Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mespba

Gene Name Gene ID Reads Annotation
mespba ENSDARG00000030347, ENSDARG00000110553 1 mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]










Genes with expression patterns similar to mespba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mespba ENSDARG00000030347, ENSDARG00000110553 1 3 - - 1.000 1.000 - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
2. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 2 - - - 1.000 - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
3. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
4. crispld1a ENSDARG00000077275 7 1.916 - - 1.000 - - - 0.916 - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
5. pias4b ENSDARG00000042215 12 1.83 - - - 1.000 - - 0.830 - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
6. pnp4b ENSDARG00000029230 6 1.763 - - - 0.763 - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
7. F2RL3 ENSDARG00000079399 29 1.721 - - - 0.721 - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
8. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - - - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
9. dand5 ENSDARG00000036471 8 1 - - - - - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
10. zgc:136639os zgc:136639os 2 1 - - 1.000 - - - - - -
11. cx28.9 ENSDARG00000041797 12 1 - - - - - - 1.000 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
12. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
13. zgc:112234_4 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
14. crtac1b ENSDARG00000102517 0 1 - - 1.000 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
15. PPHLN1 ENSDARG00000045692 4 1 - - - - - - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
16. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
17. SYNGAP1 SYNGAP1 4 1 - - 1.000 - - - - - -
18. OXLD1 8 1 - - - 1.000 - - - - - oxidoreductase-like domain containing 1, transcript variant X1
19. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - 1.000 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
20. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
21. xpnpep2 ENSDARG00000026017 16 1 - - 1.000 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
22. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
23. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
24. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
25. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
26. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
27. isg15 ENSDARG00000086374 8 1 - - - 1.000 - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
28. wu:fe37d09 wu:fe37d09 0 1 - - 1.000 - - - - - -
29. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
30. lrit1a ENSDARG00000019179 9 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
31. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
32. C11H1orf116 C11H1orf116 9 1 - - 1.000 - - - - - -
33. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
34. zgc:173619_1 2 1 - - - - - - 1.000 - - zgc:173619
35. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
36. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - 1.000 - - - - - -
37. GPR116_3 GPR116_3 9 1 - - - 1.000 - - - - -
38. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
39. gabrr1 ENSDARG00000043902 1 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
40. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - 1.000 - - - - - -
41. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
42. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
43. prg4a ENSDARG00000010482 10 1 - - 1.000 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
44. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
45. NLRC5 ENSDARG00000024631 11 1 - - 1.000 - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
46. BX914198.1 BX914198.1 5 1 - - - 1.000 - - - - -
47. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - - - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
48. il10 ENSDARG00000078147 3 1 - - - - - - 1.000 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
49. si:dkey-47k16.4 ENSDARG00000113005 87 1 - - 1.000 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
50. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
51. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
52. NUGGC NUGGC 9 1 - - - - - - 1.000 - -
53. si:dkey-29j8.5 si:dkey-29j8.5 9 1 - - - 1.000 - - - - -
54. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
55. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
56. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
57. si:ch211-250m6.8 si:ch211-250m6.8 51 1 - - - - - - 1.000 - -
58. gper gper 4 1 - - - - - - 1.000 - -
59. C17H8orf74 C17H8orf74 4 1 - - - - - - 1.000 - -
60. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
61. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - 1.000 - - - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
62. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
63. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
64. slc25a29 ENSDARG00000057352 9 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
65. OLFM4 OLFM4 6 1 - - 1.000 - - - - - -
66. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
67. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
68. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - - 1.000 - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
69. si:dkey-242h9.4 4 1 - - - - - - 1.000 - - si:dkey-242h9.4
70. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
71. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
72. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
73. matn1 ENSDARG00000030215 11 1 - - - 1.000 - - - - - matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
74. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
75. BX936443.2 BX936443.2 28 1 - - 1.000 - - - - - -
76. ttll2 ENSDARG00000077853 9 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
77. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - 1.000 - - si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
78. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
79. 5S_rRNA_27 5S_rRNA_27 2 1 - - 1.000 - - - - - -
80. cfhl3 ENSDARG00000104205, ENSDARG00000115822 1 1 - - - - - - 1.000 - - complement factor H like 3 [Source:ZFIN;Acc:ZDB-GENE-050208-423]
81. slc6a19b ENSDARG00000056719 140 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
82. si:ch211-113a14.17 15 1 - - - - - - 1.000 - - si:ch211-113a14.17
83. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
84. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
85. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 1 - - 1.000 - - - - - -
86. grifin ENSDARG00000033382 141 1 - - - - - - 1.000 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
87. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
88. si:dkey-126h10.2 si:dkey-126h10.2 3 1 - - - 1.000 - - - - -
89. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
90. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
91. DNM2 DNM2 2 1 - - - - - - 1.000 - -
92. CR382372.1 ENSDARG00000096684 2 1 - - 1.000 - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
93. cabp5a ENSDARG00000002576 14 1 - - - - - - 1.000 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
94. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
95. CR854923.1 CR854923.1 18 1 - - 1.000 - - - - - -
96. wasb ENSDARG00000026350 139 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
97. cx31.7 ENSDARG00000058064 8 1 - - - 1.000 - - - - - connexin 31.7 [Source:ZFIN;Acc:ZDB-GENE-050616-3]
98. CR450785.2 ENSDARG00000111875 1 1 - - 1.000 - - - - - -
99. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
100. shank3a ENSDARG00000063332 5 1 - - 1.000 - - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]

There are 569 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA