Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for me1

Gene Name Gene ID Reads Annotation
me1 ENSDARG00000053215 107 malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]










Genes with expression patterns similar to me1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. me1 ENSDARG00000053215 107 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
2. map3k8 ENSDARG00000061710 76 1.822 1.000 - 0.822 - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
3. pcdh2ab7 7 1.821 1.000 - - - 0.821 - - - - protocadherin 2 alpha b 7
4. BX470254.1_1 ENSDARG00000097402 50 1.805 1.000 - - - - 0.805 - - -
5. KCNN2 ENSDARG00000014939 25 1.791 0.983 - 0.808 - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
6. atxn1b ENSDARG00000060862 345 1.788 1.000 - - - - 0.788 - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
7. nmrk1 ENSDARG00000037913 18 1.76 1.000 - - - 0.760 - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
8. slc8a4a ENSDARG00000055154 90 1.741 0.946 - - - - 0.795 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
9. myoc ENSDARG00000021789 1631 1.701 0.941 - - - - 0.760 - - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
10. entpd3 ENSDARG00000035309 263 1.689 0.875 - - - - 0.814 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
11. uvrag ENSDARG00000023815 424 1.672 0.870 - - - - 0.802 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
12. CR936200.1 CR936200.1 327 1.664 0.876 - - - - 0.788 - - -
13. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.663 0.905 - - - - 0.758 - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
14. SLC36A4 ENSDARG00000039661 175 1.641 0.853 - - - - 0.788 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
15. TNS1 TNS1 628 1.636 - - - - - 0.791 0.845 - -
16. akap6 ENSDARG00000077295 1382 1.635 - - - - - 0.815 0.820 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
17. KLHL14 ENSDARG00000045275 155 1.613 0.773 - - - - 0.840 - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
18. SLC29A4 ENSDARG00000059690 470 1.612 0.829 - - - - 0.783 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
19. ALDH1L2 ENSDARG00000070230 2550 1.608 - - - - - 0.751 0.857 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
20. BX664721.5 BX664721.5 462 1.603 - - - - - 0.834 0.769 - -
21. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.599 0.801 - - - - 0.798 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
22. si:dkey-231k6.4 si:dkey-231k6.4 72 1.598 - - 0.778 - - 0.820 - - -
23. tapbp tapbp 70 1.585 - - 0.742 - - 0.843 - - -
24. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.582 - - 0.779 - - 0.803 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
25. FAM163A ENSDARG00000093021 86 1.578 - - 0.796 - - 0.782 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
26. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.573 - - - - - 0.732 0.841 - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
27. dync2i1 dync2i1 83 1.559 0.823 - 0.736 - - - - - -
28. pld3 ENSDARG00000068199 205 1.559 - - 0.731 - - 0.828 - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
29. b2m ENSDARG00000053136 215 1.558 - - 0.761 - - 0.797 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
30. zgc:174697 zgc:174697 128 1.557 0.729 - - - - 0.828 - - -
31. wu:fd44f01 wu:fd44f01 391 1.534 0.794 - - - - 0.740 - - -
32. orai2 ENSDARG00000035148 330 1.53 - - - - - 0.785 0.745 - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
33. si:dkey-22o22.2 ENSDARG00000102445 149 1.53 0.703 - - - - 0.827 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
34. GRIN2B GRIN2B 140 1.516 0.723 - - - - 0.793 - - -
35. espl1 ENSDARG00000075354 818 1.509 0.705 - - - - 0.804 - - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
36. SHISA8 SHISA8 58 1.505 - - 0.740 - - - 0.765 - -
37. cyp51 ENSDARG00000042641 458 1.494 0.754 - - - - 0.740 - - - cytochrome P450, family 51 [Source:ZFIN;Acc:ZDB-GENE-040625-2]
38. si:rp71-68n21.11 si:rp71-68n21.11 146 1.489 - - - - - 0.759 0.730 - -
39. lingo3a ENSDARG00000061970 234 1.482 - - - - - 0.726 0.756 - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
40. foxd1 ENSDARG00000029179 726 1.465 0.762 - - - - - 0.703 - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
41. CABZ01068274.1 CABZ01068274.1 193 1.465 0.723 - - - - 0.742 - - -
42. si:dkey-20l4.2 si:dkey-20l4.2 110 1.443 0.723 - 0.720 - - - - - -
43. RNase_MRP RNase_MRP 118 1.442 0.733 - - - 0.709 - - - -
44. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
45. msxa msxa 263 1 1.000 - - - - - - - -
46. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 1.000 - - - - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
47. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
48. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
49. prelp ENSDARG00000070597 99 1 1.000 - - - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
50. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
51. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
52. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
53. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
54. si:ch211-152l15.4 si:ch211-152l15.4 13 1 1.000 - - - - - - - -
55. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
56. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
57. si:dkey-72l14.7 si:dkey-72l14.7 3 1 1.000 - - - - - - - -
58. fbxo43 ENSDARG00000104186 40 1 1.000 - - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
59. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
60. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
61. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
62. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
63. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
64. DSEL DSEL 1 1 1.000 - - - - - - - -
65. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
66. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
67. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
68. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
69. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
70. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
71. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
72. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
73. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
74. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
75. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
76. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
77. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
78. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
79. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
80. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
81. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
82. ftr42 4 1 1.000 - - - - - - - - finTRIM family, member 42
83. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
84. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
85. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
86. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
87. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
88. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
89. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
90. elfn2 elfn2 1 1 1.000 - - - - - - - -
91. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
92. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
93. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
94. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
95. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
96. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
97. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
98. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
99. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
100. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -

There are 1594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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