Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mid1

Gene Name Gene ID Reads Annotation
mid1 ENSDARG00000060482 154 midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]










Genes with expression patterns similar to mid1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mid1 ENSDARG00000060482 154 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
2. htra1b ENSDARG00000014907 146 2.361 0.741 - - - - 0.768 0.852 - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
3. lig4 ENSDARG00000060620 369 1.878 - 0.981 - - - 0.897 - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
4. fgf21 ENSDARG00000100846 19 1.847 - 0.939 - - - - 0.908 - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
5. C25H11orf74 C25H11orf74 161 1.742 - 0.915 - 0.827 - - - - -
6. C1H19orf53 C1H19orf53 329 1.725 - - - 0.867 - - 0.858 - -
7. tpd52l1 ENSDARG00000042548 61 1.712 0.918 0.794 - - - - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
8. SORCS2 ENSDARG00000077465 185 1.693 - - - - - - 0.872 - 0.821 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
9. ecm2 ENSDARG00000071549 1527 1.691 - - - 0.842 - - - - 0.849 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
10. CR382327.4 CR382327.4 143 1.669 - 0.939 - - - 0.730 - - -
11. SLC36A4 ENSDARG00000039661 175 1.668 0.881 - - - - - - - 0.787 solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
12. arl15a ENSDARG00000076040, ENSDARG00000114295 41 1.667 - 0.860 - - - - - - 0.807 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
13. cradd ENSDARG00000028192 153 1.662 0.741 0.921 - - - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
14. pcdh7b ENSDARG00000060610 400 1.661 - - - 0.841 - - 0.820 - - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
15. glg1b ENSDARG00000101210 177 1.651 - - - 0.891 - - 0.760 - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
16. si:dkey-20i10.7 ENSDARG00000075269 133 1.63 - 0.855 - - - - 0.775 - - si:dkey-20i10.7 [Source:ZFIN;Acc:ZDB-GENE-090313-232]
17. HAUS2 HAUS2 392 1.63 0.884 - - - - - 0.746 - -
18. CU570983.1 CU570983.1 83 1.627 - 0.846 - - - 0.781 - - -
19. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.623 - 0.853 - - - 0.770 - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
20. CABZ01068153.1 CABZ01068153.1 211 1.614 0.885 - - - - 0.729 - - -
21. spon2b ENSDARG00000002732 115 1.608 - - - - - - - 0.737 0.871 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
22. si:ch211-63o20.7 ENSDARG00000042000 93 1.605 0.741 0.864 - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
23. si:rp71-1i20.2 ENSDARG00000043198 113 1.602 - - - - - - 0.848 - 0.754 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
24. bcl11aa ENSDARG00000061352 61 1.601 0.741 0.860 - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
25. ARSI_1 ARSI_1 38 1.601 0.741 0.860 - - - - - - -
26. pls1 ENSDARG00000039272 39 1.598 0.741 0.857 - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
27. si:ch73-257c13.2 ENSDARG00000074305 197 1.597 - - - - - - 0.797 - 0.800 si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
28. zgc:110699 ENSDARG00000017474 381 1.593 - 0.855 - - - - - - 0.738 zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
29. CLCN4 ENSDARG00000035808 397 1.593 - - - 0.757 - - 0.836 - - chloride channel, voltage-sensitive 4 [Source:ZFIN;Acc:ZDB-GENE-061013-353]
30. hgd ENSDARG00000058005 437 1.592 0.759 0.833 - - - - - - - homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
31. arl10 37 1.582 - - - - - 0.768 - - 0.814 ADP-ribosylation factor-like 10
32. fopnl ENSDARG00000071198 1002 1.581 0.761 - - - - - 0.820 - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
33. si:ch211-286e11.3 si:ch211-286e11.3 20 1.576 - - - - - 0.756 0.820 - -
34. trmt5 ENSDARG00000069278 228 1.575 - - - 0.825 - 0.750 - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
35. sh3gl1b ENSDARG00000002642, ENSDARG00000113208 61 1.568 - 0.786 - - - 0.782 - - - SH3-domain GRB2-like 1b [Source:ZFIN;Acc:ZDB-GENE-031001-6]
36. WDSUB1 ENSDARG00000090418 357 1.567 - 0.786 - - - - - 0.781 - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
37. si:dkey-263m6.1 si:dkey-263m6.1 140 1.564 - 0.706 - 0.858 - - - - -
38. si:dkey-32e6.3 ENSDARG00000092934 133 1.56 - 0.824 - - - 0.736 - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
39. si:ch211-87l2.1 si:ch211-87l2.1 2403 1.558 - - - 0.804 - - - - 0.754
40. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 1.554 - - - - - - 0.790 - 0.764 KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
41. cnp ENSDARG00000070822 649 1.554 - - - - - 0.821 - - 0.733 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
42. FP236168.1 FP236168.1 150 1.54 - - - - - 0.807 - - 0.733
43. CSGALNACT1 CSGALNACT1 116 1.539 - - - - - 0.775 - - 0.764
44. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.531 0.741 - - 0.790 - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
45. atg9b ENSDARG00000055292 155 1.525 - 0.704 - - - - 0.821 - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
46. hectd3 ENSDARG00000038905 1170 1.516 - - - 0.744 - - - - 0.772 HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
47. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.514 - - - 0.759 - - 0.755 - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
48. casp3b ENSDARG00000055045 54 1.511 - - - - - 0.736 - 0.775 - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
49. zhx2 zhx2 365 1.51 - - - 0.808 - - 0.702 - -
50. trpv4 ENSDARG00000061941 297 1.509 - - - 0.808 - 0.701 - - - transient receptor potential cation channel, subfamily V, member 4 [Source:ZFIN;Acc:ZDB-GENE-030912-7]
51. paqr7a ENSDARG00000100462 15 1.509 0.741 - - - - 0.768 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
52. mlh3 ENSDARG00000056334 142 1.506 - - - - - 0.753 0.753 - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
53. ZNF337_15 ZNF337_15 135 1.505 0.720 - - - - - 0.785 - -
54. zgc:153258 zgc:153258 868 1.48 - - - - - - 0.718 - 0.762
55. mmrn2b ENSDARG00000073711 391 1.48 0.766 - - - 0.714 - - - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
56. asic4b ENSDARG00000004243 31 1.479 0.741 0.738 - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
57. BX510922.1 ENSDARG00000101184 147 1.472 - 0.738 - - - 0.734 - - -
58. zgc:110269 ENSDARG00000012325 691 1.461 - - - - - - 0.707 - 0.754 zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
59. ptx3a ENSDARG00000068275 589 1.439 - - - - - 0.707 - - 0.732 pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
60. and3 ENSDARG00000056873 22650 1.438 0.720 - - - - 0.718 - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
61. pik3r3a ENSDARG00000103038 1132 1.437 - - - 0.716 - 0.721 - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
62. DBNDD2 DBNDD2 216 1.435 - - - 0.724 - - 0.711 - -
63. si:ch211-260b17.5 2 1 1.000 - - - - - - - - si:ch211-260b17.5
64. ccdc127a 39 1 1.000 - - - - - - - - coiled-coil domain containing 127a, transcript variant X2
65. C20H1orf95 C20H1orf95 12 1 1.000 - - - - - - - -
66. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 1.000 - - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
67. DOCK4 DOCK4 78 1 1.000 - - - - - - - -
68. zgc:113625 ENSDARG00000054160 276 1 1.000 - - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
69. lyve1b ENSDARG00000062483 14 0.98 - 0.980 - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
70. CR388042.1 ENSDARG00000106267 18 0.979 - 0.979 - - - - - - -
71. arl14 ENSDARG00000063223 211 0.962 - 0.962 - - - - - - - ADP-ribosylation factor-like 14 [Source:ZFIN;Acc:ZDB-GENE-070705-288]
72. ldhbb ENSDARG00000071076 31 0.959 - 0.959 - - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
73. si:dkey-22i16.7 ENSDARG00000094910 47 0.959 - 0.959 - - - - - - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
74. st6galnac_1 ENSDARG00000086292 137 0.95 0.950 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
75. crygn2 ENSDARG00000030411 2551 0.95 0.950 - - - - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
76. zp3a.2 ENSDARG00000042130 163 0.95 0.950 - - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
77. supt3h ENSDARG00000098141 18 0.95 0.950 - - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
78. glis3 ENSDARG00000069726 59 0.949 - 0.949 - - - - - - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
79. tmco4 ENSDARG00000078924 330 0.944 - - - 0.944 - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
80. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.942 0.942 - - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
81. ZNF337_16 ZNF337_16 22 0.942 0.942 - - - - - - - -
82. tas1r3 ENSDARG00000006341 3 0.939 - 0.939 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
83. ryr2b ENSDARG00000003706 6 0.939 - 0.939 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
84. FANCA ENSDARG00000098241 39 0.939 - 0.939 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
85. si:ch73-91k6.1 18 0.939 - 0.939 - - - - - - - si:ch73-91k6.1
86. LECT2 LECT2 4 0.939 - 0.939 - - - - - - -
87. 5S_rRNA_15 5S_rRNA_15 9 0.939 - 0.939 - - - - - - -
88. KLHDC3 ENSDARG00000102772 14 0.939 - 0.939 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
89. CABZ01079251.1 ENSDARG00000100498 38 0.939 - 0.939 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
90. si:ch211-161m3.4 ENSDARG00000103375 10 0.939 - 0.939 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
91. robo2 ENSDARG00000014891, ENSDARG00000078366 23 0.939 - 0.939 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
92. nog2 ENSDARG00000043066 233 0.939 - 0.939 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
93. polr2b ENSDARG00000098783 90 0.939 - 0.939 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
94. SNORD65_1 SNORD65_1 25 0.939 - 0.939 - - - - - - -
95. nrp2a ENSDARG00000096546 2 0.939 - 0.939 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
96. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 0.939 - 0.939 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
97. si:dkeyp-13d11.2_1 6 0.939 - 0.939 - - - - - - - si:dkeyp-13d11.2
98. CU469532.1 CU469532.1 31 0.939 - 0.939 - - - - - - -
99. ZCCHC6 2 0.939 - 0.939 - - - - - - - zinc finger, CCHC domain containing 6
100. GPC5 GPC5 11 0.939 - 0.939 - - - - - - -

There are 1348 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA