Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mdka

Gene Name Gene ID Reads Annotation
mdka ENSDARG00000036036 23084 midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]










Genes with expression patterns similar to mdka

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdka ENSDARG00000036036 23084 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
2. ywhaba ENSDARG00000013078 42000 2.475 0.827 - - - - 0.913 - - 0.735 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
3. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 2.296 0.747 - 0.740 - - - 0.809 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
4. eif4g2b ENSDARG00000057167 22982 2.229 - - - - 0.731 0.739 - - 0.759 eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
5. anxa1b ENSDARG00000100095 7763 1.602 - 0.761 - - - 0.841 - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
6. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.572 - 0.839 0.733 - - - - - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
7. capn9 ENSDARG00000012341 12911 1.571 - - - - - 0.816 0.755 - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
8. arhgdig ENSDARG00000004034 10368 1.557 - 0.806 - - - - - - 0.751 Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
9. banf1 ENSDARG00000037009 16466 1.546 - - - - 0.735 - 0.811 - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
10. arl1 ENSDARG00000101680 5973 1.545 - 0.831 - - - 0.714 - - - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
11. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.542 - 0.824 0.718 - - - - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
12. tbl1xr1a ENSDARG00000058696 5439 1.536 - 0.715 0.821 - - - - - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
13. si:ch211-161h7.4 ENSDARG00000087238 4399 1.519 - 0.787 - 0.732 - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
14. itgb1b.1 ENSDARG00000053232 4721 1.475 - 0.745 0.730 - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
15. dsg2 dsg2 4039 1.475 - 0.772 - - - 0.703 - - -
16. si:dkey-193c22.2 ENSDARG00000076735 2791 1.469 - 0.725 0.744 - - - - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
17. zgc:101000 zgc:101000 9041 1.464 - 0.745 - - - 0.719 - - -
18. AL954137.2 ENSDARG00000114408 104506 1.463 0.736 - - - - 0.727 - - -
19. lamb1a ENSDARG00000101209 5396 1.462 - 0.747 - - - - - - 0.715 laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
20. neu1 ENSDARG00000008832 2848 1.458 - 0.741 0.717 - - - - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
21. fkbp9 ENSDARG00000005023 17518 1.458 - 0.739 - - - - - - 0.719 FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
22. hectd1 ENSDARG00000054213 3501 1.45 - 0.717 0.733 - - - - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
23. sec23a ENSDARG00000104230 3910 1.435 - 0.729 0.706 - - - - - - Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
24. sp8b ENSDARG00000056666 3988 1.435 - 0.731 - - - - 0.704 - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
25. umps ENSDARG00000012215 4564 1.409 0.701 0.708 - - - - - - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
26. arpc2 ENSDARG00000075989 22423 1.404 0.702 0.702 - - - - - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
27. pepd ENSDARG00000102249 2644 0.893 - 0.893 - - - - - - - peptidase D [Source:ZFIN;Acc:ZDB-GENE-030131-9444]
28. col14a1a ENSDARG00000005762 4778 0.881 - 0.881 - - - - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
29. myh9a ENSDARG00000063295 27935 0.868 - 0.868 - - - - - - - myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
30. tmem258 ENSDARG00000078785 9578 0.865 - 0.865 - - - - - - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
31. zgc:85975 4738 0.855 - 0.855 - - - - - - - zgc:85975
32. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.847 - 0.847 - - - - - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
33. ywhag1 ENSDARG00000067626 3786 0.844 - 0.844 - - - - - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011115-1]
34. cnih4 ENSDARG00000087759 3937 0.832 - 0.832 - - - - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
35. NID2 NID2 5282 0.832 - 0.832 - - - - - - -
36. ost4 ENSDARG00000096118 7679 0.83 - 0.830 - - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
37. rasd1 ENSDARG00000019274 1898 0.83 - 0.830 - - - - - - - RAS, dexamethasone-induced 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1473]
38. tmem214 ENSDARG00000016968 3772 0.829 - 0.829 - - - - - - - transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
39. sec23b ENSDARG00000019360 6210 0.824 - - - - - 0.824 - - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
40. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 0.823 - 0.823 - - - - - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
41. vps29 ENSDARG00000069521 5599 0.82 - - 0.820 - - - - - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
42. arl4ca ENSDARG00000057606 4686 0.819 - 0.819 - - - - - - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
43. chmp4b chmp4b 5318 0.819 - - - - - 0.819 - - -
44. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 0.818 - 0.818 - - - - - - - stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
45. tmem110l ENSDARG00000045518 1783 0.818 - 0.818 - - - - - - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
46. reep3 reep3 2536 0.816 - 0.816 - - - - - - -
47. ppib ENSDARG00000092798 21969 0.815 - 0.815 - - - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
48. cad ENSDARG00000041895 4977 0.815 - 0.815 - - - - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
49. psmb6 ENSDARG00000002240 8015 0.814 - - 0.814 - - - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
50. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 0.814 - 0.814 - - - - - - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
51. f2 ENSDARG00000036041 3129 0.814 - 0.814 - - - - - - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
52. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 0.812 - - 0.812 - - - - - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
53. sf3b1 ENSDARG00000056138 5785 0.81 - - 0.810 - - - - - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
54. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 0.81 - 0.810 - - - - - - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
55. rbms3 ENSDARG00000044574 2514 0.81 - - 0.810 - - - - - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
56. tlk1a ENSDARG00000042467 2339 0.809 - - 0.809 - - - - - - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
57. mtp_1 3298 0.803 - 0.803 - - - - - - - microsomal triglyceride transfer protein
58. stam2 ENSDARG00000005318 2980 0.803 - 0.803 - - - - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
59. atic ENSDARG00000016706 6032 0.803 - 0.803 - - - - - - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
60. hsd17b12a ENSDARG00000015709 2499 0.8 - 0.800 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
61. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.799 - - 0.799 - - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
62. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 0.799 - 0.799 - - - - - - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
63. llgl2 ENSDARG00000023920 2617 0.796 - 0.796 - - - - - - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
64. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.795 - - - - - 0.795 - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
65. snx7 ENSDARG00000105185 2977 0.794 - 0.794 - - - - - - - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
66. hrsp12 3981 0.793 - 0.793 - - - - - - - heat-responsive protein 12, transcript variant 1
67. taldo1 ENSDARG00000103369 3804 0.793 - 0.793 - - - - - - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
68. MIA ENSDARG00000052437, ENSDARG00000116215 1220 0.792 - 0.792 - - - - - - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
69. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 0.792 - 0.792 - - - - - - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
70. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 0.791 - 0.791 - - - - - - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
71. fam60al 2846 0.791 - 0.791 - - - - - - - family with sequence similarity 60, member A, like
72. surf4l ENSDARG00000035131 3648 0.79 - 0.790 - - - - - - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
73. slmo2 slmo2 5559 0.789 - 0.789 - - - - - - -
74. mcl1b ENSDARG00000008363 3097 0.786 - 0.786 - - - - - - - MCL1, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-030825-1]
75. CD68 CD68 4599 0.786 - 0.786 - - - - - - -
76. AP2A1 ENSDARG00000054320 5591 0.786 - - - - - 0.786 - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
77. gng5 ENSDARG00000039830 12102 0.786 - - - - - - - - 0.786 guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
78. bzw1b ENSDARG00000099148 2972 0.785 - 0.785 - - - - - - - basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
79. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 0.784 - 0.784 - - - - - - - kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
80. poc1bl ENSDARG00000012745 2451 0.784 - 0.784 - - - - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
81. zgc:153258 zgc:153258 868 0.784 - 0.784 - - - - - - -
82. pck1 ENSDARG00000013522 1657 0.784 - 0.784 - - - - - - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
83. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 0.784 - 0.784 - - - - - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
84. cebpb ENSDARG00000042725 3921 0.783 - 0.783 - - - - - - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
85. anln ENSDARG00000060917 1432 0.783 - 0.783 - - - - - - - anillin, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4486]
86. zgc:77439 ENSDARG00000039211 1492 0.782 - 0.782 - - - - - - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
87. ywhaz ENSDARG00000032575 15257 0.781 - - - - - 0.781 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
88. triqk ENSDARG00000076296 1274 0.78 - 0.780 - - - - - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
89. ywhaqb ENSDARG00000023323 28138 0.779 0.779 - - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
90. atp1a1a.1 ENSDARG00000002791 7392 0.778 - 0.778 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
91. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 0.778 - 0.778 - - - - - - - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
92. si:ch211-166a6.5 ENSDARG00000079745 11111 0.777 - 0.777 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
93. hmgn2 ENSDARG00000099572 110168 0.777 0.777 - - - - - - - - high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
94. gstp1 ENSDARG00000104068 12698 0.776 - 0.776 - - - - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
95. cdh1 ENSDARG00000102750 8654 0.775 - 0.775 - - - - - - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
96. rpl22l1 ENSDARG00000010244 36262 0.775 - - 0.775 - - - - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
97. eif3s10 ENSDARG00000076815 10822 0.774 - - 0.774 - - - - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
98. CABZ01079427.1 CABZ01079427.1 1682 0.774 - - - - - 0.774 - - -
99. hsp70l ENSDARG00000055723 355 0.773 - 0.773 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
100. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.773 - 0.773 - - - - - - - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]

There are 335 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA