Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mef2ca

Gene Name Gene ID Reads Annotation
mef2ca ENSDARG00000029764 18547 myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]










Genes with expression patterns similar to mef2ca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mef2ca ENSDARG00000029764 18547 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
2. tnni2b.1 ENSDARG00000035958 51597 3.413 0.751 - 0.852 - 0.886 0.924 - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
3. ryr1b ENSDARG00000023797 5693 3.376 0.748 0.854 0.810 - - 0.964 - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
4. txlnbb ENSDARG00000076241 6396 3.258 0.792 0.853 0.822 - 0.791 - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
5. tnnc1b ENSDARG00000037539 13945 3.251 - 0.823 0.871 - 0.840 - - - 0.717 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
6. chrnd ENSDARG00000019342 2728 3.219 0.744 0.806 0.793 - - 0.876 - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
7. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.184 0.815 0.861 0.749 - 0.759 - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
8. ITGB1BP2 ENSDARG00000030176 2472 3.141 0.770 0.843 0.733 - 0.795 - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
9. AIMP1 ENSDARG00000060036 4136 3.112 0.746 0.811 0.701 - 0.854 - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
10. klhl40a ENSDARG00000039052 2537 3.109 0.799 0.840 0.702 - 0.768 - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
11. zgc:153662 zgc:153662 4604 2.967 0.744 0.782 0.712 - 0.729 - - - -
12. cav3 ENSDARG00000024141 14906 2.558 0.920 - - - 0.728 - - 0.910 - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
13. si:ch211-207e19.11 si:ch211-207e19.11 9604 2.548 0.776 - 0.896 - 0.876 - - - -
14. tmem38a ENSDARG00000024047 41883 2.544 0.885 - 0.837 - 0.822 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
15. zgc:66286 zgc:66286 118947 2.54 0.882 - 0.754 - 0.904 - - - -
16. klhl41b ENSDARG00000006757 10762 2.523 0.796 - 0.828 - 0.899 - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
17. tmem161a ENSDARG00000012790 16094 2.489 0.824 - 0.854 - 0.811 - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
18. nexn ENSDARG00000057317 10972 2.482 0.796 - 0.812 - 0.874 - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
19. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 2.477 0.733 - 0.832 - 0.912 - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
20. unc45b ENSDARG00000008433 8298 2.464 0.740 0.853 - - 0.871 - - - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
21. pes ENSDARG00000018902 3286 2.453 - 0.759 - - - 0.856 - 0.838 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
22. actn3b ENSDARG00000001431 15747 2.436 0.822 0.849 - - 0.765 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
23. smyd2b ENSDARG00000005629 8181 2.434 0.782 0.830 - - 0.822 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
24. ntmt1 ENSDARG00000022399 5779 2.433 0.732 0.851 - - 0.850 - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
25. desma ENSDARG00000058656 30292 2.432 0.893 - 0.775 - 0.764 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
26. cacng1 cacng1 3118 2.422 0.821 0.846 - - 0.755 - - - -
27. pygma ENSDARG00000055518 15972 2.414 0.832 0.829 - - - - - - 0.753 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
28. usp28 ENSDARG00000008880 1850 2.414 0.746 0.784 - - - 0.884 - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
29. alpk3a ENSDARG00000078989 1992 2.392 0.724 0.851 - - 0.817 - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
30. CR388002.1 CR388002.1 1998 2.38 0.785 0.862 - - 0.733 - - - -
31. myl1 ENSDARG00000014196 98943 2.365 0.909 - 0.740 - 0.716 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
32. rp42-pen rp42-pen 3395 2.358 - 0.825 0.781 - 0.752 - - - -
33. pbxip1b ENSDARG00000011824 3726 2.356 0.706 - - - 0.802 0.848 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
34. trim63 trim63 2437 2.35 0.762 - 0.733 - - - - 0.855 -
35. hsp90aa1.1 ENSDARG00000010478 47784 2.335 0.718 - 0.710 - 0.907 - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
36. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.334 0.795 - 0.839 - 0.700 - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
37. MYOM3 2720 2.327 - 0.789 0.792 - 0.746 - - - - myomesin 3, transcript variant X2
38. hfe2 4113 2.323 0.793 0.814 - - 0.716 - - - - hemochromatosis type 2
39. PTGES3L PTGES3L 4801 2.322 0.732 - 0.752 - 0.838 - - - -
40. cfl2 ENSDARG00000014106 8051 2.322 0.714 0.836 0.772 - - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
41. SPEG SPEG 4017 2.321 0.746 - 0.801 - 0.774 - - - -
42. srl ENSDARG00000104587 11126 2.317 0.769 0.842 - - 0.706 - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
43. pbxip1a ENSDARG00000071015 4960 2.317 0.790 0.821 - - 0.706 - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
44. limch1a ENSDARG00000074275 2981 2.312 0.706 0.820 0.786 - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
45. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.31 0.702 - 0.814 - 0.794 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
46. TMPO TMPO 3264 2.306 0.768 0.820 0.718 - - - - - -
47. myod1 ENSDARG00000030110 6019 2.305 0.763 0.768 - - 0.774 - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
48. klhl41a ENSDARG00000068888 1034 2.304 0.710 0.746 - - - 0.848 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
49. fitm1 ENSDARG00000056464 1759 2.298 0.744 0.820 0.734 - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
50. chrna1 ENSDARG00000009021 2931 2.282 0.745 0.804 0.733 - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
51. DNAJA4 ENSDARG00000051762 5657 2.274 0.717 0.764 0.793 - - - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
52. xirp2a ENSDARG00000071113 7113 2.272 0.761 0.809 - - 0.702 - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
53. tpm3 ENSDARG00000005162 86049 2.268 - 0.711 - 0.727 0.830 - - - - tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
54. sgca ENSDARG00000074156 2418 2.256 - 0.796 0.721 - 0.739 - - - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
55. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 2.254 0.704 0.801 0.749 - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
56. adss ENSDARG00000002071 5497 2.232 0.741 - 0.777 - 0.714 - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
57. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 2.23 0.730 - 0.739 - 0.761 - - - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
58. klhl40b ENSDARG00000019125 3633 2.22 0.765 - 0.735 - 0.720 - - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
59. bag3 ENSDARG00000039486 1087 2.147 0.700 0.715 0.732 - - - - - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
60. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 1.946 - - - - - 0.962 0.984 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
61. tnnt2c ENSDARG00000032242 28801 1.844 0.916 - - - 0.928 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
62. fam32al fam32al 5716 1.816 - - - - - 0.844 0.972 - -
63. map2k6 ENSDARG00000099184 8741 1.806 - - - - - - 0.973 0.833 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
64. mt-nd5 ENSDARG00000063921 21268 1.788 - - - 0.845 - 0.943 - - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
65. ola1 ENSDARG00000044565 22424 1.787 - - - 0.798 - - 0.989 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
66. cmn ENSDARG00000055527 14039 1.737 - - 0.772 - - - 0.965 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
67. nop56 ENSDARG00000012820 15231 1.731 - 0.768 - - - - 0.963 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
68. pgam2 ENSDARG00000057571 23387 1.719 0.741 - - - - - 0.978 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
69. myl10 ENSDARG00000062592 101207 1.711 - - 0.778 - 0.933 - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
70. lamb2 ENSDARG00000002084 3265 1.699 - 0.806 - - - 0.893 - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
71. tpm2 ENSDARG00000104682 36853 1.683 0.799 - - - 0.884 - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
72. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.68 0.819 - - - 0.861 - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
73. agk ENSDARG00000009837, ENSDARG00000113514 811 1.669 - 0.769 - - - - - 0.900 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
74. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.665 - - 0.725 - - 0.940 - - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
75. txlnba ENSDARG00000020594 9385 1.656 - - 0.800 - 0.856 - - - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
76. fam96b 2255 1.644 - 0.763 - - - - - 0.881 - family with sequence similarity 96, member B
77. myhz2 ENSDARG00000012944 69921 1.644 0.839 - - - 0.805 - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
78. zgc:92518 ENSDARG00000016343 3837 1.643 0.831 - - - 0.812 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
79. klhl31 ENSDARG00000039066 13656 1.642 - - 0.757 - 0.885 - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
80. casq1b ENSDARG00000018105 2643 1.638 0.724 - - - - 0.914 - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
81. BX324201.1 BX324201.1 3302 1.636 0.754 - - - - 0.882 - - -
82. smyd1b ENSDARG00000091253 4964 1.63 0.815 0.815 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
83. tob1b ENSDARG00000021372 7048 1.628 - - - - 0.755 0.873 - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
84. rplp1 ENSDARG00000021864 127841 1.625 0.735 - - - - 0.890 - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
85. FHOD3_1 FHOD3_1 983 1.623 0.813 0.810 - - - - - - -
86. aldh7a1 ENSDARG00000018426 4637 1.621 0.716 - - - - - - 0.905 - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
87. aldoab ENSDARG00000034470 88942 1.619 0.885 - - - 0.734 - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
88. C13H10orf71 3489 1.619 0.785 0.834 - - - - - - - chromosome 13 C10orf71 homolog
89. qars ENSDARG00000010316 2715 1.614 - 0.712 - - - - - 0.902 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
90. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.611 - - - - - 0.826 - 0.785 - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
91. pcmt ENSDARG00000015201 5132 1.61 - 0.709 - - - 0.901 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
92. srpk3 ENSDARG00000005916 1546 1.609 0.775 0.834 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
93. ttnb ttnb 73721 1.606 0.803 - - - 0.803 - - - -
94. vcl vcl 6667 1.604 0.789 0.815 - - - - - - -
95. CU638714.1 ENSDARG00000100303 2132 1.601 - 0.840 - - 0.761 - - - -
96. mylz3 ENSDARG00000017441 303597 1.597 0.891 - 0.706 - - - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
97. acta1b ENSDARG00000055618 195597 1.597 0.882 - 0.715 - - - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
98. sptb ENSDARG00000030490 7128 1.596 0.781 0.815 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
99. NRAP ENSDARG00000009341 3565 1.592 0.801 0.791 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
100. BX294434.1 ENSDARG00000061272 6493 1.591 0.796 0.795 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]

There are 1007 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA