Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mdm1

Gene Name Gene ID Reads Annotation
mdm1 ENSDARG00000045675 64 Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]










Genes with expression patterns similar to mdm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdm1 ENSDARG00000045675 64 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
2. CU694372.1 ENSDARG00000097988 105 1.985 - - - - 0.985 1.000 - - -
3. serpine3 ENSDARG00000057108 49 1.983 - - - - 0.983 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
4. BX548000.1 ENSDARG00000099044 45 1.976 - - - - 0.976 1.000 - - -
5. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.936 - - - - 0.936 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
6. CCSER1 ENSDARG00000075919 16 1.916 - - - - - 1.000 - 0.916 - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
7. mctp1b ENSDARG00000060871 20 1.906 - - - - - 1.000 - 0.906 - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
8. si:dkey-1d7.3 ENSDARG00000075837 18 1.878 1.000 - - - - 0.878 - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
9. CR846080.4 CR846080.4 6 1.825 - - 0.825 - - 1.000 - - -
10. MXRA5 MXRA5 58 1.795 - 0.834 - - 0.961 - - - -
11. si:ch1073-219n12.1 71 1.787 - 0.787 - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
12. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.778 - - - - - 1.000 - 0.778 - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
13. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1.752 0.752 - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
14. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1.752 0.752 - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
15. itga9 ENSDARG00000032435 35 1.75 0.812 - - - 0.938 - - - - integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
16. ANKRD13D ENSDARG00000098140 88 1.748 - - - - 0.977 0.771 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
17. gdf11 ENSDARG00000044924 534 1.72 - 1.000 - - - 0.720 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
18. cacnb2a ENSDARG00000099045 374 1.714 - - - - 0.979 0.735 - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
19. gpr88 24 1.713 - 0.713 - - - 1.000 - - - G protein-coupled receptor 88
20. vwc2 ENSDARG00000076495 22 1.713 - 0.713 - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
21. si:ch73-346o4.3 si:ch73-346o4.3 29 1.713 - 0.713 - - - 1.000 - - -
22. nitr3a_1 ENSDARG00000110676 44 1.713 - 0.713 - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
23. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.704 0.704 1.000 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
24. rapgef3 ENSDARG00000079291 69 1.69 - 0.794 - - 0.896 - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
25. parp3 ENSDARG00000003961 146 1.69 0.941 - - - - - - 0.749 - poly (ADP-ribose) polymerase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7435]
26. npsn ENSDARG00000010423 768 1.674 - 0.942 - - - - 0.732 - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
27. efcab2 ENSDARG00000074323 88 1.654 - - - - - 0.771 - 0.883 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
28. gpr39 ENSDARG00000102888 46 1.646 0.752 - - - - - - 0.894 - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
29. clic5b_1 ENSDARG00000070584 149 1.646 0.711 - - - 0.935 - - - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
30. spred3 ENSDARG00000040358 134 1.634 - 0.713 - - - 0.921 - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
31. znf142 ENSDARG00000061373 47 1.63 0.752 - - - - 0.878 - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
32. aftphb ENSDARG00000071347 161 1.629 - - - - 0.911 - 0.718 - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
33. SCARNA13 SCARNA13 122 1.624 - - - - 0.853 0.771 - - -
34. CR855996.2 ENSDARG00000104450 310 1.615 - - - - 0.854 - - - 0.761 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
35. si:ch73-103b9.2 ENSDARG00000092489 89 1.605 - 0.854 0.751 - - - - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
36. CU183952.1 CU183952.1 32 1.597 - - - - - - - 0.893 0.704
37. plekhg7 ENSDARG00000062855 308 1.596 - - - - 0.816 - - 0.780 - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
38. PIGB ENSDARG00000105011 277 1.584 - - - - 0.791 - - 0.793 - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
39. GALNT16 ENSDARG00000053190 250 1.583 - 0.809 - - - - - 0.774 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
40. pou5f3 ENSDARG00000044774 212 1.572 - - - - - - - 0.868 0.704 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
41. SBK3_1 SBK3_1 21 1.572 0.752 - 0.820 - - - - - -
42. LRP3 ENSDARG00000008485 1401 1.571 - 0.713 - - 0.858 - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
43. penka ENSDARG00000004869 161 1.564 - - - - 0.717 0.847 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
44. MRPL53 ENSDARG00000008920 147 1.559 - - - - - - 0.797 0.762 - mitochondrial ribosomal protein L53 [Source:ZFIN;Acc:ZDB-GENE-040912-93]
45. CU683898.1 CU683898.1 203 1.556 - - - - 0.712 - - 0.844 -
46. gpr22 gpr22 115 1.532 - 0.713 - - - 0.819 - - -
47. lmo2 ENSDARG00000095019 1098 1.488 0.779 - - - - - 0.709 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
48. grm2a ENSDARG00000004150 64 1.484 - 0.713 - - - 0.771 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
49. Mar-09 Mar-09 126 1.481 - 0.713 - - - 0.768 - - -
50. mpx ENSDARG00000019521 562 1.48 0.752 - - - - - 0.728 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
51. TUBB8P7 TUBB8P7 1353 1.474 - 0.722 - - 0.752 - - - -
52. SACS ENSDARG00000091042 15 1.471 - 0.713 0.758 - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
53. ME1 ENSDARG00000053215 8 1.465 0.752 0.713 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
54. si:ch73-290k24.5 ENSDARG00000076310 39 1.465 0.752 0.713 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
55. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1.459 - 0.713 0.746 - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
56. si:ch211-255a21.4 si:ch211-255a21.4 26 1.452 - 0.713 - - - - - - 0.739
57. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
58. lss ENSDARG00000061274 68 1 - 1.000 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
59. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
60. stk19 ENSDARG00000086628 85 1 - 1.000 - - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
61. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
62. TMEM136 TMEM136 13 1 - - - - - 1.000 - - -
63. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
64. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
65. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
66. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
67. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
68. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
69. rnf165a ENSDARG00000077906 133 1 - - - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
70. il4r il4r 75 1 1.000 - - - - - - - -
71. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
72. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
73. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
74. grapb ENSDARG00000022668 6 1 - - - - - 1.000 - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
75. syt12 ENSDARG00000101776 215 1 - 1.000 - - - - - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
76. CR788320.1 CR788320.1 1 1 - - - - - 1.000 - - -
77. olfcg9 ENSDARG00000105189 1 1 - - - - - 1.000 - - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
78. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
79. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
80. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
81. zgc:174573 ENSDARG00000079035 89 1 - 1.000 - - - - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
82. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
83. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
84. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
85. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
86. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - - - - - 1.000 - - -
87. zgc:113162 ENSDARG00000052923 62 1 - 1.000 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
88. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
89. mapkap1 ENSDARG00000091777 8 1 1.000 - - - - - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
90. trpa1b ENSDARG00000031875 39 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
91. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
92. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
93. cntnap5b ENSDARG00000075189 16 1 - 1.000 - - - - - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
94. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
95. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
96. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
97. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
98. INTS4 ENSDARG00000102953 38 1 - 1.000 - - - - - - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
99. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
100. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -

There are 1359 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA