Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mcm9

Gene Name Gene ID Reads Annotation
mcm9 ENSDARG00000013528 212 minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]










Genes with expression patterns similar to mcm9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mcm9 ENSDARG00000013528 212 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
2. crim1 ENSDARG00000029668 118 1.83 - 0.899 - - - - 0.931 - - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
3. fgf17 ENSDARG00000102778 136 1.761 0.884 - - - - 0.877 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
4. KCNS1 KCNS1 24 1.732 - - - - - 0.934 0.798 - -
5. lyrm5b ENSDARG00000045827 91 1.722 0.863 0.859 - - - - - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
6. pknox2 ENSDARG00000055349 784 1.68 - - - - - 0.933 0.747 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
7. si:ch1073-280h16.1 si:ch1073-280h16.1 229 1.677 - 0.906 - - - 0.771 - - -
8. si:dkey-23a23.3 ENSDARG00000088214 86 1.657 - - - - - 0.878 0.779 - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
9. si:dkey-100n10.2 101 1.643 - - - - - 0.865 0.778 - - si:dkey-100n10.2
10. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.634 - - - - - 0.912 - 0.722 - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
11. dcdc2b ENSDARG00000053744 181 1.631 - - - - - 0.908 0.723 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
12. C8H1orf194 C8H1orf194 111 1.63 - - - - - 0.907 0.723 - -
13. TESK1 TESK1 109 1.613 - - - - - 0.890 0.723 - -
14. iah1 ENSDARG00000015765 326 1.611 - 0.731 - - - 0.880 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
15. scin ENSDARG00000010728, ENSDARG00000111092 437 1.6 - - - - - 0.771 0.829 - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
16. ift52 ENSDARG00000045025 606 1.576 - - - - - 0.832 0.744 - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
17. AL929204.1 AL929204.1 773 1.567 - - - - - 0.849 0.718 - -
18. alad ENSDARG00000100372 1711 1.558 - 0.718 - - - 0.840 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
19. mxra7 ENSDARG00000095300 332 1.526 - - - - - 0.819 0.707 - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
20. PLEKHM3 ENSDARG00000030633 496 1.52 - - - - - 0.799 0.721 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
21. kcnn1b ENSDARG00000023546 152 1.514 - - - - - 0.793 - 0.721 - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
22. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 0.964 - - - - - 0.964 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
23. si:dkey-258p11.2 si:dkey-258p11.2 171 0.961 - - - - - 0.961 - - -
24. dbpa ENSDARG00000063014 107 0.96 - - - - - 0.960 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
25. lrrfip1b ENSDARG00000095170 293 0.96 - - - - - 0.960 - - - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
26. pycr1 pycr1 1258 0.958 - - - - - 0.958 - - -
27. KIF21A_1 KIF21A_1 237 0.954 - - - - - 0.954 - - -
28. BX649494.1 BX649494.1 195 0.954 - - - - - 0.954 - - -
29. FIBCD1 ENSDARG00000074640 56 0.951 - - - - - 0.951 - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
30. si:dkey-51d8.11 8 0.948 - - - - - 0.948 - - - si:dkey-51d8.11, transcript variant X6
31. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 0.948 - - - - - 0.948 - - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
32. BX004890.2 BX004890.2 84 0.948 - - - - - 0.948 - - -
33. elk1 ENSDARG00000078066 414 0.947 - - - - - 0.947 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
34. gpr155b ENSDARG00000071086 54 0.947 - - - - - 0.947 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
35. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 0.946 - - - - - 0.946 - - -
36. si:ch211-163b2.4 ENSDARG00000094890 140 0.945 - - - - - 0.945 - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
37. zbtb48 ENSDARG00000039263 251 0.942 - - - - - 0.942 - - - zinc finger and BTB domain containing 48 [Source:ZFIN;Acc:ZDB-GENE-030131-4450]
38. si:dkey-14o1.14 si:dkey-14o1.14 142 0.941 - - - - - 0.941 - - -
39. abhd14a ENSDARG00000058367 546 0.941 - - - - - 0.941 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
40. fgfrl1b ENSDARG00000052556, ENSDARG00000110034 240 0.94 - - - - - 0.940 - - - fibroblast growth factor receptor like 1b [Source:ZFIN;Acc:ZDB-GENE-050201-3]
41. slc25a21 ENSDARG00000060564 344 0.94 - - - - - 0.940 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
42. parp6a ENSDARG00000042703 112 0.94 - - - - - 0.940 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
43. flrt3 ENSDARG00000076895 3516 0.939 - - - - - 0.939 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
44. AVL9 ENSDARG00000055538 329 0.939 - - - - - 0.939 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
45. CU463790.1 CU463790.1 60 0.939 - - - - - 0.939 - - -
46. znf532 ENSDARG00000052894 118 0.938 0.938 - - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
47. si:dkey-256h2.1 ENSDARG00000021849 38 0.937 - - - - - 0.937 - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
48. FAM126B 588 0.937 - - - - - 0.937 - - - family with sequence similarity 126 member B
49. C5H3orf30 C5H3orf30 63 0.936 - - - - - 0.936 - - -
50. PARM1 ENSDARG00000114063 58 0.935 - - - - - 0.935 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
51. mipep ENSDARG00000055344 63 0.935 - - - - - 0.935 - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
52. si:dkey-180p18.9 381 0.935 - - - - - 0.935 - - - si:dkey-180p18.9
53. RAC1_2 RAC1_2 51 0.935 - - - - - 0.935 - - -
54. pstpip1a ENSDARG00000060860 23 0.935 - - - - - 0.935 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
55. zgc:113294 ENSDARG00000032285 132 0.935 - - - - - 0.935 - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
56. si:dkey-10f21.16 si:dkey-10f21.16 252 0.935 - - - - - 0.935 - - -
57. ripk2 ENSDARG00000104290 71 0.934 - - - - - 0.934 - - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
58. si:dkey-163m14.10 si:dkey-163m14.10 33 0.934 - - - - - 0.934 - - -
59. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.933 - - - - - 0.933 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
60. XKR7 ENSDARG00000026333 175 0.932 - - - - - 0.932 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
61. si:dkey-45d16.4 72 0.932 - - - - - 0.932 - - - si:dkey-45d16.4
62. si:dkey-81p22.11 ENSDARG00000093797 68 0.932 - - - - - 0.932 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
63. bcat1 ENSDARG00000045568 39 0.931 - - - - - - 0.931 - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
64. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.93 - - - - - 0.930 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
65. MON2 ENSDARG00000099798 2359 0.93 - - - - - 0.930 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
66. CCDC142 ENSDARG00000101377 161 0.93 - - - - - 0.930 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
67. GPC6 GPC6 4 0.93 - - - - - 0.930 - - -
68. cenpk ENSDARG00000039616 744 0.93 - - - - - 0.930 - - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
69. entpd2b ENSDARG00000044795 7 0.929 - - - - - 0.929 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
70. RAPH1 RAPH1 294 0.929 - - - - - 0.929 - - -
71. SB:CB827 SB:CB827 245 0.929 - - - - - 0.929 - - -
72. si:ch211-223f7.1 si:ch211-223f7.1 38 0.928 - - - - - 0.928 - - -
73. uros ENSDARG00000027491 1147 0.928 - - - - - 0.928 - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
74. CABZ01044814.2 CABZ01044814.2 25711 0.928 - - - - - 0.928 - - -
75. CAMK1 CAMK1 28 0.928 - - - - - 0.928 - - -
76. CT955963.1 ENSDARG00000100370 23 0.928 - - - - - 0.928 - - -
77. BX470131.1 BX470131.1 86 0.928 - - - - - 0.928 - - -
78. sgms2 57 0.928 - - - - - 0.928 - - - sphingomyelin synthase 2, transcript variant X1
79. CT030712.1 ENSDARG00000044355 83 0.927 - - - - - 0.927 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
80. SNORA57 SNORA57 148 0.927 - - - - - 0.927 - - -
81. NPFFR1 ENSDARG00000111997 29 0.927 - - - - - 0.927 - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
82. ADORA1 ADORA1 8 0.927 - - - - - 0.927 - - -
83. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 0.927 - - - - - 0.927 - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
84. CNTNAP1 ENSDARG00000074524 73 0.926 - - - - - 0.926 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
85. rnd1 rnd1 1086 0.926 - - - - - 0.926 - - -
86. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 0.926 - - - - - 0.926 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
87. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 0.926 - - - - - 0.926 - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
88. hsp70l_1 ENSDARG00000055723 72 0.925 - - - - - 0.925 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
89. CR407547.1 ENSDARG00000117572 41 0.925 - - - - - 0.925 - - -
90. rab14_1 ENSDARG00000074246 481 0.925 - - - - - 0.925 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
91. fignl1 ENSDARG00000016427 636 0.925 - - - - - 0.925 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
92. tmem5 1630 0.924 - - - - - 0.924 - - - transmembrane protein 5
93. GRIN2B GRIN2B 140 0.924 - - - - - 0.924 - - -
94. pcdh2g6 9 0.923 - - - - - 0.923 - - - protocadherin 2 gamma 6
95. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.923 - - - - - 0.923 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
96. kctd1 ENSDARG00000074056 652 0.923 - - - - - 0.923 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
97. scpp5 ENSDARG00000078622 15 0.923 - - - - - 0.923 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
98. PFKFB1 ENSDARG00000037140 5 0.923 - - - - - 0.923 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
99. slc35a5 ENSDARG00000000001 17 0.923 - - - - - 0.923 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
100. zgc:154142 ENSDARG00000100792 42 0.923 - - - - - 0.923 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]

There are 1316 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA