Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for med18

Gene Name Gene ID Reads Annotation
med18 ENSDARG00000041237 247 mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]










Genes with expression patterns similar to med18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. med18 ENSDARG00000041237 247 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
2. si:ch211-102c2.4 ENSDARG00000079387 101 2.59 - 0.868 - - 0.931 - - 0.791 - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
3. top1mt ENSDARG00000027824, ENSDARG00000104809 195 1.691 - - - - - 0.753 0.938 - - DNA topoisomerase I mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040624-2]
4. nkx2.9 ENSDARG00000020332 357 1.684 - - - - - - 0.792 0.892 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
5. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.677 - - - - 0.862 - 0.815 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
6. cyp2p10 ENSDARG00000042990 176 1.671 - 0.860 - - 0.811 - - - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
7. si:dkey-163m14.7 65 1.67 - 0.787 - - 0.883 - - - - si:dkey-163m14.7
8. mhc1zea ENSDARG00000001470 184 1.667 - - - - 0.874 - 0.793 - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
9. ZNF337_7 ZNF337_7 198 1.65 - - - - 0.895 - 0.755 - -
10. MAP6 MAP6 643 1.64 - - - - - - 0.779 0.861 -
11. si:ch211-117c9.5 ENSDARG00000071235 154 1.64 - - - - - - 0.822 0.818 - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
12. gphnb ENSDARG00000100851 118 1.639 - - - - 0.895 0.744 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
13. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 1.636 0.727 - - - 0.909 - - - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
14. gdap1l1 ENSDARG00000028628 233 1.628 - 0.797 - - - - 0.831 - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
15. FEZ2_1 FEZ2_1 153 1.625 - - - - - - 0.810 0.815 -
16. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.621 - - - - - - 0.837 0.784 - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
17. frmd4bb ENSDARG00000076496 18 1.604 0.711 - - - - - - 0.893 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
18. SMUG1 ENSDARG00000101308 236 1.603 - 0.740 - - - - 0.863 - - single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9473]
19. gata1a ENSDARG00000013477, ENSDARG00000117116 902 1.6 - 0.761 - - - - - 0.839 - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
20. slc12a5b ENSDARG00000078187 329 1.594 - - - - 0.784 - 0.810 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
21. npas3b npas3b 1446 1.589 - 0.837 - - - - 0.752 - -
22. lrp2bp ENSDARG00000040478 21 1.582 - 0.814 - - - 0.768 - - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
23. pard3 pard3 161 1.568 - - - - - 0.773 0.795 - -
24. si:dkey-14k9.3 ENSDARG00000045595 256 1.558 - 0.821 - - - - 0.737 - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
25. si:ch211-26b3.4 ENSDARG00000075491 50 1.553 - 0.787 - - - - 0.766 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
26. 5S_rRNA_22 5S_rRNA_22 45 1.552 - 0.736 - - - - 0.816 - -
27. khdrbs2 ENSDARG00000069469 160 1.549 0.774 - - - 0.775 - - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
28. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.547 - 0.787 - - - - 0.760 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
29. sv2bb ENSDARG00000060711 196 1.544 - - - - 0.801 - 0.743 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
30. CR538726.1 ENSDARG00000097179 321 1.544 - - - - 0.735 - 0.809 - -
31. NF1 NF1 62 1.543 - - - - - 0.729 0.814 - -
32. sb:cb54 sb:cb54 475 1.535 - - - - 0.783 - 0.752 - -
33. klc3 ENSDARG00000055965 116 1.525 - - - - 0.818 - 0.707 - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
34. ikzf1 ENSDARG00000013539 94 1.525 0.711 0.814 - - - - - - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
35. SPIN4 SPIN4 120 1.522 - - - - 0.725 - 0.797 - -
36. FBXO38 ENSDARG00000006924 307 1.518 - - - - 0.757 - 0.761 - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
37. CU019646.1 ENSDARG00000117632 223 1.511 - - - - 0.720 - - 0.791 - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
38. vrk3 ENSDARG00000036056 424 1.502 - - - - - 0.711 - 0.791 - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
39. f2rl1.1 ENSDARG00000068856 47 1.497 - 0.767 - - - 0.730 - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
40. RASGRF2 RASGRF2 644 1.496 - 0.754 - - - - 0.742 - -
41. zeb1a ENSDARG00000016788 48 1.496 0.736 - - - - - 0.760 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
42. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1.492 - 0.787 - - - - - 0.705 - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
43. abhd3 ENSDARG00000018809 168 1.486 - 0.764 - - - - 0.722 - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
44. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1.471 0.711 - - - - - 0.760 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
45. ANGEL1 ENSDARG00000077567 38 1.464 - 0.704 - - - - 0.760 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
46. zgc:194285 ENSDARG00000078423 27 1.449 0.711 0.738 - - - - - - - zgc:194285 [Source:ZFIN;Acc:ZDB-GENE-081022-97]
47. clu ENSDARG00000010434 498 1.448 - - - - - - 0.711 0.737 - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
48. PLEKHM3 ENSDARG00000030633 496 1.432 - 0.716 - - - - 0.716 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
49. KCNS1 KCNS1 24 1.422 0.711 - - - - - 0.711 - -
50. im:7160159 im:7160159 294 1.415 - - - - 0.714 - - 0.701 -
51. znf438 ENSDARG00000061311 524 0.957 - - - - - - - 0.957 - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
52. mlpha ENSDARG00000070991, ENSDARG00000112518, ENSDARG00000114121 198 0.936 - - - - 0.936 - - - - melanophilin a [Source:ZFIN;Acc:ZDB-GENE-050208-724]
53. colm colm 36 0.935 - - - - 0.935 - - - -
54. lancl1 ENSDARG00000013741 563 0.935 - 0.935 - - - - - - - LanC antibiotic synthetase component C-like 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040924-1]
55. si:dkey-7e14.3 ENSDARG00000086055 50 0.935 - - - - 0.935 - - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
56. sema3e ENSDARG00000036571, ENSDARG00000116446 115 0.935 - - - - 0.935 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
57. abhd13 ENSDARG00000059209 43 0.933 - - - - 0.933 - - - - abhydrolase domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-051120-54]
58. ogfrl1 ENSDARG00000061223 64 0.933 - - - - 0.933 - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
59. si:ch211-218c6.9 si:ch211-218c6.9 40 0.932 - - - - 0.932 - - - -
60. CABZ01117977.1 CABZ01117977.1 9 0.931 - - - - 0.931 - - - -
61. lrrtm4l1 ENSDARG00000080015 9 0.931 - - - - 0.931 - - - - leucine rich repeat transmembrane neuronal 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-080327-15]
62. CU184872.1 CU184872.1 15 0.931 - - - - 0.931 - - - -
63. GRAMD2_1 GRAMD2_1 12 0.931 - - - - 0.931 - - - -
64. pglyrp2 ENSDARG00000062998 11 0.931 - - - - 0.931 - - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
65. KCNJ12 KCNJ12 17 0.931 - - - - 0.931 - - - -
66. herc3 ENSDARG00000075887 41 0.93 - - - - 0.930 - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
67. pitpnab ENSDARG00000044091 306 0.928 - 0.928 - - - - - - - phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]
68. U3_5 U3_5 67 0.928 - - - - 0.928 - - - -
69. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.926 - - - - 0.926 - - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
70. si:dkey-253a1.2 si:dkey-253a1.2 52 0.926 - - - - 0.926 - - - -
71. wu:fi34b01 38 0.923 - - - - 0.923 - - - - wu:fi34b01
72. CR387997.1 CR387997.1 190 0.921 - 0.921 - - - - - - -
73. CU694368.1 CU694368.1 56 0.92 - - - - 0.920 - - - -
74. ASAP1 ASAP1 47 0.918 - - - - 0.918 - - - -
75. si:dkey-148e3.2 si:dkey-148e3.2 117 0.918 - - - - 0.918 - - - -
76. gadd45aa ENSDARG00000043581 114 0.916 - - - - 0.916 - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
77. ccdc6b ENSDARG00000017595 828 0.915 - - - - - - 0.915 - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
78. lrrc4.2 ENSDARG00000003020 235 0.912 - - - - 0.912 - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
79. CABZ01054962.1 CABZ01054962.1 91 0.912 - - - - 0.912 - - - -
80. si:dkey-189o20.1 si:dkey-189o20.1 47 0.912 - - - - 0.912 - - - -
81. si:dkey-32e6.3 ENSDARG00000092934 133 0.911 - - - - 0.911 - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
82. plxnb3 ENSDARG00000032990 98 0.911 - 0.911 - - - - - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
83. FAM196A 82 0.91 - - - - - - 0.910 - - family with sequence similarity 196 member A
84. ddit3 ENSDARG00000059836 334 0.91 - - - - - - - 0.910 - DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]
85. si:ch211-135f11.1 166 0.909 - - - - 0.909 - - - - si:ch211-135f11.1, transcript variant X3
86. stx12l ENSDARG00000044605 99 0.907 - - - - - - 0.907 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
87. SLC16A3 ENSDARG00000045051 83 0.906 - - - - 0.906 - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
88. si:ch73-389b16.2 ENSDARG00000103802 340 0.904 - - - - - - 0.904 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
89. hbegfb ENSDARG00000031246 236 0.903 - - - - - - - 0.903 - heparin-binding EGF-like growth factor b [Source:ZFIN;Acc:ZDB-GENE-070820-6]
90. fam5ca fam5ca 76 0.903 - - - - 0.903 - - - -
91. CU207301.4 CU207301.4 192 0.903 - - - - 0.903 - - - -
92. si:dkey-100n10.2 101 0.9 - - - - - - 0.900 - - si:dkey-100n10.2
93. MFAP4_7 MFAP4_7 43 0.9 - - - - 0.900 - - - -
94. TRAK1 212 0.9 - - - - - - 0.900 - - trafficking protein, kinesin binding 1, transcript variant X6
95. slc9a3.1 ENSDARG00000058498 46 0.899 - - - - 0.899 - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
96. samd11 ENSDARG00000077852 631 0.899 - 0.899 - - - - - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
97. zgc:193811 ENSDARG00000076745 72 0.897 - - - - - - 0.897 - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
98. ksr2 ENSDARG00000094526 134 0.896 - - - - - - 0.896 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
99. slx4 ENSDARG00000061414, ENSDARG00000093798 44 0.895 - - - - 0.895 - - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
100. EP400 ENSDARG00000100965 45 0.895 - 0.895 - - - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]

There are 1555 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA