Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for me3

Gene Name Gene ID Reads Annotation
me3 ENSDARG00000002305 3305 malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]










Genes with expression patterns similar to me3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. me3 ENSDARG00000002305 3305 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
2. Mar-06 Mar-06 953 2.536 0.954 - - - - - 0.719 0.863 -
3. dvl2 ENSDARG00000056184 1525 2.524 0.926 - - - - 0.850 - 0.748 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
4. ck2b ck2b 781 2.514 0.964 - - - - 0.797 0.753 - -
5. sf3a3 ENSDARG00000100114 4511 2.476 - - - - - 0.847 0.798 0.831 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
6. riok3 ENSDARG00000042751 3163 2.461 - 0.999 - - - - 0.746 0.716 - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
7. frmd6 ENSDARG00000002332 2698 2.404 0.841 - - - - 0.825 0.738 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
8. dnajc5ga ENSDARG00000041896 1478 2.308 - - - - - 0.736 0.734 0.838 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
9. dyrk1b ENSDARG00000070187 2777 1.946 0.948 0.998 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
10. cox7c ENSDARG00000104537 12169 1.855 - 0.986 - - - - 0.869 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
11. fbl ENSDARG00000053912 5891 1.853 0.857 0.996 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
12. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.851 - 0.988 - - - 0.863 - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
13. ap2m1b ENSDARG00000033899 317 1.848 0.981 - - - - - - 0.867 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
14. exd3 ENSDARG00000063140 119 1.845 0.986 - - - - - - 0.859 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
15. tmem180 tmem180 430 1.841 0.965 - - - - 0.876 - - -
16. gpr37l1a ENSDARG00000006079 422 1.828 0.972 - - - - - - 0.856 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
17. MRPL42 ENSDARG00000079391 1403 1.821 - 0.998 - - - 0.823 - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
18. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.817 - 0.998 - - - 0.819 - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
19. cpt1a cpt1a 674 1.801 0.940 - - - - - - 0.861 -
20. psmd13 ENSDARG00000016239 4229 1.794 - 0.996 - - - - 0.798 - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
21. smim8 ENSDARG00000071040 622 1.788 0.941 - - - - 0.847 - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
22. PRSS23 ENSDARG00000055786 564 1.786 0.961 - - - - 0.825 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
23. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.78 0.973 - - - - 0.807 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
24. cwc25 ENSDARG00000003382 2134 1.771 0.913 - - - - - - 0.858 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
25. CABZ01073174.1 CABZ01073174.1 581 1.77 0.893 - - - - - - 0.877 -
26. nanos1 ENSDARG00000109337 2494 1.769 - 0.999 - - - - - 0.770 - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
27. hccsa hccsa 869 1.763 - 0.999 - - - - 0.764 - -
28. pole ENSDARG00000058533, ENSDARG00000115430 381 1.761 0.973 - - - - - - 0.788 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
29. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 1.756 0.966 - - - - 0.790 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
30. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.754 0.914 - - - - 0.840 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
31. smurf2 ENSDARG00000038067 2057 1.751 - - - - - 0.850 - 0.901 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
32. utp3 ENSDARG00000056720 922 1.749 0.930 - - - - - - 0.819 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
33. kpnb3 ENSDARG00000040245 7967 1.747 0.945 - - - - - 0.802 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
34. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.747 0.951 - - - - 0.796 - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
35. gpx7 ENSDARG00000091511 3045 1.743 0.900 - - - - 0.843 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
36. itgb4 ENSDARG00000028507 2568 1.742 0.958 - - - - 0.784 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
37. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.734 - 0.998 - - - 0.736 - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
38. slc20a1b ENSDARG00000010641 2564 1.734 0.948 - - - - - 0.786 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
39. s100v1 ENSDARG00000070427 6633 1.734 - 0.983 - - - 0.751 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
40. CABZ01057013.1 CABZ01057013.1 1308 1.727 0.916 - - - - 0.811 - - -
41. fzd7b ENSDARG00000027589 2562 1.726 0.967 - - - - - 0.759 - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
42. trim55b ENSDARG00000058158 586 1.724 0.871 - - - - 0.853 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
43. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.718 - 0.996 - - - - 0.722 - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
44. capn7 ENSDARG00000102987 386 1.715 0.857 - - - - - - 0.858 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
45. prrg4 ENSDARG00000030753 1008 1.714 0.862 - - - - - - 0.852 - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
46. ssbp1 ENSDARG00000039350 809 1.701 - - - - - - 0.858 0.843 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
47. cnbpb ENSDARG00000070922 14606 1.698 - 0.959 - - - - 0.739 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
48. NBEAL1 ENSDARG00000099547 1112 1.694 0.892 - - - - 0.802 - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
49. TMEM261 TMEM261 6529 1.692 0.944 - - - - - 0.748 - -
50. rnf13 ENSDARG00000019438 1560 1.692 0.819 - - - - - - 0.873 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
51. larp6 1695 1.691 0.942 - - - - 0.749 - - - La ribonucleoprotein domain family, member 6
52. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.69 - - - - - 0.881 - 0.809 - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
53. arpc4 ENSDARG00000054063 6150 1.689 - 0.885 - - - 0.804 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
54. adamts1 ENSDARG00000103519 539 1.686 0.848 - - - - 0.838 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
55. zgc:100918 ENSDARG00000087243 5451 1.684 0.909 - - - - 0.775 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
56. gstm gstm 4064 1.674 - - - - - 0.869 - 0.805 -
57. rfx2 ENSDARG00000013575 1275 1.668 - - - - - 0.812 - 0.856 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
58. TMEM14A ENSDARG00000095157 611 1.667 0.879 - - - - - - 0.788 - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
59. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.661 0.949 - - - - - 0.712 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
60. hibadhb ENSDARG00000007959 4858 1.658 - 0.881 - - - - 0.777 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
61. C25H12orf73 C25H12orf73 2031 1.657 0.917 - - - - - 0.740 - -
62. PVRL4_1 PVRL4_1 702 1.654 0.850 - - - - 0.804 - - -
63. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.653 0.944 - - - - - 0.709 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
64. pelo ENSDARG00000055477 1927 1.652 - - - - - - 0.793 0.859 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
65. ccdc25 ENSDARG00000021753 3837 1.648 - - - - - 0.850 0.798 - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
66. rab5c ENSDARG00000026712 4733 1.646 0.861 - - - - 0.785 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
67. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.646 - - - - - 0.750 - 0.896 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
68. arcn1a ENSDARG00000002792 2847 1.644 0.920 - - - - 0.724 - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
69. C1H4orf27 C1H4orf27 1961 1.637 0.860 - - - - - - 0.777 -
70. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.637 - - - - - 0.800 - 0.837 - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
71. rhot2 ENSDARG00000056328 1123 1.636 - - - - - 0.771 - 0.865 - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
72. mdm4 ENSDARG00000057513 1954 1.636 - - - - - 0.821 - 0.815 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
73. eif2b4 ENSDARG00000014004 2213 1.629 - - - - - 0.878 0.751 - - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
74. ZNF576 ZNF576 1447 1.628 - - - - - 0.817 - 0.811 -
75. bc2 5213 1.625 0.813 - - - - 0.812 - - - putative breast adenocarcinoma marker
76. znf503 ENSDARG00000018492 5974 1.623 0.883 - - - - - 0.740 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
77. qki2 ENSDARG00000010018 2230 1.615 0.776 - - - - - - 0.839 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
78. mrpl54 ENSDARG00000071468 2715 1.614 - - - - - - 0.797 0.817 - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
79. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.612 - - - - - 0.739 - 0.873 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
80. samd11 ENSDARG00000077852 631 1.612 - - - - - 0.832 - 0.780 - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
81. dnajc7_1 ENSDARG00000058148 687 1.61 - - - - - - 0.731 0.879 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
82. adipor1b ENSDARG00000042717 1348 1.602 - - - - - 0.819 - 0.783 - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
83. brox ENSDARG00000013659 1334 1.601 - - - - - 0.876 - 0.725 - BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
84. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.6 - - - - - 0.779 - 0.821 - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
85. BX649282.1 ENSDARG00000105704 347 1.599 - - - - - 0.875 0.724 - -
86. MRPL52 ENSDARG00000090568 4402 1.596 - - - - - - 0.789 0.807 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
87. pip5k1aa ENSDARG00000100396 1644 1.591 - - - - - 0.831 0.760 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
88. eef1db ENSDARG00000030053 5185 1.591 - - - - - 0.834 0.757 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
89. degs2 ENSDARG00000042544 1912 1.584 0.864 - - - - 0.720 - - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
90. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.583 0.866 - - - - - 0.717 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
91. ube2j1 ENSDARG00000033489 497 1.58 - - - - - 0.813 - 0.767 - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
92. slc22a7a ENSDARG00000056028 2426 1.575 - - - - - 0.772 - 0.803 - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
93. entpd1 ENSDARG00000045066 2930 1.574 - - - - - - 0.794 0.780 - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
94. s100z ENSDARG00000038729 442 1.573 0.834 - - - - 0.739 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
95. lrpprc ENSDARG00000043970 3847 1.573 - - - - - - 0.721 0.852 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
96. ddx49 ENSDARG00000012899 1604 1.568 0.839 - - - - - 0.729 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
97. mrpl40 ENSDARG00000043554 2198 1.565 - - - - - 0.846 0.719 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
98. mrpl38 ENSDARG00000039667 1145 1.564 0.849 - - - - - 0.715 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
99. sigmar1 ENSDARG00000011418 1240 1.564 0.852 - - - - 0.712 - - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
100. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.563 0.860 - - - - - 0.703 - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]

There are 1869 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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