Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for midn

Gene Name Gene ID Reads Annotation
midn ENSDARG00000018524 7559 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]










Genes with expression patterns similar to midn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. midn ENSDARG00000018524 7559 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
2. ANKRD11 ENSDARG00000051886 10024 3.141 - 0.756 - - - 0.771 0.887 0.727 - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
3. hn1b hn1b 7325 3.023 - 0.831 - - 0.709 0.704 0.779 - -
4. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 2.518 - - - - - - 0.831 0.746 0.941 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
5. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 2.394 - - 0.904 - - 0.762 0.728 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
6. si:ch73-46j18.5 ENSDARG00000092467 6002 2.324 - 0.864 - - - 0.729 0.731 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
7. TNRC6A ENSDARG00000079688 14433 2.309 - - - - - 0.727 0.739 - 0.843 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
8. ssbp4 ENSDARG00000056483 10196 2.288 - - - - - 0.738 0.752 0.798 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
9. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.279 - 0.821 - - - 0.730 0.728 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
10. TNRC6C_1 TNRC6C_1 6574 2.236 - 0.796 - - - 0.717 - 0.723 -
11. znf865 ENSDARG00000036698 15532 2.211 0.721 0.775 - - - 0.715 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
12. zgc:123105 ENSDARG00000003127 3061 2.193 0.711 0.731 - - - - 0.751 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
13. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.181 - 0.708 - - - 0.741 0.732 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
14. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.791 - 0.833 - - - - - - 0.958 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
15. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.755 - 0.799 - - - - - - 0.956 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
16. ckap5 ENSDARG00000102674 5068 1.741 0.761 - - - - - - - 0.980 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
17. ubqln4 ENSDARG00000052975 6453 1.721 - - - - - - 0.763 - 0.958 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
18. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 1.716 - - - - - - - 0.760 0.956 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
19. nup155 ENSDARG00000001777 3417 1.697 - - - - - - 0.740 - 0.957 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
20. naa15a ENSDARG00000003213 5889 1.686 - - - - - - 0.729 - 0.957 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
21. hnrnph1l ENSDARG00000005551 8727 1.678 - - 0.911 - - 0.767 - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
22. cul4b ENSDARG00000060510 6053 1.676 - - 0.936 - - - 0.740 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
23. tshz1 ENSDARG00000005026 1948 1.674 - - 0.904 - - - 0.770 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
24. smyd5 ENSDARG00000071669 1194 1.657 - 0.705 - - - - - - 0.952 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
25. vta1 ENSDARG00000013732 6072 1.656 - 0.706 - - - - - - 0.950 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
26. chd4b ENSDARG00000025789 14299 1.641 - 0.852 0.789 - - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
27. pcdh19 ENSDARG00000034344 2378 1.639 - 0.856 - - - - - 0.783 - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
28. CABZ01092303.1 CABZ01092303.1 8825 1.636 - - 0.917 - - - 0.719 - -
29. si:ch211-196l7.4 ENSDARG00000095451 3766 1.619 - 0.869 - - - 0.750 - - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
30. lypla2 ENSDARG00000053656 8971 1.617 - 0.815 - - - 0.802 - - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
31. BX511086.1 BX511086.1 8308 1.611 - 0.856 - - - - 0.755 - -
32. dhx38 ENSDARG00000100013 1854 1.592 - 0.836 - - - - 0.756 - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
33. hoxc8a ENSDARG00000070346 4252 1.573 - - - - - 0.801 0.772 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
34. supt16h ENSDARG00000079949 4755 1.573 - 0.848 - - - - 0.725 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
35. supt6h ENSDARG00000006524 3221 1.571 - 0.803 - - - - - 0.768 - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
36. SSBP4 ENSDARG00000056483 5156 1.567 - - - - - 0.822 0.745 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
37. snrpf ENSDARG00000105037 10241 1.567 - 0.726 - - - - 0.841 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
38. smarce1 ENSDARG00000016871 9628 1.558 - - - - - - 0.805 0.753 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
39. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.556 - 0.850 - - - - 0.706 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
40. mcm7 ENSDARG00000101180 12417 1.552 - - 0.852 - - - 0.700 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
41. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.551 0.715 - - - - - 0.836 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
42. mkrn4 ENSDARG00000028295 2768 1.55 0.710 - 0.840 - - - - - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
43. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.55 - 0.816 - - - - 0.734 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
44. TAF15 ENSDARG00000070019 5102 1.537 - - - - - - 0.758 0.779 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
45. mllt10 ENSDARG00000045401 7557 1.535 - 0.719 - - - - 0.816 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
46. pcbp2 ENSDARG00000099039 4248 1.531 - 0.786 - - - - - 0.745 - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
47. sltm ENSDARG00000052728 6234 1.531 - - - - - 0.770 0.761 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
48. h3f3a 66671 1.531 - - - - - - 0.790 0.741 - H3 histone, family 3A, transcript variant X1
49. smarcd1 ENSDARG00000019004 6028 1.531 - - - - - 0.714 0.817 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
50. tmpob ENSDARG00000022978 8121 1.523 - 0.713 - - - - 0.810 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
51. tpx2 ENSDARG00000078654 8120 1.522 - - 0.805 - - - 0.717 - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
52. uba1 ENSDARG00000037559 11579 1.521 - - - - - 0.740 0.781 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
53. rnf10 ENSDARG00000079687 6768 1.521 - - - - - 0.732 0.789 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
54. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.516 - 0.716 - - - - - 0.800 - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
55. bcas2 ENSDARG00000043631 1971 1.514 - 0.804 - - - - 0.710 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
56. srrm1 ENSDARG00000001244 4972 1.514 - 0.792 - - - - 0.722 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
57. FP016176.1 FP016176.1 7030 1.51 - 0.735 - - - - 0.775 - -
58. dnaja1l dnaja1l 1536 1.508 - 0.793 - - - - - 0.715 -
59. kmt2bb ENSDARG00000060697 5230 1.507 0.718 0.789 - - - - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
60. PAPD5 2090 1.506 - 0.733 - - - - 0.773 - - PAP associated domain containing 5, transcript variant X1
61. ncalda ENSDARG00000070688 5069 1.505 - 0.705 - - - - 0.800 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
62. ext2 ENSDARG00000056648 1322 1.501 - 0.733 - - - - 0.768 - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
63. ilf3b ENSDARG00000105177 9473 1.5 - - - - - - 0.732 0.768 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
64. igf2bp1 ENSDARG00000061478 22924 1.492 - - 0.746 - - 0.746 - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
65. ppih ENSDARG00000041530 2085 1.489 - 0.771 - - - - 0.718 - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
66. fat1 fat1 3934 1.488 - 0.740 - - - - 0.748 - -
67. chtopa ENSDARG00000057234 3287 1.487 - 0.737 - - - - 0.750 - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
68. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.484 - 0.735 - - - - 0.749 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
69. ccnt1 ENSDARG00000017525 1888 1.482 - 0.749 - - - - 0.733 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
70. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.478 - 0.768 - - - - - 0.710 - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
71. grip1 ENSDARG00000015053 1275 1.477 - 0.741 - - - - 0.736 - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
72. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.472 0.756 - - - - - 0.716 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
73. CABZ01080568.2 CABZ01080568.2 2137 1.472 - 0.741 - - - - - 0.731 -
74. hmgb3b ENSDARG00000006408 3442 1.463 - 0.747 - 0.716 - - - - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
75. foxp4 ENSDARG00000076120 9458 1.463 - 0.720 - - - 0.743 - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
76. usp7 ENSDARG00000073710 7017 1.461 - - - - - 0.744 0.717 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
77. bud31 ENSDARG00000017084 3892 1.461 - - - - - - 0.714 0.747 - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
78. acin1b ENSDARG00000026842 3806 1.454 - 0.738 - - - - 0.716 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
79. hnrpl 6412 1.449 - - - - - 0.703 0.746 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
80. anp32e ENSDARG00000054804 11017 1.439 - 0.734 - - - - 0.705 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
81. atad5a ENSDARG00000070568 1840 1.432 - 0.725 0.707 - - - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
82. si:dkey-28b4.8 ENSDARG00000002840 1277 1.427 - - - - - - 0.727 0.700 - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
83. prr12a ENSDARG00000074229 1668 1.425 - - - - - 0.706 0.719 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
84. zmiz1a ENSDARG00000074502 3920 1.424 - - - - - 0.706 0.718 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
85. hnrnpub ENSDARG00000004735 16496 1.422 - - - - - 0.709 0.713 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
86. si:dkey-19e4.5 ENSDARG00000089886 2562 1.404 - - - - - 0.702 0.702 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
87. rpl4 ENSDARG00000041182 18655 0.981 - - - - - - - - 0.981 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
88. pfdn4 ENSDARG00000061228 8266 0.978 - - - - - - - - 0.978 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
89. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.977 - - - - - - - - 0.977 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
90. snx12 ENSDARG00000019060 9563 0.976 - - - - - - - - 0.976 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
91. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.973 - - - - - - - - 0.973 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
92. apex1 ENSDARG00000045843 6345 0.961 - - - - - - - - 0.961 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
93. BAZ2B BAZ2B 3285 0.961 - - - - - - - - 0.961
94. kdm1a ENSDARG00000060679 6152 0.959 - - - - - - - - 0.959 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
95. foxp2 ENSDARG00000005453 1504 0.958 - - - - - - - - 0.958 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
96. cnrip1a ENSDARG00000091683 1491 0.958 - - - - - - - - 0.958 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
97. ash1l ENSDARG00000070981 2520 0.958 - - - - - - - - 0.958 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
98. BX957337.1 BX957337.1 1685 0.958 - - - - - - - - 0.958
99. myh10 ENSDARG00000000103 7522 0.957 - - - - - - - - 0.957 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
100. nup98 ENSDARG00000074955 3998 0.957 - - - - - - - - 0.957 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]

There are 1102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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