Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mcee

Gene Name Gene ID Reads Annotation
mcee ENSDARG00000045428 1107 methylmalonyl CoA epimerase [Source:ZFIN;Acc:ZDB-GENE-050522-368]










Genes with expression patterns similar to mcee

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mcee ENSDARG00000045428 1107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methylmalonyl CoA epimerase [Source:ZFIN;Acc:ZDB-GENE-050522-368]
2. drg2 ENSDARG00000006642 1167 1.531 - 0.804 - - - - 0.727 - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
3. thbs1b ENSDARG00000010785 3095 1.506 - 0.719 - - - - 0.787 - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
4. pdpk1b ENSDARG00000018285 957 1.476 - 0.776 - - - - 0.700 - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
5. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 1.457 - - - 0.736 - - - 0.721 - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
6. nop58 ENSDARG00000104353 8497 1.435 - - - - - 0.703 0.732 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
7. esd ENSDARG00000019496 3192 1.431 - 0.720 - - - - 0.711 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
8. tmem126a ENSDARG00000014506 1050 0.873 - - - - - 0.873 - - - transmembrane protein 126A [Source:ZFIN;Acc:ZDB-GENE-040426-1770]
9. SEC24A ENSDARG00000104375 2614 0.854 - - - - - - - 0.854 - SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
10. tanc2 tanc2 804 0.851 - - - 0.851 - - - - -
11. chst10 ENSDARG00000031632 461 0.83 - - - 0.830 - - - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
12. mhc1zba ENSDARG00000036588 761 0.824 - - - 0.824 - - - - - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
13. atpv0e2 ENSDARG00000059057 585 0.823 - - - 0.823 - - - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
14. pak4 ENSDARG00000018110 1962 0.816 - - - - - - 0.816 - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
15. nudcd3 ENSDARG00000098361 538 0.811 - - - 0.811 - - - - - NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]
16. bnc2 ENSDARG00000069989 757 0.81 - - - - - 0.810 - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
17. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.809 - 0.809 - - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
18. spry2 ENSDARG00000078308 1200 0.805 - - - 0.805 - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
19. C3H16orf72 C3H16orf72 2059 0.804 - - - 0.804 - - - - -
20. nat10 ENSDARG00000054259 1310 0.803 - - - - - - 0.803 - - N-acetyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1543]
21. zgc:65997 ENSDARG00000043562, ENSDARG00000114791, ENSDARG00000115351 606 0.803 - - - - - - - 0.803 - zgc:65997 [Source:ZFIN;Acc:ZDB-GENE-040426-1502]
22. SURF2 ENSDARG00000112476 592 0.801 - - - - - - 0.801 - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
23. grsf1 ENSDARG00000053021 2752 0.797 - 0.797 - - - - - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
24. tpcn1 ENSDARG00000062362 563 0.797 - - - - - 0.797 - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
25. zgc:86609 ENSDARG00000029479 923 0.795 - - - - - - 0.795 - - zgc:86609 [Source:ZFIN;Acc:ZDB-GENE-050102-7]
26. scyl3 ENSDARG00000027046 643 0.795 - 0.795 - - - - - - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
27. acat1 ENSDARG00000045888 1488 0.794 - - - - - - 0.794 - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
28. PPAP2A PPAP2A 2409 0.793 - - - - - - 0.793 - -
29. si:ch73-266f23.1 ENSDARG00000095135, ENSDARG00000105728 1338 0.793 - 0.793 - - - - - - - si:ch73-266f23.1 [Source:ZFIN;Acc:ZDB-GENE-110913-180]
30. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 0.792 - - - - - - - 0.792 - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
31. tmem201 ENSDARG00000077307 453 0.79 - - - - - - - 0.790 - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
32. CU929408.1 CU929408.1 714 0.79 - - - - - - - 0.790 -
33. si:ch73-196i15.3 ENSDARG00000094281 1005 0.79 - - - 0.790 - - - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
34. zic4 ENSDARG00000031307 1228 0.789 - - - - - - - 0.789 - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
35. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 0.785 - - - - - - - 0.785 - laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
36. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 0.785 - 0.785 - - - - - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
37. pof1b ENSDARG00000054060 2355 0.783 - - - 0.783 - - - - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
38. mbd6 ENSDARG00000086980 655 0.78 - - - - - - - 0.780 - methyl-CpG binding domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-041027-3]
39. map4k3a ENSDARG00000087742 771 0.78 - 0.780 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
40. zfr ENSDARG00000027109, ENSDARG00000116459 4171 0.779 - 0.779 - - - - - - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
41. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 0.779 - 0.779 - - - - - - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
42. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.777 - 0.777 - - - - - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
43. C19H16orf80 C19H16orf80 1327 0.776 - - - - - 0.776 - - -
44. fam13a ENSDARG00000075564 1905 0.775 - 0.775 - - - - - - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
45. GUSB ENSDARG00000063126 2712 0.775 - - - - - - 0.775 - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
46. XPR1 XPR1 3354 0.774 - - - 0.774 - - - - -
47. SRR SRR 544 0.774 - 0.774 - - - - - - -
48. rc3h1 rc3h1 1087 0.773 - - - 0.773 - - - - -
49. zgc:193681 187 0.773 - 0.773 - - - - - - - zgc:193681, transcript variant X1
50. slc15a2 ENSDARG00000032010 451 0.772 - 0.772 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5866]
51. ADAMTSL4 ENSDARG00000063407 1045 0.769 - - - - - - 0.769 - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
52. fnta ENSDARG00000099143 1845 0.768 - - - - - 0.768 - - - farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
53. loxl5b ENSDARG00000076904 468 0.768 - - - - - - - 0.768 - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
54. cnot3a ENSDARG00000007135 3084 0.767 - 0.767 - - - - - - - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
55. hey1 ENSDARG00000070538 986 0.765 - - - 0.765 - - - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
56. DMXL1 DMXL1 798 0.765 - - - 0.765 - - - - -
57. NOP14 ENSDARG00000098859 1288 0.764 - - - - - - 0.764 - - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
58. ptdss1 ptdss1 1143 0.764 - - - - - 0.764 - - -
59. osgn1 ENSDARG00000052279 5607 0.762 - - - 0.762 - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
60. fhdc1 ENSDARG00000074812 934 0.762 - - - 0.762 - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
61. si:dkey-14o1.14 si:dkey-14o1.14 142 0.762 - - - 0.762 - - - - -
62. cluh cluh 3851 0.761 - - - - - - 0.761 - -
63. psmb2 ENSDARG00000031511 4016 0.76 - - - - - - 0.760 - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
64. BX005069.4 BX005069.4 61 0.757 - - - - - 0.757 - - -
65. colec12 ENSDARG00000061140 1323 0.757 - - - - - - 0.757 - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
66. si:dkey-117n7.5 ENSDARG00000089640 452 0.757 - - - 0.757 - - - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
67. CABZ01075242.1 ENSDARG00000114227 9 0.757 - - - - - 0.757 - - -
68. dhodh ENSDARG00000051889 401 0.757 - 0.757 - - - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
69. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 0.756 - - - - - - 0.756 - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
70. nars ENSDARG00000061100 2948 0.756 - - - - - - 0.756 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
71. rrs1 ENSDARG00000003941 1257 0.755 - 0.755 - - - - - - - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
72. pi4k2b ENSDARG00000013881 1337 0.755 - - - - - - - 0.755 - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
73. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 0.755 - - - - - - 0.755 - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
74. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 0.754 - 0.754 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
75. GPALPP1 ENSDARG00000058287 1858 0.754 - 0.754 - - - - - - - GPALPP motifs containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-212]
76. hsbp1b ENSDARG00000041921 6170 0.752 - 0.752 - - - - - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
77. usp44 ENSDARG00000089861 1532 0.751 - 0.751 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
78. erlin1 ENSDARG00000021991 5664 0.75 - - - - - - 0.750 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
79. bcs1l ENSDARG00000012295 664 0.75 - - - - - - 0.750 - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
80. ndufa11 ENSDARG00000042777 2757 0.75 0.750 - - - - - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
81. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.749 - - - - - - 0.749 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
82. creg2 ENSDARG00000000666 643 0.748 - - - 0.748 - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
83. WU:FC32F04 WU:FC32F04 2525 0.748 - 0.748 - - - - - - -
84. notum1a ENSDARG00000031126 825 0.748 - - - 0.748 - - - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
85. cd248a ENSDARG00000103713, ENSDARG00000109369 1415 0.744 - - - - - - 0.744 - - CD248 molecule, endosialin a [Source:ZFIN;Acc:ZDB-GENE-030131-2084]
86. nelfb ENSDARG00000035505 1337 0.744 - - - - - - - 0.744 - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
87. vmp1 ENSDARG00000012450 2891 0.744 - - - - - 0.744 - - - vacuole membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8733]
88. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.744 - - - - - - - 0.744 - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
89. nploc4 ENSDARG00000100487 1262 0.743 - 0.743 - - - - - - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
90. BBX ENSDARG00000012699 79 0.743 - 0.743 - - - - - - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
91. ndufb11 ENSDARG00000043467 7495 0.742 - - - - - - 0.742 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
92. mrps23 ENSDARG00000033973 2265 0.741 - - - - - - 0.741 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
93. shhb ENSDARG00000038867 338 0.74 - - - - - - - 0.740 - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
94. pex19 ENSDARG00000004891 2317 0.74 - 0.740 - - - - - - - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
95. dcn ENSDARG00000012066 6182 0.74 - 0.740 - - - - - - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
96. CABZ01070045.1 CABZ01070045.1 1322 0.739 - - - 0.739 - - - - -
97. si:dkey-261h17.1 ENSDARG00000095268 11403 0.739 - - - - - - 0.739 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
98. FRG1 ENSDARG00000056504 1196 0.738 - 0.738 - - - - - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
99. csmd2 ENSDARG00000001559 203 0.738 - 0.738 - - - - - - - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
100. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 0.738 - 0.738 - - - - - - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]

There are 146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA