Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mcm4

Gene Name Gene ID Reads Annotation
mcm4 ENSDARG00000040041 7971 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]










Genes with expression patterns similar to mcm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mcm4 ENSDARG00000040041 7971 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
2. prmt1 ENSDARG00000010246 11311 2.917 - - - - 0.706 0.712 0.750 0.749 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
3. ppm1g ENSDARG00000075559 6516 2.646 - - 0.886 - 0.906 - - - 0.854 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
4. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 2.501 - 0.918 - - - - 0.808 - 0.775 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
5. ptenb ENSDARG00000056623 5783 2.412 - - - - 0.752 0.811 0.849 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
6. srsf11 ENSDARG00000098574 12801 2.408 - - - 0.904 - - 0.745 - 0.759 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
7. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.349 - - 0.889 - - - 0.725 0.735 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
8. rbb4 rbb4 15541 2.332 - - - 0.876 - - 0.719 0.737 -
9. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 2.31 - - 0.783 - - 0.716 - - 0.811 alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
10. nr2f6b ENSDARG00000003165 5855 2.266 0.722 - - - 0.759 - 0.785 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
11. hdac1 ENSDARG00000015427 19804 2.245 0.736 - - 0.758 - - - - 0.751 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
12. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 2.228 - - 0.704 0.806 - - 0.718 - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
13. bag6 ENSDARG00000075892 3782 2.225 0.726 - 0.765 - - 0.734 - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
14. clta ENSDARG00000045618, ENSDARG00000115484 11767 2.193 - - - - - 0.719 0.760 - 0.714 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
15. cbx5 ENSDARG00000061187 24026 2.182 0.714 - - 0.715 - - 0.753 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
16. hat1 ENSDARG00000034916 5712 1.812 - - - - 0.931 - - - 0.881 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
17. efnb3b ENSDARG00000042277 5823 1.785 - - 0.826 0.959 - - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
18. dkc1 ENSDARG00000016484 7088 1.773 - - - 0.915 - - - - 0.858 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
19. psma3 ENSDARG00000086618 6200 1.762 - - - 0.849 0.913 - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
20. ANKRD11 ENSDARG00000051886 10024 1.759 - - - 0.967 - - 0.792 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
21. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.756 - 0.926 - - - - - - 0.830 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
22. eftud2 ENSDARG00000012261 3081 1.728 - - 0.801 0.927 - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
23. FP085405.1 FP085405.1 5189 1.698 - - - - - - 0.853 - 0.845
24. tubg1 ENSDARG00000015610 2433 1.693 - - - - 0.888 - 0.805 - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
25. arpp19b ENSDARG00000039880 4823 1.692 - - 0.854 0.838 - - - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
26. wdr43 ENSDARG00000077264 1992 1.691 - - - - - - 0.863 - 0.828 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
27. nanos1 ENSDARG00000109337 2494 1.689 - 0.926 - - - - - - 0.763 nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
28. h2afy2_1 ENSDARG00000087897 9887 1.687 - - - - 0.892 - 0.795 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
29. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.687 - 0.924 0.763 - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
30. hmgb3a ENSDARG00000056725 15668 1.687 - - 0.731 0.956 - - - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
31. arpc4 ENSDARG00000054063 6150 1.682 - 0.796 - 0.886 - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
32. HNRNPAB HNRNPAB 22267 1.68 - 0.936 - - - - 0.744 - -
33. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.676 - - 0.904 - - - 0.772 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
34. nmt1a ENSDARG00000052966 5918 1.673 - - - 0.828 - - - 0.845 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
35. cdk6 ENSDARG00000070228 1778 1.673 - - - - 0.906 - 0.767 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
36. psmd13 ENSDARG00000016239 4229 1.672 - 0.918 - - - 0.754 - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
37. tjp1a ENSDARG00000077506 2658 1.671 - - - 0.842 - - - - 0.829 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
38. ncalda ENSDARG00000070688 5069 1.67 - - 0.816 0.854 - - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
39. NRD1 NRD1 3486 1.667 - - - - 0.895 - - 0.772 -
40. gorasp2 ENSDARG00000015126 3923 1.666 - - - - 0.869 - 0.797 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
41. e2f7 ENSDARG00000008986 1439 1.663 - - - - 0.889 - - 0.774 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
42. cldn5a ENSDARG00000043716 3865 1.661 - - 0.874 - - - - 0.787 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
43. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.658 - - 0.796 0.862 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
44. ubtf ENSDARG00000035066 4070 1.657 - - 0.840 - - - 0.817 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
45. acvr1b acvr1b 2963 1.653 - - - - 0.873 - 0.780 - -
46. hyou1 ENSDARG00000013670 4172 1.651 - - - - 0.863 - - - 0.788 hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
47. vta1 ENSDARG00000013732 6072 1.646 - - 0.759 - 0.887 - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
48. ccne2 ENSDARG00000098529 4695 1.644 - - - - 0.932 - 0.712 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
49. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.643 - - - 0.839 - - 0.804 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
50. tead1a ENSDARG00000028159 3574 1.641 - - - - 0.887 - 0.754 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
51. khsrp ENSDARG00000026489 15738 1.64 - - 0.803 - - - 0.837 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
52. plscr3b ENSDARG00000069432 8500 1.636 - 0.918 - - - - 0.718 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
53. rmi1 ENSDARG00000041376 674 1.635 - 0.927 0.708 - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
54. srrm1 ENSDARG00000001244 4972 1.634 - - - - 0.790 - - - 0.844 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
55. emc3 ENSDARG00000020607 3406 1.632 - - 0.790 0.842 - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
56. dnttip2 ENSDARG00000057648 2381 1.632 - - - 0.848 - - - 0.784 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
57. anp32b ENSDARG00000023330 25013 1.632 - - - 0.866 - - 0.766 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
58. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 1.623 - - - - - - 0.828 - 0.795 ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
59. atp6v1c1a ENSDARG00000023967 4611 1.619 - - - - - - 0.848 - 0.771 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
60. mbd3a ENSDARG00000061774 4047 1.615 - - - - 0.901 - - 0.714 - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
61. CCDC106 CCDC106 1908 1.613 - - - - 0.876 - - 0.737 -
62. sf3a3 ENSDARG00000100114 4511 1.612 - - 0.836 - - - - 0.776 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
63. CABZ01028296.1 CABZ01028296.1 6203 1.612 - 0.814 - - 0.798 - - - -
64. pgam5 ENSDARG00000035608 4044 1.612 - - - - - 0.752 - - 0.860 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
65. kif3b ENSDARG00000101120 1158 1.611 - - - 0.877 - - - - 0.734 kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
66. mau2 ENSDARG00000042056 2378 1.611 - - - - - - 0.742 - 0.869 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
67. greb1 ENSDARG00000070794 1741 1.608 - - - - 0.881 - - - 0.727 growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
68. kifc1 ENSDARG00000001558 6658 1.607 - - - - 0.889 - 0.718 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
69. dlb ENSDARG00000004232 5120 1.598 - - 0.860 - - - - 0.738 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
70. ARHGAP23 ARHGAP23 3946 1.597 - - 0.726 - 0.871 - - - -
71. pik3r1 ENSDARG00000038524 3615 1.594 - - - - 0.875 - - 0.719 - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
72. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.593 - - 0.717 - 0.876 - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
73. rb1 ENSDARG00000006782 1445 1.592 - - - 0.843 - - - 0.749 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
74. MAPRE2 ENSDARG00000099943 3041 1.588 - - - - 0.888 - 0.700 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
75. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.587 - 0.841 - 0.746 - - - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
76. hnrpl 6412 1.586 - - - - 0.829 - 0.757 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
77. ppp4cb ENSDARG00000076439 1693 1.586 - - 0.768 - - - - - 0.818 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
78. snrpe ENSDARG00000033175 7462 1.584 - - - 0.848 - - 0.736 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
79. snrpf ENSDARG00000105037 10241 1.581 - - - - - 0.737 0.844 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
80. srgap2a srgap2a 7197 1.58 - - - 0.877 - - 0.703 - -
81. rc3h1 rc3h1 1087 1.577 - - - - 0.875 - 0.702 - -
82. xrcc5_1 ENSDARG00000099298 1533 1.577 - - - - - - - 0.754 0.823 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
83. PPP1R8 PPP1R8 1897 1.576 - - - 0.847 - - - 0.729 -
84. rab5c ENSDARG00000026712 4733 1.575 - - 0.746 0.829 - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
85. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.574 - - - - - - - 0.747 0.827 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
86. fzr1 fzr1 2984 1.574 - - 0.728 0.846 - - - - -
87. npm1b ENSDARG00000037675 5448 1.57 - - - - - - 0.826 - 0.744 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
88. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.57 - - - - 0.829 - - 0.741 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
89. znf292b ENSDARG00000043973 3791 1.569 - - 0.803 - - - 0.766 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
90. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.569 - - - - 0.813 - 0.756 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
91. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.568 - - - - 0.865 - - - 0.703 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
92. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.567 - - 0.828 - - - - 0.739 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
93. tmem222a ENSDARG00000069589 1766 1.567 - - 0.726 - - - 0.841 - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
94. atf4b2 atf4b2 4734 1.566 - - - - - - 0.776 - 0.790
95. sh3gl3a ENSDARG00000013360 3602 1.565 - - - 0.847 - - - 0.718 - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
96. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.563 0.755 - - - 0.808 - - - - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
97. ubr4 ENSDARG00000009549 5565 1.562 - - 0.701 - 0.861 - - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
98. h2afva ENSDARG00000068820 16427 1.561 - - - - 0.802 - 0.759 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
99. mrpl11 ENSDARG00000013075 2927 1.56 - - 0.729 0.831 - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
100. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.559 - - - 0.850 - - 0.709 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]

There are 1587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA