - - - - - - 0.769 - TBC1 domain family, member 12b [Source:ZFIN;Acc:ZDB-GENE-121214-108]
10. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.758 - - - - - - 0.763 - 0.995 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
11. mboat2a ENSDARG00000031845 1255 1.74 0.991 - - - - - 0.749 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
12. tfip11 ENSDARG00000056932 479 1.734 - 0.844 - - - - - 0.890 - tuftelin interacting protein 11 [Source:ZFIN;Acc:ZDB-GENE-040718-479]
13. mrps24 ENSDARG00000100116 1750 1.731 0.984 0.747 - - - - - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
14. myeov2 3351 1.73 0.977 - - - - - 0.753 - - myeloma overexpressed 2
15. cox14 ENSDARG00000092124 2229 1.73 0.974 0.756 - - - - - - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
16. tfcp2 ENSDARG00000060306 1024 1.722 0.997 - - - - - 0.725 - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
17. PDCL3 ENSDARG00000100651 164 1.72 0.994 0.726 - - - - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
18. twf1b ENSDARG00000011661 630 1.711 - - - - - - 0.810 0.901 - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
19. sult6b1 ENSDARG00000086826 2070 1.711 0.988 - - - - - 0.723 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
20. ZFHX2 2463 1.708 - 0.724 - - - - - - 0.984 zinc finger homeobox 2, transcript variant X2
21. rcor1 ENSDARG00000031434 2733 1.702 0.964 - - - - - 0.738 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
22. bcl3 ENSDARG00000087832 69 1.697 - 0.758 - - - - - 0.939 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
23. phactr2 ENSDARG00000027172 306 1.696 - - - - - - 0.841 0.855 - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
24. agpat4 ENSDARG00000069044 4487 1.692 0.987 - - - - - 0.705 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
25. CLDN23 CLDN23 2002 1.69 0.928 - - - - - 0.762 - -
26. skia ENSDARG00000042151 1850 1.689 0.966 - - - - - 0.723 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
27. ASPH ENSDARG00000055945 214 1.687 - 0.760 - - - - - 0.927 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
28. ptbp3 ENSDARG00000043757 6760 1.682 0.933 - - - - - 0.749 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
29. ctbp2 ctbp2 3255 1.671 0.926 - - 0.745 - - - - -
30. tmem258 ENSDARG00000078785 9578 1.666 0.869 - - - - - 0.797 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
31. atrip ENSDARG00000063076 385 1.655 - - - - - - 0.733 0.922 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
32. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.647 0.898 - - - - - 0.749 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
33. si:ch1073-174d20.2 ENSDARG00000079651 171 1.632 - - - - - - 0.706 0.926 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
34. atp2b4 5891 1.619 0.900 - - - - - 0.719 - - ATPase, Ca++ transporting, plasma membrane 4
35. tmem201 ENSDARG00000077307 453 1.593 - - - - - - 0.725 0.868 - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
36. spoplb ENSDARG00000003974 887 1.572 - 0.702 - - - - - 0.870 - speckle-type POZ protein-like b [Source:ZFIN;Acc:ZDB-GENE-061103-277]
37. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.567 - - - - - 0.716 0.851 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
38. alox5 alox5 406 1.56 - 0.758 - - - - 0.802 - -
39. plekha8 ENSDARG00000040698 431 1.551 - - - - - - 0.702 0.849 - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]
40. magt1 ENSDARG00000058062 3903 1.53 - - - - - - 0.799 0.731 - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
41. pitpnb ENSDARG00000036005 513 1.523 - 0.800 - - - - 0.723 - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
42. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.507 - 0.732 - - - - 0.775 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
43. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.486 - - - - - - 0.763 0.723 - coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
44. elp5 ENSDARG00000067918 541 1.483 - 0.733 - - - - 0.750 - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
45. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.477 - - - - - - 0.754 0.723 - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
46. alpk2 ENSDARG00000079637 1483 1.47 - 0.763 - - - 0.707 - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
47. uros ENSDARG00000027491 1147 1.466 - 0.703 - - - - 0.763 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
48. C12H10orf118 C12H10orf118 964 1.46 - 0.729 - - - - 0.731 - -
49. ahcyl2 ENSDARG00000039343 1210 0.998 0.998 - - - - - - - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
50. cab39 ENSDARG00000043451 1326 0.998 0.998 - - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
51. TOM1L2 ENSDARG00000056394 793 0.997 0.997 - - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
52. naa15a ENSDARG00000003213 5889 0.997 - - - - - - - - 0.997 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
53. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.997 0.997 - - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
54. arhgef12b ENSDARG00000100913 1358 0.997 0.997 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
55. jam2b ENSDARG00000079071 1031 0.996 - - - - - - - - 0.996 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
56. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.996 - - - - - - - - 0.996 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
57. tsen2 ENSDARG00000091851 1467 0.996 - - - - - - - - 0.996 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
58. C24H7orf50 1417 0.996 - - - - - - - - 0.996 chromosome 24 C7orf50 homolog, transcript variant X2
59. ENSDARG00000076021 ENSDARG00000076021 162 0.996 0.996 - - - - - - - -
60. spag1a ENSDARG00000004017 1140 0.996 - - - - - - - - 0.996 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
61. TTC9 ENSDARG00000074363 196 0.996 0.996 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
62. ENSDARG00000090222 ENSDARG00000090222 402 0.996 0.996 - - - - - - - -
63. serpinb1 ENSDARG00000055416 1320 0.996 - - - - - - - - 0.996 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
64. jam3a ENSDARG00000114589 630 0.996 - - - - - - - - 0.996 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
65. smyd5 ENSDARG00000071669 1194 0.996 - - - - - - - - 0.996 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
66. acbd6 ENSDARG00000039456 2355 0.996 - - - - - - - - 0.996 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
67. agpat9 agpat9 938 0.996 - - - - - - - - 0.996
68. zgc:162967 zgc:162967 2132 0.996 - - - - - - - - 0.996
69. si:dkey-10f21.16 si:dkey-10f21.16 252 0.996 0.996 - - - - - - - -
70. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.996 0.996 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
71. NRD1 NRD1 3486 0.996 - - - - - - - - 0.996
72. MRAS_1 ENSDARG00000075285 318 0.996 0.996 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
73. tbc1d19 ENSDARG00000013842 253 0.996 0.996 - - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
74. cdk5r1b ENSDARG00000045087 2075 0.996 - - - - - - - - 0.996 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
75. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.996 - - - - - - - - 0.996 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
76. itsn1 ENSDARG00000000086 684 0.996 0.996 - - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
77. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.996 - - - - - - - - 0.996 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
78. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.996 0.996 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
79. TRIM65 ENSDARG00000077098 991 0.996 - - - - - - - - 0.996 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
80. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.995 - - - - - - - - 0.995 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
81. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.995 - - - - - - - - 0.995 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
82. wu:fj13e08 1223 0.995 0.995 - - - - - - - - wu:fj13e08
83. NDST1 NDST1 1584 0.995 - - - - - - - - 0.995
84. ext2 ENSDARG00000056648 1322 0.995 0.995 - - - - - - - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
85. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.995 - - - - - - - - 0.995 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
86. si:ch211-71m22.1 ENSDARG00000058638 169 0.995 0.995 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
87. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.995 - - - - - - - - 0.995 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
88. poll ENSDARG00000039613 395 0.995 0.995 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
89. kbtbd12 ENSDARG00000001882 1196 0.995 - - - - - - - - 0.995 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
90. ets2 ENSDARG00000103980 451 0.995 0.995 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-050522-552]
91. b4galnt3b ENSDARG00000058939 413 0.995 0.995 - - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
92. evi5b ENSDARG00000070839 239 0.995 0.995 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
93. nab1b ENSDARG00000040700 289 0.995 0.995 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
94. IRF2 ENSDARG00000040465 453 0.995 0.995 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
95. tmed7 ENSDARG00000046022 2435 0.995 - - - - - - - - 0.995 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
96. gltscr1 gltscr1 1487 0.995 - - - - - - - - 0.995
97. wdtc1 ENSDARG00000059760 1218 0.995 0.995 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
98. sos1 ENSDARG00000100503 388 0.995 0.995 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
99. hddc3 ENSDARG00000020473 2814 0.995 - - - - - - - - 0.995 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
100. gata3 ENSDARG00000016526 1857 0.995 - - - - - - - - 0.995 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]

There are 1370 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA