Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mcm5_1

Gene Name Gene ID Reads Annotation
mcm5_1 ENSDARG00000019507 10 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]










Genes with expression patterns similar to mcm5_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mcm5_1 ENSDARG00000019507 10 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
2. hcrt ENSDARG00000070932 4 2.941 1.000 - - 1.000 - - - - 0.941 hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
3. EXD1 ENSDARG00000098669 27 2.941 - 0.941 - 1.000 - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
4. pclob ENSDARG00000098880 60 2.736 - - - 0.907 0.829 - 1.000 - - piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]
5. dnase1l3l dnase1l3l 16 2.682 - - - - - 1.000 - 0.705 0.977
6. bmp1b ENSDARG00000028053 25 2 1.000 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
7. MYL2 MYL2 7 2 - 1.000 - 1.000 - - - - -
8. si:dkeyp-33e11.1 6 2 - 1.000 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
9. gdf9 ENSDARG00000003229 4 2 1.000 - - - - 1.000 - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
10. zgc:158654 19 2 1.000 - - 1.000 - - - - - zgc:158654, transcript variant X1
11. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 1.000 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
12. RBBP6_3 RBBP6_3 34 2 1.000 - - - - 1.000 - - -
13. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 2 - 1.000 - - - 1.000 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
14. si:ch211-188i4.4 5 2 1.000 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
15. traf1 ENSDARG00000069482 50 2 1.000 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
16. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
17. si:ch211-120c15.1 si:ch211-120c15.1 20 2 1.000 1.000 - - - - - - -
18. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 1.000 - - - - - - -
19. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 2 1.000 - - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
20. BX465203.1 ENSDARG00000113985 8 2 1.000 - - 1.000 - - - - -
21. dmrt1 ENSDARG00000007349 16 2 - 1.000 - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
22. ADAP2 ENSDARG00000070565 29 1.963 - - - - - 0.963 1.000 - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
23. neu3.5 ENSDARG00000096368 5 1.955 - 1.000 0.955 - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
24. FBXO15 ENSDARG00000016897 4 1.955 - - 0.955 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
25. fam43b ENSDARG00000070222 92 1.89 - 1.000 0.890 - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
26. NFATC4 ENSDARG00000054162 44 1.873 - 1.000 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
27. zgc:165409_1 ENSDARG00000091385 65 1.865 - 1.000 - - 0.865 - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
28. si:ch211-232m19.4 19 1.832 1.000 - 0.832 - - - - - - si:ch211-232m19.4
29. MDH1B ENSDARG00000018008 29 1.832 1.000 - 0.832 - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
30. rs1 rs1 70 1.83 1.000 - - - - - 0.830 - -
31. TRAF2 TRAF2 13 1.83 - - - 1.000 - - 0.830 - -
32. hsp70l_1 ENSDARG00000055723 72 1.825 0.825 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
33. chrna6 ENSDARG00000055559 60 1.825 0.825 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
34. CABZ01021538.1 CABZ01021538.1 67 1.824 0.824 1.000 - - - - - - -
35. si:ch211-76m11.15 ENSDARG00000098979 6 1.805 - - - - - 1.000 - - 0.805 si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
36. si:dkey-111b14.1 si:dkey-111b14.1 3 1.805 - - - 1.000 - - - - 0.805
37. galr1 galr1 9 1.805 - 1.000 - - - - - - 0.805
38. GABRA3 ENSDARG00000090883 5 1.805 - 1.000 - - - - - - 0.805 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
39. zgc:110053 zgc:110053 69 1.79 - - - - - - 0.830 - 0.960
40. CCL19_1 CCL19_1 40 1.789 - - 0.903 - - 0.886 - - -
41. CABZ01086354.1 CABZ01086354.1 22 1.789 - - - 0.789 - 1.000 - - -
42. si:dkey-176f19.5 si:dkey-176f19.5 10 1.789 1.000 - - 0.789 - - - - -
43. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1.777 - 1.000 - - - 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
44. znf512 ENSDARG00000041910 20 1.77 - 0.770 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
45. slc25a38a ENSDARG00000059805 236 1.765 - - - - - 1.000 - 0.765 - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
46. cryba1l1 ENSDARG00000032929 1868 1.761 - - - - - - 0.830 - 0.931 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
47. cnnm1 1 1.76 - - 0.955 - - - - - 0.805 cyclin and CBS domain divalent metal cation transport mediator 1, transcript variant X3
48. si:dkeyp-51f12.2 ENSDARG00000095606 24 1.752 - 1.000 0.752 - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
49. cdk20 ENSDARG00000003867 27 1.75 1.000 - - 0.750 - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
50. sc:d0661 sc:d0661 12 1.749 - - - - 0.919 - 0.830 - -
51. cdk5r1a ENSDARG00000037916 46 1.746 - 1.000 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
52. zgc:193690 34 1.738 - - - - - 0.952 - - 0.786 zgc:193690
53. PCBP3 ENSDARG00000054378 17 1.737 - - - - - 1.000 - - 0.737 poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
54. si:ch211-266l9.1 si:ch211-266l9.1 18 1.737 1.000 - - - - - 0.737 - -
55. CU856140.1 CU856140.1 4316 1.73 - - - - - 0.900 0.830 - -
56. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1.725 - - - - 0.920 - - - 0.805 si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
57. spi1a ENSDARG00000067797 113 1.724 - 0.880 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
58. nudt18 ENSDARG00000041576 61 1.724 0.724 - - - - 1.000 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
59. cryba2b ENSDARG00000041925 4329 1.719 0.719 - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
60. GPRIN1 10 1.69 - - - 0.789 - - - - 0.901 G protein regulated inducer of neurite outgrowth 1
61. lhx8a ENSDARG00000002330 25 1.687 - - - 0.908 - - - - 0.779 LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
62. sc:d217 ENSDARG00000079645 32 1.684 0.809 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
63. crygmxl1 ENSDARG00000018797 7 1.683 - - - - - - - 0.720 0.963 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
64. zgc:162972 ENSDARG00000076134 15 1.679 - - 0.847 - - - - - 0.832 zgc:162972 [Source:ZFIN;Acc:ZDB-GENE-070424-49]
65. Metazoa_SRP_25 Metazoa_SRP_25 13 1.678 - - - - - 0.873 - - 0.805
66. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.675 - - - - - 0.935 0.740 - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
67. RBM33_1 RBM33_1 7 1.675 - - 0.849 - - - - - 0.826
68. crygm2d14 ENSDARG00000087301 66 1.67 - - - - - - - 0.702 0.968 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
69. wasb ENSDARG00000026350 139 1.669 0.812 - - - - 0.857 - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
70. golga2 ENSDARG00000063197 30 1.667 - 0.794 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
71. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1.665 - - 0.786 0.879 - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
72. CABZ01041804.1 CABZ01041804.1 312 1.653 - 0.880 - - 0.773 - - - -
73. SH2D1B SH2D1B 60 1.624 - 0.794 - - - - 0.830 - -
74. si:ch73-173m3.3 si:ch73-173m3.3 425 1.623 0.751 0.872 - - - - - - -
75. im:6903943 im:6903943 26 1.617 - - - - - 0.787 0.830 - -
76. porcnl ENSDARG00000052455 29 1.615 0.895 - - - - - - 0.720 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
77. syce2 ENSDARG00000103187 12 1.601 - - 0.832 - - 0.769 - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
78. ggh ENSDARG00000037176 9 1.586 0.825 - - - - 0.761 - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
79. SMOC1 ENSDARG00000088255 507 1.572 - 0.862 - 0.710 - - - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
80. prkacbb_1 ENSDARG00000059125 83 1.565 - - - - - 0.735 0.830 - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
81. pmelb ENSDARG00000033760 206 1.561 - - - - - 0.812 - - 0.749 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
82. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.551 0.789 - - - - - - - 0.762 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
83. npvf ENSDARG00000036227 23 1.551 - - - - - - - 0.720 0.831 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
84. CDH16 ENSDARG00000077570 78 1.539 - - - - - 0.814 0.725 - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
85. TKT TKT 298 1.523 - - - - - 0.708 - - 0.815
86. dnm2a ENSDARG00000069937 32 1.512 - 0.780 - - - 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
87. pax1a ENSDARG00000008203 150 1.508 - 0.794 0.714 - - - - - - paired box 1a [Source:ZFIN;Acc:ZDB-GENE-070112-182]
88. CR391967.1 CR391967.1 135 1.482 - - - 0.754 - - - - 0.728
89. ugt2a4 ENSDARG00000051940 85 1.457 - - - - 0.708 0.749 - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
90. pitx3 ENSDARG00000070069 363 1.437 0.705 - - - - - - - 0.732 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
91. trmt5 ENSDARG00000069278 228 1.427 0.701 - - - 0.726 - - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
92. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
93. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
94. HIPK1 HIPK1 8 1 - - - - - 1.000 - - -
95. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
96. cyp2aa2 ENSDARG00000104811 77 1 - - - - - 1.000 - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
97. CDH12 CDH12 44 1 - - 1.000 - - - - - -
98. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
99. GLS2 GLS2 10 1 - 1.000 - - - - - - -
100. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]

There are 1425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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