Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mbd3b

Gene Name Gene ID Reads Annotation
mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]










Genes with expression patterns similar to mbd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
2. tmpob ENSDARG00000022978 8121 4.992 0.762 - - 0.825 - 0.804 0.886 0.831 0.884 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
3. hnrnpub ENSDARG00000004735 16496 4.858 0.737 0.906 - 0.706 - 0.860 0.840 - 0.809 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
4. tuba1c ENSDARG00000055216 8384 4.303 0.878 - - - 0.758 0.969 0.849 - 0.849 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
5. nova2 ENSDARG00000017673 7685 4.27 0.887 - - 0.713 - 0.919 0.868 - 0.883 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
6. myt1b ENSDARG00000102879 5411 4.249 0.781 - - - - 0.950 0.835 0.847 0.836 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
7. khsrp ENSDARG00000026489 15738 4.224 0.818 0.983 - - - 0.852 0.735 - 0.836 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
8. stmn1b ENSDARG00000033655 9491 4.216 0.808 - - - - 0.913 0.860 0.784 0.851 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
9. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 4.21 0.814 - - 0.735 - 0.863 - 0.926 0.872 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
10. TUBA1A ENSDARG00000001889 25294 4.187 0.779 - - 0.714 - 0.957 0.872 0.865 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
11. tox ENSDARG00000032317 9126 4.08 0.789 - - - - 0.867 0.831 0.762 0.831 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
12. pou3f3a ENSDARG00000042032 2835 4.045 0.845 - - 0.772 - 0.778 0.877 - 0.773 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
13. tmem35 ENSDARG00000052567 5685 3.985 0.756 - - - - 0.837 0.838 0.789 0.765 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
14. fabp7a ENSDARG00000007697 5211 3.97 - 0.974 - 0.724 0.789 - 0.753 - 0.730 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
15. cspg5a ENSDARG00000069981 1699 3.953 0.825 - - 0.733 - 0.740 0.851 - 0.804 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
16. fam60al 2846 3.916 0.851 - - - 0.718 0.880 0.759 - 0.708 family with sequence similarity 60, member A, like
17. cd99l2 ENSDARG00000056722 5036 3.85 0.729 - - 0.735 - 0.916 0.745 - 0.725 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
18. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.819 0.783 - - 0.718 - 0.780 0.833 - 0.705 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
19. hmgb3a ENSDARG00000056725 15668 3.527 0.863 - - - - 0.939 0.875 - 0.850 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
20. sumo3a ENSDARG00000028119 13447 3.486 - 0.980 - - - 0.891 0.766 - 0.849 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
21. plp1a ENSDARG00000103732 3544 3.458 0.865 - - - - 0.943 0.845 - 0.805 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
22. dpysl5a ENSDARG00000011141 1827 3.422 0.892 - - - - 0.937 0.830 - 0.763 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
23. lfng ENSDARG00000037879 11783 3.404 0.858 - - 0.855 - 0.907 - - 0.784 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
24. tubb5 ENSDARG00000037997 18691 3.374 0.771 0.997 - 0.767 - - 0.839 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
25. vezf1a ENSDARG00000008247 1449 3.355 - - - - 0.725 0.912 0.891 - 0.827 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
26. nrarpb ENSDARG00000018958 6225 3.353 0.806 - - - - 0.929 0.859 0.759 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
27. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.339 0.903 - - - - 0.885 0.820 - 0.731 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
28. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.319 0.881 - - - - 0.858 0.851 - 0.729 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
29. hmgb1b ENSDARG00000030479 10398 3.31 0.816 - - - - 0.888 0.887 0.719 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
30. sox2 ENSDARG00000070913 2763 3.31 0.854 - - - - 0.771 0.824 0.861 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
31. msi1 ENSDARG00000010710 2634 3.296 0.777 - - - - 0.888 0.836 - 0.795 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
32. pax6a ENSDARG00000103379 3061 3.292 0.862 - - - 0.702 0.936 0.792 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
33. mdkb ENSDARG00000020708 5393 3.283 0.706 - - - - 0.927 0.804 - 0.846 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
34. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.283 - - - 0.717 - 0.939 0.884 - 0.743 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
35. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.28 0.924 - - 0.781 - - 0.848 - 0.727 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
36. her4.1 ENSDARG00000056732 1264 3.279 0.715 - - - - 0.936 0.775 - 0.853 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
37. nbeaa ENSDARG00000070080 862 3.259 0.915 - - - - 0.812 0.823 - 0.709 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
38. dpysl3 ENSDARG00000002587 4381 3.251 0.717 - - - - 0.903 0.844 - 0.787 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
39. negr1 ENSDARG00000021607 1051 3.239 0.835 - - - 0.702 0.880 0.822 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
40. CABZ01111990.1 CABZ01111990.1 4374 3.236 0.802 - - - - 0.760 0.842 - 0.832
41. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.233 0.755 - - - - - 0.849 0.763 0.866 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
42. dnajc5aa ENSDARG00000042948 2885 3.228 0.757 - - - - 0.881 0.878 0.712 - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
43. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.223 0.744 - - - - 0.866 0.861 - 0.752 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
44. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.197 - - - 0.762 - 0.844 0.890 - 0.701 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
45. ptbp2b ENSDARG00000015901 2458 3.183 0.714 - - - - 0.881 0.874 - 0.714 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
46. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.155 - - - - 0.716 0.889 0.809 - 0.741 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
47. fzd3a ENSDARG00000021664 1958 3.141 0.823 - - - - 0.751 0.855 - 0.712 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
48. srsf6b ENSDARG00000016783 9926 3.139 - - - 0.846 0.703 0.811 - - 0.779 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
49. smarcd1 ENSDARG00000019004 6028 3.131 - - - 0.738 0.750 - 0.848 - 0.795 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
50. C8H1orf106 C8H1orf106 2690 3.127 0.889 - - - - 0.734 0.795 - 0.709
51. clstn1 ENSDARG00000031720 5286 3.124 0.854 - - - - 0.762 0.807 0.701 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
52. fez1 ENSDARG00000023174 701 3.103 0.753 - - - - 0.893 0.713 - 0.744 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
53. hdac1 ENSDARG00000015427 19804 3.035 0.776 - - - - 0.806 - 0.741 0.712 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
54. nhlh2 ENSDARG00000025495 1860 3.032 - - - - - 0.718 0.856 0.750 0.708 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
55. whsc1l1 8544 2.993 - - - - - 0.715 0.729 0.720 0.829 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
56. wu:fb17g07 wu:fb17g07 10567 2.966 0.716 - - - - 0.739 0.765 - 0.746
57. smc1al ENSDARG00000058203 8838 2.948 0.719 - - - - 0.746 0.746 - 0.737 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
58. dnaja2l ENSDARG00000010745 2367 2.903 - - - - 0.720 0.711 - 0.723 0.749 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
59. gfap ENSDARG00000025301 5584 2.758 0.941 - - - - 0.975 0.842 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
60. notch1b ENSDARG00000052094 7874 2.731 - 0.999 - - - 0.891 0.841 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
61. pcdh1gc5 ENSDARG00000104826 10052 2.692 0.857 - - - - 0.979 0.856 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
62. mir10d-1 mir10d-1 860 2.651 0.863 - - - - 0.919 0.869 - -
63. UBE2QL1 ENSDARG00000079276 3474 2.649 0.913 - - - - 0.842 0.894 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
64. ncana 1537 2.643 0.904 - - - - 0.927 0.812 - - neurocan a
65. dla ENSDARG00000010791 9281 2.641 0.919 - - - - - 0.852 - 0.870 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
66. kcnc3a ENSDARG00000055855 1821 2.636 0.867 - - - - 0.944 0.825 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
67. epha4b ENSDARG00000011600 3110 2.632 0.933 - - - - 0.873 0.826 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
68. scrt2 ENSDARG00000056175 4331 2.627 0.879 - - - - 0.977 0.771 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
69. slc1a3a ENSDARG00000104431 9888 2.627 0.803 - - - - 0.969 0.855 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
70. rab3ab ENSDARG00000043835 1267 2.625 0.830 - - - - 0.961 0.834 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
71. nadl1.1 1200 2.623 0.863 - - - - 0.929 0.831 - - neural adhesion molecule L1.1, transcript variant X1
72. syt11a ENSDARG00000057913 1145 2.622 0.844 - - - - 0.940 0.838 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
73. vim ENSDARG00000010008 3551 2.62 0.911 - - - - 0.911 0.798 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
74. si:ch73-21g5.7 ENSDARG00000093156 9412 2.618 0.873 - - - - 0.899 0.846 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
75. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.614 0.819 - - - - 0.949 0.846 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
76. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.613 - - - - - 0.932 0.818 - 0.863 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
77. atp6v0cb ENSDARG00000036577 3472 2.611 0.759 - - - - 0.977 0.875 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
78. tuba8l3 ENSDARG00000070155 7525 2.61 0.801 0.995 - - - 0.814 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
79. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.596 0.789 - - - - 0.950 0.857 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
80. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.591 0.840 - - - - 0.902 0.849 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
81. mllt11 ENSDARG00000071026 2518 2.586 0.817 - - - - 0.973 0.796 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
82. SPOCK1 ENSDARG00000074644 794 2.585 0.874 - - - - 0.858 0.853 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
83. stx1b ENSDARG00000000503 2724 2.585 0.806 - - - - 0.949 0.830 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
84. slc17a6b ENSDARG00000041150 823 2.585 0.822 - - - - 0.945 0.818 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
85. neurog1 ENSDARG00000056130 3924 2.583 0.936 - - - - 0.801 0.846 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
86. mapk12b ENSDARG00000006409 2246 2.582 0.821 - - - - 0.911 0.850 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
87. hmp19 2554 2.579 0.805 - - - - 0.941 0.833 - - HMP19 protein
88. AGO1 ENSDARG00000092644 4521 2.578 0.905 - - - - 0.834 0.839 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
89. atp1b4 ENSDARG00000053262 1337 2.573 0.793 - - - - 0.962 0.818 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
90. hoxa9b ENSDARG00000056819 3081 2.57 0.846 - - - - 0.846 0.878 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
91. ppp3ca ENSDARG00000004988 615 2.569 0.827 - - - - 0.908 0.834 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
92. ROBO3_1 ROBO3_1 468 2.568 0.805 - - - - 0.947 0.816 - -
93. TUBB8P7_1 TUBB8P7_1 2722 2.568 0.786 - - - - 0.953 0.829 - -
94. pcsk1nl ENSDARG00000076170 1232 2.566 0.806 - - - - 0.923 0.837 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
95. slc18a3a ENSDARG00000006356 1285 2.562 0.787 - - - - 0.920 0.855 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
96. ckbb ENSDARG00000043257 3503 2.562 0.799 - - - - 0.923 0.840 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
97. celf3a ENSDARG00000034668 2432 2.56 - - - - - 0.978 0.764 - 0.818 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
98. nes ENSDARG00000088805 2710 2.559 0.882 - - - - 0.838 0.839 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
99. npas3b npas3b 1446 2.556 0.904 - - - - 0.812 0.840 - -
100. amph ENSDARG00000007663 599 2.554 0.809 - - - - 0.935 0.810 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]

There are 1930 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA