Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for meox1

Gene Name Gene ID Reads Annotation
meox1 ENSDARG00000007891, ENSDARG00000115382 1584 mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]










Genes with expression patterns similar to meox1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
2. vwde ENSDARG00000103443 5758 3.133 0.743 0.766 - - - 0.711 0.913 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
3. txlnbb ENSDARG00000076241 6396 2.393 - 0.708 - - - 0.845 0.840 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. ntd5 ENSDARG00000040944 4988 2.375 - - - - 0.902 - 0.772 - 0.701 ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
5. tnnc1b ENSDARG00000037539 13945 2.351 - 0.706 - - - 0.726 0.919 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
6. sptb ENSDARG00000030490 7128 2.341 - 0.711 - - - 0.757 0.873 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
7. alpk3a ENSDARG00000078989 1992 2.324 - 0.770 - - - 0.701 0.853 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
8. fitm1 ENSDARG00000056464 1759 2.293 - 0.725 - - - 0.793 0.775 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
9. cd248b ENSDARG00000077938 2561 2.285 0.851 0.720 - - - - 0.714 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
10. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.263 - 0.768 - - - 0.709 0.786 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
11. limch1a ENSDARG00000074275 2981 2.263 - 0.737 - - - 0.769 0.757 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
12. fxr1 ENSDARG00000022968 2831 2.258 0.711 - - - - 0.776 0.771 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
13. cacng1 cacng1 3118 2.254 - 0.749 - - - 0.724 0.781 - -
14. cct8 ENSDARG00000008243 6843 2.251 - 0.740 - - - 0.716 0.795 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
15. PTP4A3 ENSDARG00000039997 3814 2.228 - 0.784 - - - 0.737 0.707 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
16. MYOM3 2720 2.218 - 0.734 - - - 0.745 0.739 - - myomesin 3, transcript variant X2
17. hoxd13a ENSDARG00000059256 1190 1.803 - - 0.915 - 0.888 - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
18. BX511121.1 ENSDARG00000029997 1774 1.735 - - 0.861 - 0.874 - - - -
19. asb5b ENSDARG00000053222 1207 1.73 - - - - - 0.818 0.912 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
20. asns ENSDARG00000016375 1606 1.727 - 0.857 - - - - 0.870 - - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
21. frem2a ENSDARG00000076856 11022 1.708 - - 0.788 - 0.920 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
22. stac3 ENSDARG00000098883 1765 1.705 - - - - - 0.802 0.903 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
23. crabp2b ENSDARG00000030449 3091 1.704 0.781 - - - 0.923 - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
24. zgc:158296 ENSDARG00000070923 3935 1.699 - - - - - 0.824 0.875 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
25. zgc:92518 ENSDARG00000016343 3837 1.694 - - - - - 0.844 0.850 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. crabp1b ENSDARG00000035904 2753 1.693 - - 0.751 - 0.942 - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
27. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.687 - - - - - 0.804 0.883 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
28. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.683 - - - 0.845 0.838 - - - - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
29. smyd1a ENSDARG00000009280 1503 1.678 - - - - - 0.825 0.853 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
30. hoxa11a ENSDARG00000104162 283 1.675 - - - 0.858 0.817 - - - - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
31. zgc:92113 1738 1.67 - - - - - 0.778 0.892 - - zgc:92113
32. bag2 ENSDARG00000035005 1402 1.654 - - - - - 0.784 0.870 - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
33. bag3 ENSDARG00000039486 1087 1.651 - - - - - 0.843 0.808 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
34. si:dkey-65j6.2 ENSDARG00000103586 533 1.645 - - - - - 0.783 0.862 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
35. hoxa13a ENSDARG00000100312 543 1.644 - - - - 0.895 - - - 0.749 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
36. ckmt2 ckmt2 768 1.638 - - - - - 0.744 0.894 - -
37. rtn2b ENSDARG00000057027 1391 1.637 - - - - - 0.777 0.860 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
38. myl9a ENSDARG00000038123 1207 1.635 - - - 0.742 0.893 - - - - myosin, light chain 9a, regulatory [Source:ZFIN;Acc:ZDB-GENE-041010-120]
39. serpinf1 ENSDARG00000069048 2083 1.63 - 0.761 - - - - 0.869 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
40. acsl1 acsl1 4216 1.628 - - - - - 0.737 0.891 - -
41. smtnl1 ENSDARG00000041257 7410 1.623 - - - - - 0.758 0.865 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
42. nexn ENSDARG00000057317 10972 1.619 - - - - - 0.735 0.884 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
43. nid1a ENSDARG00000068710 3948 1.618 - - - - - 0.732 0.886 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
44. ppp1r14c ENSDARG00000077341 1587 1.611 - - - - 0.848 - 0.763 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
45. nars ENSDARG00000061100 2948 1.609 - 0.812 - - - - 0.797 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
46. hhatla ENSDARG00000039051 6598 1.609 - 0.739 - - - - 0.870 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
47. CR392006.1 CR392006.1 1401 1.608 - - - - - 0.756 0.852 - -
48. myhc4 ENSDARG00000035438 1322 1.608 - - - - - 0.777 0.831 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
49. MUSTN1 MUSTN1 1882 1.607 - - - - - 0.729 0.878 - -
50. MYOM1 MYOM1 3870 1.602 - 0.779 - - - - 0.823 - -
51. ATP5J_2 ATP5J_2 2381 1.602 - 0.715 - - - - 0.887 - -
52. EHBP1L1 EHBP1L1 2500 1.602 - - - - - 0.768 0.834 - -
53. timm8b ENSDARG00000055708 7291 1.602 - 0.764 - - - - 0.838 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
54. hsp90aa1.1 ENSDARG00000010478 47784 1.601 - - - - - 0.759 0.842 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
55. cxcl12a ENSDARG00000037116 5433 1.6 - - - - - 0.724 0.876 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
56. crip2 ENSDARG00000070670 4844 1.6 - - - - - 0.833 0.767 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
57. MYOF ENSDARG00000006112 436 1.599 - - - 0.750 0.849 - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
58. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.598 - - - - - 0.845 0.753 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
59. xirp2a ENSDARG00000071113 7113 1.597 - - - - - 0.744 0.853 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
60. fam212aa 1132 1.596 - - - - - 0.890 0.706 - - family with sequence similarity 212, member Aa, transcript variant X1
61. CU633479.5 ENSDARG00000114818 1815 1.595 - 0.754 - - - - 0.841 - -
62. cilp ENSDARG00000053362 1429 1.591 - - - - - 0.831 0.760 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
63. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.589 - - - - - 0.800 0.789 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
64. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.589 - - - - - 0.783 0.806 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
65. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 1.586 - - - - - 0.797 0.789 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
66. loxl5b ENSDARG00000076904 468 1.586 - - - - 0.805 - 0.781 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
67. anxa6 ENSDARG00000013335 3588 1.585 - - - - - 0.822 0.763 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
68. lrrc17 ENSDARG00000037960 1585 1.582 - - 0.783 - - - - - 0.799 leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
69. fermt2 ENSDARG00000020242 9351 1.581 - - - - - 0.781 0.800 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
70. PTGES3L PTGES3L 4801 1.581 - - - - - 0.821 0.760 - -
71. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.576 - 0.723 0.853 - - - - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
72. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.575 - - - - - 0.734 0.841 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
73. kazald2 ENSDARG00000078518 3062 1.572 - - - - 0.826 - - - 0.746 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
74. NOG NOG 324 1.57 - - - - - 0.784 0.786 - -
75. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.569 - - - - - 0.745 0.824 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
76. ablim2 ENSDARG00000055223 1934 1.569 - - - - - 0.819 0.750 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
77. jph1a ENSDARG00000058603 2852 1.565 - - - - - 0.787 0.778 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
78. ryr3 ENSDARG00000071331 6795 1.565 - - - - - 0.800 0.765 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
79. sp5l ENSDARG00000115868 361 1.564 - - - 0.705 0.859 - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
80. musk ENSDARG00000098764 438 1.564 - - - - - 0.734 0.830 - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
81. lims2 ENSDARG00000014976 1248 1.564 - - - - - 0.707 0.857 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
82. PITPNC1 ENSDARG00000099260 1096 1.563 - - - - - 0.835 0.728 - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
83. myoz2b ENSDARG00000037266 2139 1.557 - 0.728 - - - - 0.829 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
84. ogn 5002 1.555 - - 0.792 - 0.763 - - - - osteoglycin
85. six1b ENSDARG00000026473 1908 1.554 0.784 - - - - - 0.770 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
86. homer3 homer3 1974 1.554 - 0.758 - 0.796 - - - - -
87. CR847973.1 ENSDARG00000115516 8754 1.554 - - - - - 0.816 0.738 - -
88. CU638714.1 ENSDARG00000100303 2132 1.551 - 0.701 - - - - 0.850 - -
89. phex ENSDARG00000062363 1413 1.551 - - - - - 0.727 0.824 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
90. foxj1a ENSDARG00000101919 1095 1.547 - - 0.778 - 0.769 - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
91. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.547 - 0.733 - - - - 0.814 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
92. STIM2 STIM2 644 1.545 - - - - - 0.727 0.818 - -
93. has2 ENSDARG00000036987 349 1.543 0.726 - - - 0.817 - - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
94. gypc ENSDARG00000041546 1487 1.543 0.710 - - - - - 0.833 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
95. prkrirb 330 1.542 - 0.719 - 0.823 - - - - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) b
96. COL13A1 1565 1.539 - 0.831 - - 0.708 - - - - collagen, type XIII, alpha 1, transcript variant X1
97. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.537 - 0.773 - - - - 0.764 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
98. flncb ENSDARG00000018820 5595 1.536 - - - - - 0.771 0.765 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
99. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.536 - - 0.780 - - 0.756 - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
100. dyrk2 ENSDARG00000094646 2163 1.535 - 0.787 - - - - 0.748 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]

There are 1246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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