Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mex3b

Gene Name Gene ID Reads Annotation
mex3b ENSDARG00000058369 1867 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]










Genes with expression patterns similar to mex3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mex3b ENSDARG00000058369 1867 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
2. her4.1 ENSDARG00000056732 1264 4.653 - - 0.709 - 0.766 0.716 0.847 0.761 0.854 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
3. plp1a ENSDARG00000103732 3544 4.229 - - - 0.752 - 0.864 0.936 0.869 0.808 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
4. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 4.066 - - 0.714 - - 0.853 0.914 0.854 0.731 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
5. fam60al 2846 3.935 - - 0.787 - 0.780 0.824 0.820 0.724 - family with sequence similarity 60, member A, like
6. AKT3 AKT3 1729 3.533 - - - - - 0.755 0.941 0.891 0.946
7. msi1 ENSDARG00000010710 2634 3.5 - - 0.788 - - - 0.945 0.873 0.894 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
8. st8sia2 ENSDARG00000018788 2183 3.407 - - 0.736 - - 0.797 0.925 - 0.949 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
9. ADAM22 ENSDARG00000060532 2259 3.401 - - - - - 0.895 0.931 0.748 0.827 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
10. lhx5 ENSDARG00000057936 785 3.354 - - - - - 0.822 0.896 0.780 0.856 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
11. si:ch73-21g5.7 ENSDARG00000093156 9412 3.348 - - 0.771 - - 0.887 0.936 0.754 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
12. nrn1a ENSDARG00000071860 1311 3.34 - - - - - 0.861 0.886 0.725 0.868 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
13. slc29a1a ENSDARG00000101289 2074 3.277 - - 0.789 - 0.845 0.776 - - 0.867 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
14. zic1 ENSDARG00000015567 2520 3.252 - - 0.768 - 0.784 0.851 0.849 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
15. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.239 - - - 0.861 - 0.728 0.809 - 0.841 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
16. mdkb ENSDARG00000020708 5393 3.239 - - 0.714 - - 0.912 0.849 - 0.764 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
17. ZFHX3 ENSDARG00000103057 7759 3.225 - - 0.731 0.789 - 0.796 0.909 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
18. xpr1 xpr1 840 3.19 - - - - - 0.738 0.768 0.780 0.904
19. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.169 - - - - 0.721 - 0.924 0.707 0.817 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
20. tox3 ENSDARG00000073957 3075 3.142 - - - - 0.768 - 0.709 0.752 0.913 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
21. plagx ENSDARG00000036855 3768 3.124 - - 0.753 - 0.761 - 0.766 - 0.844 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
22. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.088 - - 0.718 - 0.746 - 0.872 0.752 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
23. mta2 ENSDARG00000013031 2932 3.072 - - 0.747 - - - 0.748 0.788 0.789 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
24. DTX4 ENSDARG00000076302 2642 2.733 - - - - - 0.922 0.909 0.902 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
25. stmn1b ENSDARG00000033655 9491 2.677 - - - - - 0.879 0.927 - 0.871 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
26. st8sia5 ENSDARG00000036584 529 2.669 - - - - - 0.879 0.896 - 0.894 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
27. her15.2 her15.2 1701 2.642 - - - - - 0.890 0.911 - 0.841
28. cnrip1a ENSDARG00000091683 1491 2.591 - - - - - 0.895 0.933 0.763 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
29. stmn2a ENSDARG00000033234 2272 2.591 - - - - - 0.872 0.895 - 0.824 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
30. cspg5a ENSDARG00000069981 1699 2.577 - - 0.774 - - - 0.932 - 0.871 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
31. nadl1.2 695 2.575 - - - - - 0.868 0.835 - 0.872 neural adhesion molecule L1.2, transcript variant X1
32. si:ch211-133l11.10 ENSDARG00000005626 381 2.558 - - - - - 0.834 0.865 - 0.859 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
33. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.558 - - - 0.748 - 0.890 0.920 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
34. st18 663 2.558 - - - - - 0.871 0.917 0.770 - suppression of tumorigenicity 18, zinc finger
35. ptbp2b ENSDARG00000015901 2458 2.557 - - - - - 0.848 0.891 0.818 - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
36. thsd7ba ENSDARG00000095022 231 2.552 - - - - - 0.852 0.812 - 0.888 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
37. aldocb ENSDARG00000019702 2111 2.546 - 0.822 - - - 0.795 0.929 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
38. vezf1a ENSDARG00000008247 1449 2.522 - - - - 0.814 0.815 0.893 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
39. insm1a ENSDARG00000091756 1838 2.521 - - - - - - 0.868 0.714 0.939 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
40. add2 ENSDARG00000074581 1402 2.516 - - - - - 0.882 0.930 0.704 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
41. myt1b ENSDARG00000102879 5411 2.516 - - - - - 0.760 0.919 - 0.837 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
42. TMEM57 TMEM57 260 2.51 - - - - - 0.845 0.908 0.757 -
43. tox4 tox4 1671 2.508 - - 0.702 - - 0.911 - - 0.895
44. sox2 ENSDARG00000070913 2763 2.505 - - 0.722 - - 0.888 0.895 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
45. npas3b npas3b 1446 2.5 - - 0.739 - - - 0.925 - 0.836
46. cd99l2 ENSDARG00000056722 5036 2.5 - - - - - 0.840 0.790 - 0.870 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
47. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.495 - - - - - 0.908 0.844 - 0.743 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
48. tuba1c ENSDARG00000055216 8384 2.494 - - - - 0.769 0.780 0.945 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
49. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.493 - - - - - 0.887 0.712 - 0.894 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
50. C7H4orf48 C7H4orf48 1455 2.492 - - - - - 0.849 0.886 0.757 -
51. memo1 ENSDARG00000010823 1681 2.49 0.713 - - - - 0.905 - - 0.872 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
52. hmp19 2554 2.488 - - - - 0.711 0.852 0.925 - - HMP19 protein
53. nexmifb ENSDARG00000029296 416 2.488 - 0.732 - - - 0.898 0.858 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
54. SNAP91 ENSDARG00000098809 556 2.487 - - - - - 0.703 0.912 - 0.872 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
55. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.486 - - - - 0.775 0.800 0.911 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
56. CABZ01111990.1 CABZ01111990.1 4374 2.479 - - - - - - 0.935 0.734 0.810
57. fscn1a ENSDARG00000059680 3999 2.465 - - - - - 0.907 - 0.737 0.821 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
58. dpysl4 ENSDARG00000103490 534 2.461 - - - - - 0.848 0.910 0.703 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
59. dpysl5a ENSDARG00000011141 1827 2.456 - - 0.725 - - 0.814 0.917 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
60. irx5a ENSDARG00000034043 1694 2.45 - - - - - 0.774 0.780 - 0.896 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
61. atp1b4 ENSDARG00000053262 1337 2.449 - - - 0.723 - 0.874 0.852 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
62. ndrg4 ENSDARG00000103937 1234 2.445 - - - - - 0.803 0.922 0.720 - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
63. pou3f2a ENSDARG00000070220 817 2.439 - - - - 0.814 - 0.895 0.730 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
64. pacsin1b ENSDARG00000042128 1051 2.425 - - 0.758 - - 0.709 0.958 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
65. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.415 - - - 0.810 - 0.870 0.735 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
66. rap2ip rap2ip 681 2.413 - - - - - 0.788 0.923 0.702 -
67. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.409 - - - - - 0.834 0.868 0.707 -
68. TUBB8P7_1 TUBB8P7_1 2722 2.403 - - - - - 0.733 0.933 0.737 -
69. ptprna ENSDARG00000058646 1327 2.395 - - 0.771 - 0.744 - 0.880 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
70. pax6a ENSDARG00000103379 3061 2.391 - - - - 0.759 - 0.879 0.753 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
71. mllt11 ENSDARG00000071026 2518 2.39 - - - - - 0.776 0.902 0.712 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
72. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 2.386 - - - - 0.759 - 0.771 - 0.856 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
73. hnrnpub ENSDARG00000004735 16496 2.386 - - - 0.755 - 0.757 0.874 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
74. papss1 ENSDARG00000057099 809 2.381 - - - - - - 0.727 0.736 0.918 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
75. slc1a2b ENSDARG00000102453 3136 2.378 - - - - - 0.739 0.875 - 0.764 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
76. nova1 ENSDARG00000020178 4129 2.377 - - - - 0.709 0.759 0.909 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
77. ZNF281 ZNF281 1946 2.375 - - - 0.796 0.740 - 0.839 - -
78. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.373 - - - - 0.790 0.794 0.789 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
79. nbeaa ENSDARG00000070080 862 2.372 - - - - 0.725 - 0.924 0.723 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
80. amph ENSDARG00000007663 599 2.372 - - - - - 0.758 0.899 0.715 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
81. adcyap1b ENSDARG00000027740 1539 2.371 - - - - - 0.753 0.909 0.709 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
82. fez1 ENSDARG00000023174 701 2.362 - - - - - 0.776 0.783 0.803 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
83. rcor2 ENSDARG00000008278 1678 2.35 - - - - - 0.829 0.734 0.787 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
84. dacha ENSDARG00000010132 648 2.344 - 0.713 - - - 0.798 0.833 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
85. Sep-03 Sep-03 1124 2.335 - - 0.728 - - 0.710 0.897 - -
86. UBL7 UBL7 197 2.332 - 0.741 - - - 0.780 0.811 - -
87. ccdc28b ENSDARG00000011222 528 2.316 - - - - - 0.740 0.865 0.711 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
88. gipc1 ENSDARG00000104483 2913 2.3 - - 0.730 - - 0.741 0.829 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
89. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 2.294 - - 0.722 - - 0.780 0.792 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
90. cadm4 ENSDARG00000040291 2284 2.292 - - - - - 0.780 0.728 - 0.784 cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
91. pebp1 ENSDARG00000042069 6651 2.287 - - - - 0.758 - 0.771 - 0.758 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
92. nrsn1 ENSDARG00000111235 123 2.272 - - - - - 0.843 0.726 0.703 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
93. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.262 - - - 0.712 - 0.710 0.840 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
94. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 2.249 - - - 0.713 - - 0.793 0.743 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
95. SH2B2 ENSDARG00000090421 245 2.237 - 0.806 - - - 0.718 0.713 - - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
96. sumo3a ENSDARG00000028119 13447 2.233 - - - - - 0.825 0.704 0.704 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
97. irx1a ENSDARG00000101831 644 2.229 - - 0.712 - 0.793 - - 0.724 - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
98. med24 ENSDARG00000099431 893 2.217 - - 0.709 - - 0.777 0.731 - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
99. celf3a ENSDARG00000034668 2432 2.206 - - - - - 0.767 0.737 0.702 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
100. SBK1 SBK1 154 2.17 - 0.744 - - - - 0.701 0.725 -

There are 2693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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