Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mdm4

Gene Name Gene ID Reads Annotation
mdm4 ENSDARG00000057513 1954 MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]










Genes with expression patterns similar to mdm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdm4 ENSDARG00000057513 1954 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
2. plcg1 ENSDARG00000038442 5324 2.461 - 0.748 0.881 - - - - 0.832 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
3. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 2.36 - 0.788 0.840 - - - - 0.732 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
4. sf3a3 ENSDARG00000100114 4511 2.321 - - - - - 0.767 0.712 0.842 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
5. bub1bb ENSDARG00000074927 1667 2.283 - 0.727 0.828 - - - - 0.728 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
6. cdkn2c ENSDARG00000057610 179 2.226 0.710 0.754 - - - 0.762 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
7. mxd3 ENSDARG00000098350 3040 2.215 - - 0.716 - - 0.770 - 0.729 - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
8. mrps25 ENSDARG00000041306 3654 1.701 - 0.874 0.827 - - - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
9. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.697 - - 0.818 - - - - - 0.879 tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
10. C3H16orf58 C3H16orf58 487 1.696 - - 0.886 - - 0.810 - - -
11. prkar1aa ENSDARG00000076128 6565 1.691 - - 0.863 - - 0.828 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
12. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.682 0.846 - - - - 0.836 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
13. znf292b ENSDARG00000043973 3791 1.682 - 0.909 - - - - - - 0.773 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
14. SCARF2 1117 1.67 - - 0.869 - - 0.801 - - - scavenger receptor class F, member 2
15. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.667 - - 0.857 - - 0.810 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
16. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.663 - - 0.846 - - 0.817 - - -
17. trpm7 ENSDARG00000036232 925 1.661 - - 0.870 - - 0.791 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
18. arhgap29b ENSDARG00000017748 812 1.661 - - 0.854 - - 0.807 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
19. lrrfip2 ENSDARG00000010400 2633 1.656 - 0.869 0.787 - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
20. pelo ENSDARG00000055477 1927 1.648 - - 0.901 - - - - 0.747 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
21. PPP1R8 PPP1R8 1897 1.646 - - 0.867 - - - - 0.779 -
22. psmd13 ENSDARG00000016239 4229 1.642 - - - - - - 0.800 - 0.842 proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
23. smim7 ENSDARG00000074848 1260 1.639 - 0.827 0.812 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
24. brd1b ENSDARG00000051798 1712 1.636 - 0.865 - - - 0.771 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
25. vps72 1164 1.636 - - 0.870 0.766 - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
26. me3 ENSDARG00000002305 3305 1.636 - - - - - 0.821 - 0.815 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
27. TRIP10 TRIP10 1079 1.634 - - 0.860 - - 0.774 - - -
28. lhfp 700 1.632 - 0.768 0.864 - - - - - - lipoma HMGIC fusion partner
29. GID4 ENSDARG00000079482 1375 1.632 - 0.828 0.804 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
30. rb1 ENSDARG00000006782 1445 1.631 - 0.803 - - - - - 0.828 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
31. pop5 ENSDARG00000053452 1347 1.63 - 0.814 - - - - - 0.816 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
32. smurf2 ENSDARG00000038067 2057 1.63 - - - - - 0.806 - 0.824 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
33. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.629 - - - - - 0.889 - 0.740 - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
34. CABZ01073174.1 CABZ01073174.1 581 1.625 - - 0.851 - - - - 0.774 -
35. fat3a ENSDARG00000033840 902 1.624 - - 0.858 - - - - 0.766 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
36. map3k7 ENSDARG00000020469 2845 1.62 - 0.730 0.890 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
37. tacc3 ENSDARG00000005454 2305 1.619 - - 0.785 - - 0.834 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
38. psat1 ENSDARG00000016733 8084 1.618 - 0.821 0.797 - - - - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
39. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.617 - 0.767 0.850 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
40. rfx2 ENSDARG00000013575 1275 1.616 - - - - - 0.796 - 0.820 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
41. CR942805.1 CR942805.1 94 1.612 - - 0.864 - - - - 0.748 -
42. kmt2e ENSDARG00000007523 1851 1.612 - 0.818 - - - 0.794 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
43. antxr1c ENSDARG00000063612 3203 1.609 - - 0.890 - - 0.719 - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
44. si:ch73-173m3.3 si:ch73-173m3.3 425 1.604 - - 0.864 - - 0.740 - - -
45. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.603 - - - - - 0.810 - 0.793 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
46. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 1.602 0.736 - 0.866 - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
47. mafk ENSDARG00000100947 1460 1.6 - - - - - 0.831 - 0.769 - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
48. laptm4a ENSDARG00000006397 1698 1.598 - 0.769 - - - 0.829 - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
49. psmb6 ENSDARG00000002240 8015 1.598 - 0.749 - - - 0.849 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
50. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.597 - - - - - 0.737 - - 0.860 post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
51. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.595 - - 0.802 - - 0.793 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
52. klf15 ENSDARG00000091127 1037 1.595 - 0.792 0.803 - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
53. lrp5 ENSDARG00000006921 3522 1.595 - - - - - 0.744 - - 0.851 low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
54. gstm gstm 4064 1.594 - - - - - 0.774 - 0.820 -
55. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.593 - - 0.823 - - 0.770 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
56. znrd1 ENSDARG00000036070 684 1.593 - 0.779 - - - - - 0.814 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
57. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.592 - 0.734 0.858 - - - - - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
58. WU:FC32F04 WU:FC32F04 2525 1.592 - - - - - 0.781 - - 0.811
59. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.591 - - - - - 0.714 - - 0.877 si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
60. IWS1 2428 1.589 - - 0.858 - - - - 0.731 - IWS1, SUPT6H interacting protein, transcript variant X2
61. zgc:136439 ENSDARG00000009267 720 1.588 - - 0.849 - - - - 0.739 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
62. CABZ01083862.1 ENSDARG00000106989 779 1.586 - - 0.851 0.735 - - - - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
63. adam10a ENSDARG00000053468 9308 1.585 - 0.803 - - - - - 0.782 - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
64. si:dkey-27i16.3 si:dkey-27i16.3 494 1.584 - 0.808 - - - 0.776 - - -
65. si:ch211-183d21.1 ENSDARG00000092499 1071 1.58 0.753 - - - - 0.827 - - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
66. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.578 - - 0.875 0.703 - - - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
67. med31 ENSDARG00000008020 4161 1.577 - - 0.825 - - 0.752 - - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
68. nrm ENSDARG00000063690 1371 1.575 - 0.777 - - - 0.798 - - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
69. gtf2f2a ENSDARG00000069910 1027 1.572 - 0.804 - - - 0.768 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
70. LLPH ENSDARG00000055360 1456 1.572 - 0.794 - - - - - 0.778 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
71. foxj1a ENSDARG00000101919 1095 1.571 - - 0.837 - - - - 0.734 - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
72. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.567 - - 0.834 - - - - 0.733 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
73. nufip2 ENSDARG00000069066 3965 1.564 - - 0.795 - - 0.769 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
74. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.561 - - 0.825 - - - - 0.736 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
75. safb ENSDARG00000020467 5608 1.56 - - - - - 0.785 - 0.775 - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
76. samd11 ENSDARG00000077852 631 1.56 - - - - - 0.793 - 0.767 - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
77. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.56 - - 0.795 - - 0.765 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
78. rnd3b ENSDARG00000007396 881 1.555 - 0.708 0.847 - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
79. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.552 - 0.764 - - - 0.788 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
80. chsy3 ENSDARG00000069472 271 1.55 - 0.795 - - - - - 0.755 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
81. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.549 - 0.766 - - - 0.783 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
82. ZNF628 1104 1.549 - 0.760 - - - - - 0.789 - zinc finger protein 628, transcript variant X3
83. ZNF576 ZNF576 1447 1.547 - - - - - 0.776 - 0.771 -
84. ARHGEF17 ENSDARG00000101644 625 1.545 - 0.702 0.843 - - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
85. anln ENSDARG00000060917 1432 1.542 0.733 - - - - - - 0.809 - anillin, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4486]
86. tbl1xr1b ENSDARG00000008966 2203 1.541 - - 0.776 0.765 - - - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
87. si:ch211-198b3.1 si:ch211-198b3.1 765 1.531 - 0.793 - - - 0.738 - - -
88. knop1 ENSDARG00000077721 2198 1.529 - - - - - 0.817 - 0.712 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
89. prdm10 ENSDARG00000104251 510 1.527 - 0.781 - 0.746 - - - - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
90. dcaf7 ENSDARG00000054355 3517 1.526 - 0.786 - - - - 0.740 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
91. pvrl1b 1645 1.526 - 0.715 - - - 0.811 - - - poliovirus receptor-related 1b
92. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.524 - - - - - 0.799 - 0.725 - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
93. PRRG1 ENSDARG00000043283 2779 1.523 - - - - - - 0.701 0.822 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
94. sae1 ENSDARG00000010487 2028 1.522 - - 0.740 - - - - 0.782 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
95. tgm1 ENSDARG00000017799 442 1.52 - 0.732 - - - 0.788 - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
96. slc25a42 ENSDARG00000099368 2420 1.52 - - 0.706 - - 0.814 - - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
97. tnpo2 ENSDARG00000038239 2469 1.519 - - 0.753 - - 0.766 - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
98. zgc:194839 ENSDARG00000078550 4003 1.517 - - 0.783 - - 0.734 - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
99. prc1b ENSDARG00000005993 780 1.515 - 0.756 - - - - - 0.759 - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
100. tab3 ENSDARG00000062063 525 1.515 - - - 0.707 - 0.808 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-408]

There are 1802 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA