Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mdn1

Gene Name Gene ID Reads Annotation
mdn1 ENSDARG00000008976 1403 midasin AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-138]










Genes with expression patterns similar to mdn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdn1 ENSDARG00000008976 1403 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 midasin AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-138]
2. dis3l2 ENSDARG00000033259 1509 1.489 - 0.702 - - - - 0.787 - - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
3. atp11a ENSDARG00000008413 742 1.463 - 0.711 - - - - 0.752 - - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
4. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 1.431 - 0.704 - - - - 0.727 - - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
5. mastl ENSDARG00000055566 1487 0.898 - 0.898 - - - - - - - microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
6. tmem11 ENSDARG00000070866 1319 0.895 - 0.895 - - - - - - - transmembrane protein 11 [Source:ZFIN;Acc:ZDB-GENE-050417-37]
7. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 0.887 - 0.887 - - - - - - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
8. MIB1 ENSDARG00000102184 3285 0.882 - 0.882 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
9. C10H11orf30 C10H11orf30 1982 0.879 - 0.879 - - - - - - -
10. tbl1x ENSDARG00000060438 1386 0.878 - - - - - - 0.878 - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
11. med6 ENSDARG00000034734 2711 0.871 - 0.871 - - - - - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
12. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.871 - 0.871 - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
13. gadd45g gadd45g 510 0.868 - - - - - - 0.868 - -
14. zgc:123105 ENSDARG00000003127 3061 0.863 - 0.863 - - - - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
15. PTP4A3 ENSDARG00000039997 3814 0.86 - 0.860 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
16. mrps34 ENSDARG00000057910 2007 0.857 - 0.857 - - - - - - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
17. trappc5 ENSDARG00000026068 1350 0.849 - - - - - - 0.849 - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
18. CCDC61 ENSDARG00000062307 582 0.848 - 0.848 - - - - - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
19. si:ch211-179l5.5 si:ch211-179l5.5 249 0.848 - 0.848 - - - - - - -
20. wrap53 ENSDARG00000086150 975 0.848 - 0.848 - - - - - - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
21. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.847 - 0.847 - - - - - - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
22. GPANK1 ENSDARG00000053995 1535 0.847 - 0.847 - - - - - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
23. lysmd3 ENSDARG00000024693 754 0.846 - 0.846 - - - - - - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
24. C24H17orf96 C24H17orf96 1538 0.844 - 0.844 - - - - - - -
25. znf592 ENSDARG00000060885 776 0.843 - - - - - - 0.843 - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
26. wdfy2 ENSDARG00000040453 406 0.841 - - - - - - 0.841 - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
27. ube3a ENSDARG00000055737 1874 0.841 - 0.841 - - - - - - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
28. BX005272.1 BX005272.1 553 0.84 - - - - - - 0.840 - -
29. tspan9a ENSDARG00000025299 676 0.84 - 0.840 - - - - - - - tetraspanin 9a [Source:ZFIN;Acc:ZDB-GENE-060503-632]
30. RUFY1 ENSDARG00000078685 114 0.839 - 0.839 - - - - - - - RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
31. wdr35 ENSDARG00000069269 492 0.836 - - - - - - 0.836 - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
32. alad ENSDARG00000100372 1711 0.835 - 0.835 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
33. hbae1_1 37308 0.832 - 0.832 - - - - - - - hemoglobin, alpha embryonic 1
34. brd7 ENSDARG00000008380 3654 0.83 - 0.830 - - - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
35. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.83 - 0.830 - - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
36. si:ch211-288g17.3 ENSDARG00000070959 2425 0.83 - 0.830 - - - - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
37. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.829 - - - - - - 0.829 - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
38. SIRT5 ENSDARG00000039684 1124 0.827 - - - 0.827 - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
39. uros ENSDARG00000027491 1147 0.827 - 0.827 - - - - - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
40. ppt2 ENSDARG00000104542 888 0.822 - - - - - - 0.822 - - palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
41. tada2a ENSDARG00000031562, ENSDARG00000115183 610 0.821 - 0.821 - - - - - - - transcriptional adaptor 2A [Source:ZFIN;Acc:ZDB-GENE-060929-508]
42. pigo ENSDARG00000011743 928 0.819 - 0.819 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
43. cables1 ENSDARG00000099395 361 0.819 - - - - - - 0.819 - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
44. mterfd3 mterfd3 1004 0.817 - 0.817 - - - - - - -
45. sephs1 ENSDARG00000058292 3347 0.817 - - - - - - 0.817 - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
46. kif14 ENSDARG00000062187, ENSDARG00000112389 653 0.816 - - - - - - 0.816 - - kinesin family member 14 [Source:ZFIN;Acc:ZDB-GENE-030131-5759]
47. rc3h1 rc3h1 1087 0.816 - - - - - - 0.816 - -
48. hbae1 14666 0.815 - 0.815 - - - - - - - hemoglobin, alpha embryonic 1
49. ck2b ck2b 781 0.814 - 0.814 - - - - - - -
50. rfesd ENSDARG00000058725 339 0.814 - 0.814 - - - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
51. mrps35 ENSDARG00000038456 1514 0.814 - 0.814 - - - - - - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
52. ift46 ENSDARG00000011240 2499 0.814 - 0.814 - - - - - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
53. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 0.812 - - - - - - 0.812 - - polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
54. mycn ENSDARG00000006837 1616 0.811 - 0.811 - - - - - - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
55. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 0.811 - 0.811 - - - - - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
56. smn1 ENSDARG00000018494 1024 0.811 - - - - - - 0.811 - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
57. tulp4 tulp4 1520 0.811 - 0.811 - - - - - - -
58. kif13ba ENSDARG00000079731 1726 0.81 - - - - - - 0.810 - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
59. ranbp9 ENSDARG00000061048 2687 0.81 - - - - - - 0.810 - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
60. spoplb ENSDARG00000003974 887 0.809 - 0.809 - - - - - - - speckle-type POZ protein-like b [Source:ZFIN;Acc:ZDB-GENE-061103-277]
61. bcas2 ENSDARG00000043631 1971 0.809 - 0.809 - - - - - - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
62. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 0.808 - 0.808 - - - - - - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
63. pld1a ENSDARG00000056228 765 0.807 - 0.807 - - - - - - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
64. slc40a1 ENSDARG00000000241 4882 0.806 - 0.806 - - - - - - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
65. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.806 - 0.806 - - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
66. slc19a2 ENSDARG00000059712 533 0.805 - 0.805 - - - - - - - solute carrier family 19 (thiamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-262]
67. sap30bp ENSDARG00000031261 1348 0.804 - - - - - - 0.804 - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
68. vgll4a ENSDARG00000094332 1410 0.804 - 0.804 - - - - - - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
69. hoxa9a ENSDARG00000105013 1509 0.803 - 0.803 - - - - - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
70. ppm1g ENSDARG00000075559 6516 0.802 - 0.802 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
71. efnb2a ENSDARG00000020164 5262 0.802 - 0.802 - - - - - - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
72. supt6h ENSDARG00000006524 3221 0.801 - 0.801 - - - - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
73. tmem248 ENSDARG00000018825 1560 0.8 - 0.800 - - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
74. sae1 ENSDARG00000010487 2028 0.8 - 0.800 - - - - - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
75. si:ch211-198j3.1 si:ch211-198j3.1 5487 0.799 - 0.799 - - - - - - -
76. hmbsb ENSDARG00000055991 3037 0.798 - 0.798 - - - - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
77. rab23 ENSDARG00000004151 1077 0.798 - 0.798 - - - - - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
78. ercc6 ENSDARG00000075612 1175 0.798 - 0.798 - - - - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
79. prmt1 ENSDARG00000010246 11311 0.797 - 0.797 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
80. tp53i11b ENSDARG00000006025 569 0.797 - - - - - - 0.797 - - tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
81. zhx3 ENSDARG00000019774 463 0.797 - 0.797 - - - - - - - zinc fingers and homeoboxes 3 [Source:ZFIN;Acc:ZDB-GENE-031107-1]
82. vps72 1164 0.796 - 0.796 - - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
83. smurf2 ENSDARG00000038067 2057 0.796 - 0.796 - - - - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
84. add2 ENSDARG00000074581 1402 0.795 - 0.795 - - - - - - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
85. rbpms2b ENSDARG00000079578 436 0.793 - 0.793 - - - - - - - RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
86. rreb1b ENSDARG00000042652 2731 0.793 - 0.793 - - - - - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
87. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 0.793 - 0.793 - - - - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
88. C25H12orf73 C25H12orf73 2031 0.793 - 0.793 - - - - - - -
89. CCRN4L CCRN4L 518 0.792 - 0.792 - - - - - - -
90. ppap2b ppap2b 2900 0.792 - 0.792 - - - - - - -
91. BX927290.1 BX927290.1 389 0.791 - - - - - - 0.791 - -
92. etfdh ENSDARG00000038834 1811 0.791 - 0.791 - - - - - - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
93. gng7 ENSDARG00000038693 540 0.791 - 0.791 - - - - - - - guanine nucleotide binding protein (G protein), gamma 7 [Source:ZFIN;Acc:ZDB-GENE-040718-93]
94. kdm2aa ENSDARG00000059653 2389 0.791 - 0.791 - - - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
95. tnpo3 ENSDARG00000045680 694 0.79 - 0.790 - - - - - - - transportin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-708]
96. ilk ENSDARG00000056964 6686 0.79 - 0.790 - - - - - - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
97. PTGIR ENSDARG00000038278 254 0.789 - 0.789 - - - - - - - prostaglandin I2 receptor [Source:ZFIN;Acc:ZDB-GENE-120511-1]
98. klhl18 ENSDARG00000004306 448 0.789 - - - - - - 0.789 - - kelch-like family member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5785]
99. phax ENSDARG00000044298 2302 0.789 - 0.789 - - - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
100. socs5a ENSDARG00000100717 6927 0.788 - 0.788 - - - - - - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]

There are 428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA