Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mdh1b

Gene Name Gene ID Reads Annotation
mdh1b ENSDARG00000018008 3196 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]










Genes with expression patterns similar to mdh1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdh1b ENSDARG00000018008 3196 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
2. tnnt3a ENSDARG00000030270 112506 5.512 0.819 - 0.760 0.766 0.736 0.727 0.810 - 0.894 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
3. txlnbb ENSDARG00000076241 6396 4.888 0.879 0.724 0.718 - - 0.859 0.953 - 0.755 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. prx ENSDARG00000017246 6183 4.836 0.852 0.730 0.737 0.752 - - 0.963 - 0.802 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
5. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.794 0.787 - - 0.752 0.738 0.728 0.940 - 0.849 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
6. NRAP ENSDARG00000009341 3565 4.753 0.849 0.702 0.748 0.794 - 0.707 0.953 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
7. trdn ENSDARG00000041779 4283 4.715 0.787 - 0.757 - 0.710 0.802 0.930 - 0.729 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
8. fitm1 ENSDARG00000056464 1759 4.672 0.719 0.726 0.780 - 0.785 0.733 0.929 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
9. mylz3 ENSDARG00000017441 303597 4.647 0.805 - 0.810 0.745 - 0.747 0.746 - 0.794 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
10. ckmb ENSDARG00000040565 505935 4.514 0.763 - 0.807 0.776 0.700 0.756 - - 0.712 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
11. nexn ENSDARG00000057317 10972 4.182 0.826 - 0.753 - - 0.804 0.961 - 0.838 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
12. ryr3 ENSDARG00000071331 6795 4.17 0.847 0.789 - - - 0.808 0.944 - 0.782 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
13. srl ENSDARG00000104587 11126 4.137 0.909 0.772 0.794 0.706 - - 0.956 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
14. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.136 0.779 - 0.842 - 0.709 - 0.989 - 0.817 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
15. chrna1 ENSDARG00000009021 2931 4.104 0.751 0.779 0.840 - - 0.779 0.955 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
16. mybpc2b ENSDARG00000021265 9618 4.089 0.847 0.743 - 0.738 - - 0.897 - 0.864 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
17. rp42-pen rp42-pen 3395 4.084 - 0.741 0.729 - - 0.861 0.943 - 0.810
18. myoz2a ENSDARG00000012311 1373 4.082 0.790 0.748 - - - 0.876 0.936 - 0.732 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
19. mafa ENSDARG00000015890 2140 4.041 0.799 0.845 - - - 0.738 0.909 - 0.750 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
20. ITGB1BP2 ENSDARG00000030176 2472 4.04 0.834 0.708 - - - - 0.916 0.818 0.764 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
21. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.027 0.809 0.720 - 0.719 - - 0.950 - 0.829 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
22. cap2 ENSDARG00000104478 3266 4.025 0.834 0.735 0.707 - - - 0.947 - 0.802 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
23. ryr1b ENSDARG00000023797 5693 4.023 - 0.739 0.780 - 0.728 - 0.958 - 0.818 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
24. pygma ENSDARG00000055518 15972 3.974 0.869 0.717 - - 0.703 - 0.937 - 0.748 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
25. pbxip1a ENSDARG00000071015 4960 3.957 0.819 0.705 0.764 - - - 0.943 - 0.726 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
26. atp2a1 ENSDARG00000020574 291561 3.938 0.849 - 0.781 0.758 - - 0.762 - 0.788 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
27. smyd2b ENSDARG00000005629 8181 3.916 0.842 0.723 - - 0.717 0.821 - - 0.813 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
28. tpma ENSDARG00000033683 752432 3.904 0.841 - 0.789 0.734 - - 0.827 - 0.713 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
29. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.86 0.793 - 0.812 0.717 - 0.733 - - 0.805 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
30. cfl2 ENSDARG00000014106 8051 3.813 0.733 0.742 0.798 0.708 - - 0.832 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
31. PTPLA PTPLA 4044 3.397 0.771 - - - - 0.851 0.966 - 0.809
32. BX294434.1 ENSDARG00000061272 6493 3.392 0.827 0.762 - - - - 0.978 - 0.825 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
33. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.384 0.882 - 0.768 - - 0.810 0.924 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
34. hhatla ENSDARG00000039051 6598 3.381 0.869 - 0.701 - - - 0.968 - 0.843 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
35. zgc:92518 ENSDARG00000016343 3837 3.365 0.884 - - 0.727 - 0.762 0.992 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
36. klhl41b ENSDARG00000006757 10762 3.36 0.829 - 0.762 - - - 0.985 - 0.784 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
37. tnnt2d ENSDARG00000002988 7590 3.329 0.787 - - - - 0.720 0.911 - 0.911 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
38. myom1a ENSDARG00000061249 10230 3.325 - - 0.815 - - 0.708 0.977 - 0.825 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
39. CR354540.2 ENSDARG00000117517 18452 3.324 0.775 - - - 0.809 - 0.949 - 0.791
40. jph2 ENSDARG00000028625 6706 3.318 0.815 - - 0.721 - - 0.963 - 0.819 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
41. si:ch211-156j16.1 ENSDARG00000092035 7441 3.309 0.798 - 0.745 - - - 0.970 - 0.796 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
42. TMPO TMPO 3264 3.308 0.802 0.771 0.775 - - - 0.960 - -
43. tgm2a ENSDARG00000070157 4516 3.306 0.843 - 0.729 - - - 0.932 - 0.802 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
44. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.305 0.862 - - - - 0.753 0.935 - 0.755 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
45. mybphb ENSDARG00000003081 5208 3.304 - 0.741 - - 0.771 - 0.940 - 0.852 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
46. SYNPO2L SYNPO2L 6697 3.304 0.854 - 0.750 - - 0.836 - - 0.864
47. ntmt1 ENSDARG00000022399 5779 3.302 0.809 0.764 - - - 0.809 0.920 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
48. adss ENSDARG00000002071 5497 3.302 0.837 - 0.778 - 0.714 - 0.973 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
49. txnipb ENSDARG00000070000 2365 3.3 0.748 - - - - 0.913 0.904 - 0.735 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
50. ank1 ank1 5209 3.289 0.820 0.923 0.721 - - - - - 0.825
51. casq1b ENSDARG00000018105 2643 3.282 0.809 - - 0.720 - - 0.969 - 0.784 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
52. tmem161a ENSDARG00000012790 16094 3.279 0.885 - 0.797 - - - 0.744 - 0.853 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
53. trim63 trim63 2437 3.252 0.806 - 0.702 - - 0.821 0.923 - -
54. znf648 ENSDARG00000104823 1918 3.251 0.754 - - - - 0.903 0.887 - 0.707 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
55. klhl40a ENSDARG00000039052 2537 3.248 0.816 0.709 - - - 0.773 0.950 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
56. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.245 0.805 - 0.768 0.707 - - 0.965 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
57. C13H10orf71 3489 3.243 0.819 0.758 - - - - 0.931 - 0.735 chromosome 13 C10orf71 homolog
58. vcl vcl 6667 3.23 0.838 0.769 0.839 - - - - - 0.784
59. SPEG SPEG 4017 3.218 0.796 - 0.792 - - - 0.929 - 0.701
60. tnnc1b ENSDARG00000037539 13945 3.215 - 0.775 0.750 - - 0.760 0.930 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
61. CU633479.5 ENSDARG00000114818 1815 3.214 0.731 0.726 - - - 0.825 0.932 - -
62. EHBP1L1 EHBP1L1 2500 3.209 0.800 0.711 - - - 0.735 0.963 - -
63. BX324201.1 BX324201.1 3302 3.209 0.788 - 0.750 - - - 0.948 - 0.723
64. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.204 0.857 0.750 - 0.752 - - - - 0.845 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
65. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 3.2 - - - - - 0.782 0.924 0.765 0.729 sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
66. klhl31 ENSDARG00000039066 13656 3.2 - - 0.845 - 0.706 - 0.801 - 0.848 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
67. MYOM1 MYOM1 3870 3.193 0.774 - 0.711 - - - 0.939 - 0.769
68. COL22A1 COL22A1 4473 3.193 0.769 0.729 0.723 - - - 0.972 - -
69. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.192 0.824 0.726 - 0.700 - - 0.942 - -
70. ahsa1 ahsa1 2012 3.184 - - 0.732 - - 0.808 0.919 - 0.725
71. sptb ENSDARG00000030490 7128 3.173 0.795 0.705 - - - 0.707 0.966 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
72. usp2a ENSDARG00000020107 2586 3.17 0.728 - - - - 0.791 0.945 - 0.706 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
73. BX530018.3 ENSDARG00000107022 614 3.154 0.787 - - - - 0.717 0.912 - 0.738
74. jph1a ENSDARG00000058603 2852 3.148 - - - 0.764 - 0.702 0.949 - 0.733 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
75. atp1b3b ENSDARG00000042837 5163 3.136 0.807 - - - - 0.734 0.880 - 0.715 ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
76. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.123 0.804 0.712 - - - 0.803 - - 0.804 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
77. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 3.119 0.823 - 0.781 - 0.730 0.785 - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
78. cmya5 ENSDARG00000061379 1423 3.119 0.759 0.709 - - - - 0.937 - 0.714 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
79. sucla2 ENSDARG00000005359 5992 3.116 - 0.831 0.786 - - 0.761 - - 0.738 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
80. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 3.109 0.762 - 0.798 - - - 0.826 - 0.723 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
81. trim55a ENSDARG00000029596 2858 3.1 0.749 - - 0.710 - - 0.928 - 0.713 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
82. acsl1 acsl1 4216 3.098 0.784 - - 0.729 - - 0.884 - 0.701
83. SYNPO2 SYNPO2 7382 3.08 - - 0.776 - - 0.765 0.722 - 0.817
84. trim101 ENSDARG00000018264 827 3.069 0.710 - 0.724 - - 0.750 0.885 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
85. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.025 - - 0.775 0.704 - 0.741 - - 0.805 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
86. mef2d ENSDARG00000040237 6144 3 0.711 0.841 - - - 0.704 0.744 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
87. mylpfb ENSDARG00000002589 70167 2.992 - 0.746 0.702 0.769 0.775 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
88. ttnb ttnb 73721 2.964 - - 0.743 0.757 - 0.741 - - 0.723
89. sdhdb ENSDARG00000030139 9761 2.952 0.718 - - - - 0.791 0.733 - 0.710 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
90. apobec2a ENSDARG00000018881 4790 2.916 0.736 0.748 - 0.713 - - - - 0.719 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
91. ptrfa ptrfa 4363 2.832 0.716 0.703 - - - - - 0.701 0.712
92. murcb murcb 13655 2.636 0.849 - - 0.815 - - 0.972 - -
93. CR847973.1 ENSDARG00000115516 8754 2.629 0.887 - - - - - 0.911 - 0.831
94. rtn2a ENSDARG00000016088 12184 2.607 0.892 - 0.741 - - - 0.974 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
95. sh3bgr ENSDARG00000021633 3498 2.591 0.785 - - - - 0.838 0.968 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
96. sar1ab ENSDARG00000033320 3984 2.589 0.846 - - - 0.759 - 0.984 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
97. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.584 - - - - - 0.870 0.902 - 0.812 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
98. pvalb4 ENSDARG00000024433 35736 2.584 0.858 - - - 0.798 - 0.928 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
99. usp28 ENSDARG00000008880 1850 2.573 0.816 - - - 0.818 - 0.939 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
100. TRIM63 TRIM63 1600 2.567 0.747 - - - - 0.859 0.961 - -

There are 1390 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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