Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for me2_1

Gene Name Gene ID Reads Annotation
me2_1 ENSDARG00000100718, ENSDARG00000114435 52 malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]










Genes with expression patterns similar to me2_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. me2_1 ENSDARG00000100718, ENSDARG00000114435 52 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
2. si:ch211-110p13.9 ENSDARG00000093821 82 1.709 0.876 0.833 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
3. NLRC5 ENSDARG00000024631 11 1.702 0.860 - - - 0.842 - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
4. slco1c1 ENSDARG00000016749 30 1.69 0.860 0.830 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
5. PCDH8 ENSDARG00000102185 52 1.641 - 0.832 - - 0.809 - - - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
6. si:ch73-155e10.1 si:ch73-155e10.1 13 1.621 0.723 0.898 - - - - - - -
7. CU571260.1 CU571260.1 163 1.595 0.860 - - - 0.735 - - - -
8. FP085391.2 FP085391.2 85 1.582 0.723 - - - 0.859 - - - -
9. MLLT4 MLLT4 67 1.568 0.723 - - - 0.845 - - - -
10. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.556 0.723 0.833 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
11. cyp2aa2 ENSDARG00000104811 77 1.556 0.723 0.833 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
12. PDZD4 ENSDARG00000090564 131 1.515 0.808 - - - 0.707 - - - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
13. dusp22b ENSDARG00000039850 133 1.503 0.766 0.737 - - - - - - - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
14. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.468 0.760 0.708 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
15. APOLD1_1 APOLD1_1 590 1.433 0.703 0.730 - - - - - - -
16. CABZ01068274.1 CABZ01068274.1 193 1 1.000 - - - - - - - -
17. arl13a ENSDARG00000052575 25 1 1.000 - - - - - - - - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
18. egf ENSDARG00000052739, ENSDARG00000114581 141 0.955 - 0.955 - - - - - - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
19. si:dkey-60a16.1 ENSDARG00000037073 163 0.94 0.940 - - - - - - - - si:dkey-60a16.1 [Source:ZFIN;Acc:ZDB-GENE-040724-244]
20. mipep ENSDARG00000055344 63 0.934 - 0.934 - - - - - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
21. grhpra ENSDARG00000068264 49 0.934 - 0.934 - - - - - - - glyoxylate reductase/hydroxypyruvate reductase a [Source:ZFIN;Acc:ZDB-GENE-040724-230]
22. nrn1b ENSDARG00000042656 44 0.92 - 0.920 - - - - - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
23. si:ch211-264e16.1 ENSDARG00000068947 1358 0.912 - 0.912 - - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
24. zbtb34 ENSDARG00000013492 32 0.907 - - - - 0.907 - - - - zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
25. abrab ENSDARG00000033854 380 0.905 - 0.905 - - - - - - - actin binding Rho activating protein b [Source:ZFIN;Acc:ZDB-GENE-040822-7]
26. ddr2a ENSDARG00000100693 236 0.903 - 0.903 - - - - - - - discoidin domain receptor tyrosine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-090316-2]
27. snoMBII-202_2 snoMBII-202_2 72 0.898 - 0.898 - - - - - - -
28. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.894 - 0.894 - - - - - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
29. SNCAIP ENSDARG00000100198 522 0.893 - 0.893 - - - - - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
30. NPAS3 ENSDARG00000109820 362 0.892 0.892 - - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
31. sclt1 ENSDARG00000057248 339 0.891 0.891 - - - - - - - - sodium channel and clathrin linker 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3278]
32. hpse ENSDARG00000063634, ENSDARG00000112827 35 0.876 0.876 - - - - - - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
33. ANKRD13D ENSDARG00000098140 88 0.876 0.876 - - - - - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
34. si:ch211-102c2.4 ENSDARG00000079387 101 0.876 0.876 - - - - - - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
35. ADM ADM 122 0.876 0.876 - - - - - - - -
36. CT027778.1 CT027778.1 265 0.876 0.876 - - - - - - - -
37. si:ch1073-228p2.2 si:ch1073-228p2.2 24 0.876 0.876 - - - - - - - -
38. dync2i1 dync2i1 83 0.876 0.876 - - - - - - - -
39. polg ENSDARG00000060951 33 0.876 0.876 - - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
40. nmu ENSDARG00000043299 67 0.876 0.876 - - - - - - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
41. KCNG2 ENSDARG00000035961 58 0.876 0.876 - - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
42. EXD1 ENSDARG00000098669 27 0.876 0.876 - - - - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
43. CABZ01114089.1 CABZ01114089.1 127 0.876 0.876 - - - - - - - -
44. mtmr10 ENSDARG00000010601 37 0.876 - 0.876 - - - - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
45. ncam2 ENSDARG00000017466 175 0.876 0.876 - - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
46. hspb2 ENSDARG00000052450, ENSDARG00000114010 139 0.876 0.876 - - - - - - - - heat shock protein, alpha-crystallin-related, b2 [Source:ZFIN;Acc:ZDB-GENE-050417-260]
47. nlgn3b ENSDARG00000062376 171 0.876 0.876 - - - - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
48. ift20 ENSDARG00000040556 285 0.876 - 0.876 - - - - - - - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
49. kalrna ENSDARG00000104119 8 0.876 0.876 - - - - - - - - kalirin RhoGEF kinase a [Source:ZFIN;Acc:ZDB-GENE-100921-4]
50. NSUN6 ENSDARG00000103478 29 0.876 0.876 - - - - - - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
51. morn5 ENSDARG00000033610, ENSDARG00000110509 21 0.874 - 0.874 - - - - - - - MORN repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-050522-267]
52. col5a3b ENSDARG00000101816 56 0.871 - 0.871 - - - - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
53. tmem168b ENSDARG00000062168 17 0.871 - 0.871 - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
54. ccdc41 ccdc41 97 0.871 - 0.871 - - - - - - -
55. mapk8a ENSDARG00000031888 44 0.871 0.871 - - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
56. drd2b ENSDARG00000011091, ENSDARG00000111351 130 0.87 - 0.870 - - - - - - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
57. slc16a12a ENSDARG00000017773 47 0.869 - 0.869 - - - - - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
58. capn3b ENSDARG00000043035, ENSDARG00000113539 229 0.868 - - - - 0.868 - - - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
59. lrrn3 lrrn3 137 0.868 0.868 - - - - - - - -
60. irx5a ENSDARG00000034043 1694 0.867 - 0.867 - - - - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
61. bicc1b ENSDARG00000070497 406 0.866 - 0.866 - - - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
62. CCDC142 ENSDARG00000101377 161 0.866 - 0.866 - - - - - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
63. dlgap3 ENSDARG00000055459 85 0.866 - 0.866 - - - - - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
64. CABZ01092943.1 CABZ01092943.1 29 0.865 - 0.865 - - - - - - -
65. CR318603.2 ENSDARG00000105536 199 0.865 - 0.865 - - - - - - -
66. zgc:66313 ENSDARG00000030357 45 0.865 - 0.865 - - - - - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
67. ENSDARG00000095340 ENSDARG00000095340 8 0.865 - 0.865 - - - - - - -
68. susd5 ENSDARG00000088277 439 0.863 - 0.863 - - - - - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
69. si:ch211-220f16.1 ENSDARG00000093977 4 0.862 - - - - 0.862 - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
70. galr1 galr1 9 0.862 - - - - 0.862 - - - -
71. BX000701.3 BX000701.3 4 0.862 - - - - 0.862 - - - -
72. kif13bb ENSDARG00000073859 7 0.862 - - - - 0.862 - - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
73. CR536621.1 CR536621.1 2 0.862 - - - - 0.862 - - - -
74. odf3l2 36 0.862 - - - - 0.862 - - - - outer dense fiber of sperm tails 3-like 2
75. BX511271.1 BX511271.1 22 0.862 - - - - 0.862 - - - -
76. BX323854.4 BX323854.4 3 0.862 - - - - 0.862 - - - -
77. si:ch211-152c8.4 ENSDARG00000101110 6 0.862 - - - - 0.862 - - - - si:ch211-152c8.4 [Source:ZFIN;Acc:ZDB-GENE-091204-235]
78. ENSDARG00000039608 ENSDARG00000039608 23 0.862 - - - - 0.862 - - - -
79. PACRG ENSDARG00000087556 7 0.862 - - - - 0.862 - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
80. BX927369.3 BX927369.3 5 0.862 - - - - 0.862 - - - -
81. FRMPD1 34 0.861 - - - - 0.861 - - - - FERM and PDZ domain containing 1, transcript variant X3
82. si:rp71-81e14.3 si:rp71-81e14.3 9 0.86 0.860 - - - - - - - -
83. lyn ENSDARG00000067916, ENSDARG00000107511 109 0.86 0.860 - - - - - - - - LYN proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040912-7]
84. dph2 ENSDARG00000078077 36 0.86 0.860 - - - - - - - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
85. BX664622.1 ENSDARG00000101754 39 0.86 0.860 - - - - - - - -
86. FMN1 ENSDARG00000011975 2 0.86 0.860 - - - - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
87. cnstb ENSDARG00000042759 105 0.86 0.860 - - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
88. CR854829.2 CR854829.2 11 0.86 - - - - 0.860 - - - -
89. AL935186.6 ENSDARG00000112275 5 0.86 0.860 - - - - - - - -
90. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 0.86 - 0.860 - - - - - - - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
91. GRIK3 ENSDARG00000077715 178 0.857 - - - - 0.857 - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
92. LMTK3 LMTK3 222 0.856 0.856 - - - - - - - -
93. si:dkeyp-80d11.1 ENSDARG00000101087 91 0.856 - 0.856 - - - - - - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
94. lypla1 ENSDARG00000104228 185 0.855 - 0.855 - - - - - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
95. DNLZ ENSDARG00000068655 229 0.855 - 0.855 - - - - - - - DNL-type zinc finger [Source:ZFIN;Acc:ZDB-GENE-070112-1482]
96. adra2b ENSDARG00000102096 121 0.855 - 0.855 - - - - - - - adrenoceptor alpha 2B [Source:ZFIN;Acc:ZDB-GENE-021010-2]
97. epdr1 ENSDARG00000045420 132 0.853 - 0.853 - - - - - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
98. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.853 - 0.853 - - - - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
99. tk2 ENSDARG00000046127, ENSDARG00000111531 204 0.852 - 0.852 - - - - - - - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
100. PEG3_35 PEG3_35 52 0.851 - 0.851 - - - - - - -

There are 650 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA