Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mesdc2

Gene Name Gene ID Reads Annotation
mesdc2 776 mesoderm development candidate 2, transcript variant X2










Genes with expression patterns similar to mesdc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mesdc2 776 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mesoderm development candidate 2, transcript variant X2
2. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.798 - - - - - 0.958 0.840 - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
3. magt1 ENSDARG00000058062 3903 1.79 - - - - - 0.898 - 0.892 - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
4. CABZ01005777.1 CABZ01005777.1 505 1.734 - - - - - 0.967 - 0.767 -
5. rassf9 ENSDARG00000074721 448 1.733 - - - 0.771 - 0.962 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
6. mif ENSDARG00000071336 1328 1.733 - 0.753 - - - 0.980 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
7. slc39a10 ENSDARG00000005823 2634 1.728 - 0.839 - - - 0.889 - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
8. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.708 - 0.807 - - - 0.901 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
9. nhp2l1b nhp2l1b 3898 1.705 - - - 0.775 - 0.930 - - -
10. C2H6orf52 C2H6orf52 2847 1.695 - 0.785 - - - 0.910 - - -
11. s100z ENSDARG00000038729 442 1.691 - - - - - 0.917 0.774 - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
12. CR847496.2 ENSDARG00000116070 802 1.686 - - - - - 0.978 0.708 - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
13. C13H4orf32 C13H4orf32 174 1.685 - - - - - 0.984 0.701 - -
14. smurf2 ENSDARG00000038067 2057 1.678 - 0.710 - - - 0.968 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
15. hiat1a ENSDARG00000013117 607 1.673 - - - 0.739 - 0.934 - - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
16. chmp5b ENSDARG00000103718 1608 1.673 - - - - - 0.819 - 0.854 - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
17. mapk13 ENSDARG00000058470 1001 1.672 - - - 0.755 - 0.917 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
18. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.672 - - - - - 0.971 0.701 - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
19. clk4b ENSDARG00000005908 915 1.67 - - - - - 0.954 0.716 - - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
20. ppp1r12a ENSDARG00000010784 4333 1.669 - - - - - 0.922 0.747 - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
21. optc ENSDARG00000014358 1295 1.667 - 0.701 - - - 0.966 - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
22. nrg1 ENSDARG00000104314 1081 1.666 - - - 0.747 - 0.919 - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
23. klhl11 ENSDARG00000045130 800 1.663 - - - 0.706 - 0.957 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
24. smek1 ENSDARG00000042187 3509 1.662 - 0.759 - - - 0.903 - - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
25. CACUL1 ENSDARG00000021885 691 1.655 - - - - - 0.945 0.710 - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
26. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.654 - - - 0.738 - 0.916 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
27. guk1a ENSDARG00000030340 517 1.65 - - - 0.743 - 0.907 - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
28. INO80B ENSDARG00000062749 844 1.649 - - - - - 0.937 0.712 - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
29. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.636 - 0.725 - - - 0.911 - - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
30. frmd6 ENSDARG00000002332 2698 1.636 - 0.815 - - - 0.821 - - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
31. mrpl24 ENSDARG00000019222 798 1.626 - 0.708 - - - 0.918 - - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
32. ccnk ENSDARG00000034146 1255 1.626 - 0.788 - - - 0.838 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
33. kif18a ENSDARG00000008022 546 1.618 - 0.865 - - - - 0.753 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
34. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.603 - 0.714 - - - 0.889 - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
35. atl3 ENSDARG00000004270 2806 1.597 - - - 0.707 - 0.890 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
36. tns1 tns1 5891 1.595 - 0.782 - - - 0.813 - - -
37. stard3 ENSDARG00000017809 727 1.591 - - - 0.707 - 0.884 - - - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
38. ticrr ENSDARG00000045605 739 1.579 - 0.703 - - - 0.876 - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
39. TSPAN4 TSPAN4 941 1.551 - 0.750 - - - 0.801 - - -
40. rpf2 ENSDARG00000043960 2719 1.542 - 0.719 - 0.823 - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
41. yif1a ENSDARG00000019636 2215 1.541 - - - - - 0.752 - 0.789 - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
42. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.537 - 0.718 - - - 0.819 - - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
43. bccip ENSDARG00000004948 593 1.532 - - - 0.731 - - 0.801 - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
44. spop ENSDARG00000100519 177 1.524 - 0.734 - 0.790 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
45. C24H8orf33 C24H8orf33 406 1.515 - 0.790 - 0.725 - - - - -
46. heg heg 559 1.487 - 0.767 - 0.720 - - - - -
47. EEF1E1 ENSDARG00000071774 3806 1.483 - 0.730 - - - 0.753 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
48. stx12 ENSDARG00000098813 2576 1.476 - 0.775 - 0.701 - - - - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
49. zcchc24 ENSDARG00000078026 1619 1.471 - 0.740 - - - - 0.731 - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
50. DST ENSDARG00000101858 4395 1.47 - - - 0.748 - 0.722 - - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
51. chtopa ENSDARG00000057234 3287 1.461 - 0.712 - - - 0.749 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
52. si:dkey-258f14.2 ENSDARG00000094874 297 1.461 - 0.713 - - - - 0.748 - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
53. si:dkey-172m14.1 ENSDARG00000052693 875 1.452 - - - - - 0.709 0.743 - - si:dkey-172m14.1 [Source:ZFIN;Acc:ZDB-GENE-060526-221]
54. stat5.1 stat5.1 3337 1.446 - 0.704 - - - - 0.742 - -
55. GDPD2 ENSDARG00000073870 229 0.997 - - - - - 0.997 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
56. si:dkey-115f9.2 si:dkey-115f9.2 18 0.993 - - - - - 0.993 - - -
57. egr3 ENSDARG00000089156 71 0.993 - - - - - 0.993 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
58. si:dkey-57h18.2 33 0.993 - - - - - 0.993 - - - si:dkey-57h18.2, transcript variant X1
59. zgc:110286 92 0.993 - - - - - 0.993 - - - zgc:110286
60. pcgf5b ENSDARG00000052388 163 0.993 - - - - - 0.993 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
61. slc6a19b ENSDARG00000056719 140 0.993 - - - - - 0.993 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
62. CR759816.1 ENSDARG00000098977 27 0.993 - - - - - 0.993 - - -
63. inhbab ENSDARG00000024759 29 0.993 - - - - - 0.993 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
64. bace2 ENSDARG00000044781 17 0.993 - - - - - 0.993 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
65. ankrd39 ENSDARG00000041350 73 0.993 - - - - - 0.993 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
66. TDRD15 TDRD15 46 0.993 - - - - - 0.993 - - -
67. CIR1 ENSDARG00000099733 66 0.993 - - - - - 0.993 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
68. si:ch211-105d18.6 si:ch211-105d18.6 59 0.992 - - - - - 0.992 - - -
69. CU929417.2 CU929417.2 94 0.992 - - - - - 0.992 - - -
70. rhoab ENSDARG00000094673 26 0.992 - - - - - 0.992 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
71. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.992 - - - - - 0.992 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
72. sowahcb ENSDARG00000059582 178 0.992 - - - - - 0.992 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
73. crybb3 ENSDARG00000041301 48 0.992 - - - - - 0.992 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
74. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.992 - - - - - 0.992 - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
75. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.992 - - - - - 0.992 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
76. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.991 - - - - - 0.991 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
77. CABZ01072083.1 CABZ01072083.1 56 0.991 - - - - - 0.991 - - -
78. traf2b ENSDARG00000101036 429 0.991 - - - - - 0.991 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
79. CR759791.3 CR759791.3 134 0.991 - - - - - 0.991 - - -
80. SLC22A15 ENSDARG00000055445 111 0.991 - - - - - 0.991 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
81. znf750 ENSDARG00000102267 327 0.991 - - - - - 0.991 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
82. CU929328.1 ENSDARG00000105332 31 0.991 - - - - - 0.991 - - -
83. sez6a ENSDARG00000100876 35 0.991 - - - - - 0.991 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
84. ccdc173 ENSDARG00000077928 260 0.991 - - - - - 0.991 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
85. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.991 - - - - - 0.991 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
86. adam15 ENSDARG00000089213 359 0.99 - - - - - 0.990 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
87. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.99 - - - - - 0.990 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
88. PCSK6 ENSDARG00000104574 710 0.99 - - - - - 0.990 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
89. dre-mir-429b ENSDARG00000082968 212 0.99 - - - - - 0.990 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
90. CU302436.3 CU302436.3 174 0.99 - - - - - 0.990 - - -
91. selj 884 0.989 - - - - - 0.989 - - - selenoprotein J
92. si:ch211-207c6.14 si:ch211-207c6.14 19 0.989 - - - - - 0.989 - - -
93. ngly1 ENSDARG00000003205 733 0.989 - - - - - 0.989 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
94. si:zfos-364h11.1 99 0.989 - - - - - 0.989 - - - si:zfos-364h11.1, transcript variant X4
95. slco2a1 ENSDARG00000061896 58 0.989 - - - - - 0.989 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
96. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.989 - - - - - 0.989 - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
97. psmg2 ENSDARG00000035987 1938 0.988 - - - - - 0.988 - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
98. tmem53 ENSDARG00000038789 411 0.988 - - - - - 0.988 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
99. RECQL4 ENSDARG00000077516 462 0.987 - - - - - 0.987 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
100. ccnt2a ENSDARG00000036685 168 0.987 - - - - - 0.987 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]

There are 1226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA