Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mbd3a

Gene Name Gene ID Reads Annotation
mbd3a ENSDARG00000061774 4047 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]










Genes with expression patterns similar to mbd3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mbd3a ENSDARG00000061774 4047 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
2. nhsl1b ENSDARG00000042627 3697 2.748 - 0.844 - - 0.937 - 0.967 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
3. csnk1db ENSDARG00000006125 2581 2.69 - - - - - 0.804 0.960 0.926 - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
4. arid1aa ENSDARG00000101710 3644 2.574 - - - - 0.873 - 0.969 - 0.732 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
5. scaf11 ENSDARG00000045885 3531 2.571 - - - 0.711 0.963 - - 0.897 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
6. ube2e3 ENSDARG00000012244 8909 2.538 - - - - 0.965 0.766 0.807 - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
7. stag1b ENSDARG00000062137 1814 2.502 0.817 - - - - - 0.974 - 0.711 stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
8. srrm1 ENSDARG00000001244 4972 2.475 - 0.852 - - 0.807 0.816 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
9. lsm4 ENSDARG00000023852 6083 2.463 - - - - - 0.778 0.964 - 0.721 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
10. pou2f1b ENSDARG00000007996 2172 2.408 0.729 - - - 0.977 0.702 - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
11. wu:fk48d07 wu:fk48d07 13245 2.389 0.717 - - - - - 0.901 - 0.771
12. si:ch211-198j3.1 si:ch211-198j3.1 5487 2.373 - 0.722 - - - - 0.915 - 0.736
13. hsbp1b ENSDARG00000041921 6170 2.351 - 0.790 - - 0.710 - - 0.851 - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
14. EIF4G1 EIF4G1 19676 2.349 - - - - 0.800 - 0.805 - 0.744
15. TAF15 ENSDARG00000070019 5102 2.246 - 0.787 - - - 0.724 - - 0.735 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
16. celf1 ENSDARG00000005315 5598 2.19 0.711 0.779 - - - - - - 0.700 cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
17. G3BP2 ENSDARG00000014790 9380 2.165 - 0.756 - 0.707 - 0.702 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
18. zgc:77086 ENSDARG00000014015 4908 1.922 - - - - 0.971 - 0.951 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
19. pcyt2 ENSDARG00000043003 3506 1.898 - - - - - - 0.973 0.925 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
20. nrf1 ENSDARG00000000018 4683 1.851 - - - - - - 0.978 0.873 - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
21. LRP10 ENSDARG00000054539 1895 1.837 - - - - - - 0.969 0.868 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
22. pdcd10b ENSDARG00000012591 3395 1.836 - - - - - - 0.976 0.860 - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
23. myo9b ENSDARG00000077410 1956 1.832 - - - - - - 0.956 0.876 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
24. cand1 ENSDARG00000017841 8164 1.818 - 0.846 - - 0.972 - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
25. hat1 ENSDARG00000034916 5712 1.781 - - - - 0.902 0.879 - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
26. xpo1a ENSDARG00000078041 3544 1.773 - - - - - 0.871 - 0.902 - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
27. kif11 ENSDARG00000010948 4973 1.773 - 0.803 - - - - 0.970 - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
28. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.759 - - - - - 0.788 0.971 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
29. net1 ENSDARG00000032765 6738 1.757 - - - - 0.945 - 0.812 - - neuroepithelial cell transforming 1 [Source:ZFIN;Acc:ZDB-GENE-041121-18]
30. prpf8 ENSDARG00000026180 7026 1.749 - - - - - 0.809 0.940 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
31. setbp1 ENSDARG00000093799 4499 1.742 - - - - - - 0.974 - 0.768 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
32. gorasp2 ENSDARG00000015126 3923 1.739 - - - - 0.980 0.759 - - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
33. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.738 - 0.765 - - - - 0.973 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
34. mat2b ENSDARG00000012932 3146 1.735 - - - - 0.978 0.757 - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
35. kmt2bb ENSDARG00000060697 5230 1.733 - - - 0.753 - - 0.980 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
36. cstf3 ENSDARG00000018904 6111 1.725 - - - - - 0.753 0.972 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
37. gapdhs ENSDARG00000039914 8760 1.724 - 0.762 - - - - 0.962 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
38. hddc3 ENSDARG00000020473 2814 1.721 - - - - - 0.762 0.959 - - HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
39. hdgfrp2 7462 1.718 - 0.739 - - - - 0.979 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
40. sly1 sly1 2403 1.716 - 0.840 - - - - - 0.876 -
41. med14 ENSDARG00000009953 1383 1.715 - - - - - - 0.979 - 0.736 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
42. safb ENSDARG00000020467 5608 1.711 - - - - 0.967 - - - 0.744 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
43. strap ENSDARG00000007405 6426 1.71 - - - - - 0.732 0.978 - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
44. sppl3 ENSDARG00000025220 1892 1.705 - 0.721 - - - - 0.984 - - signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
45. e2f7 ENSDARG00000008986 1439 1.705 - 0.730 - - 0.975 - - - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
46. CDCA4 ENSDARG00000042319 7918 1.702 - - - 0.730 - - 0.972 - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
47. srsf2a ENSDARG00000057484 25721 1.698 - - - 0.766 0.932 - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
48. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.697 - 0.772 - - - - 0.925 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
49. lin7c ENSDARG00000027322 3083 1.697 - - - - - 0.721 0.976 - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
50. sipa1l2 ENSDARG00000061640 4545 1.696 - - - - 0.957 0.739 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
51. CNOT4 CNOT4 899 1.695 - - - - - 0.718 0.977 - -
52. fkbp8 ENSDARG00000001734 1709 1.693 - 0.716 - - - - 0.977 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
53. xpo1b ENSDARG00000063229 2529 1.688 - - - - - - 0.975 - 0.713 exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
54. ralbp1 ENSDARG00000078653 2440 1.688 - 0.705 - - - - 0.983 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
55. junbb ENSDARG00000104773 2536 1.687 - - - - - 0.739 0.948 - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
56. ino80c ENSDARG00000055719 1512 1.687 - - - - - - 0.974 - 0.713 INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
57. ston2 ENSDARG00000057452 2977 1.686 - 0.715 - - - - 0.971 - - stonin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-137]
58. cbsb ENSDARG00000010946 5779 1.686 - - - - - - 0.924 0.762 - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
59. cdon ENSDARG00000061328 1441 1.684 - - - - - 0.709 0.975 - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
60. pdcd11 ENSDARG00000052480 2791 1.682 - 0.705 - - 0.977 - - - - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
61. ndc1 ENSDARG00000021120 2417 1.682 - - - - 0.932 0.750 - - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
62. anxa4 ENSDARG00000036456 3332 1.677 - 0.750 - - - - 0.927 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
63. nmt1a ENSDARG00000052966 5918 1.677 - 0.790 - - - - - 0.887 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
64. prdx2 ENSDARG00000025350 11194 1.67 - - - - 0.806 - 0.864 - - peroxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
65. MAP4K4 ENSDARG00000098670 4665 1.659 - - - - - - 0.920 - 0.739 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
66. arf2 arf2 12369 1.659 - 0.708 - - 0.951 - - - -
67. hoxb3a ENSDARG00000029263 5493 1.655 - 0.723 - - 0.932 - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
68. zgc:100919 zgc:100919 7746 1.648 - - - - - - 0.874 0.774 -
69. snx27a ENSDARG00000033804 2249 1.645 - 0.797 - - - - - 0.848 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
70. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.634 - 0.731 - - 0.903 - - - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
71. nr2f6b ENSDARG00000003165 5855 1.632 - - - - 0.829 - - 0.803 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
72. arhgef2 ENSDARG00000075819 2173 1.628 - 0.888 - - - - - - 0.740 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
73. rhoaa ENSDARG00000026845 6900 1.624 - - - - - - 0.918 - 0.706 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
74. SRGAP3 ENSDARG00000060309 5353 1.622 - - - - - - 0.799 0.823 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
75. mcm4 ENSDARG00000040041 7971 1.615 - - - - 0.901 - - 0.714 - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
76. nop58 ENSDARG00000104353 8497 1.613 - - - - 0.888 - - - 0.725 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
77. lmnb2 ENSDARG00000101624 11304 1.612 - - - - - 0.892 - - 0.720 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
78. cdk12 ENSDARG00000063726 1220 1.608 - - - - 0.838 - - - 0.770 cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
79. plcg1 ENSDARG00000038442 5324 1.602 0.764 - - - 0.838 - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
80. lbr ENSDARG00000014013 4835 1.602 - 0.827 - - - - - - 0.775 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
81. zgc:101846 15202 1.601 - - - - - - 0.850 - 0.751 zgc:101846
82. ptenb ENSDARG00000056623 5783 1.601 - 0.759 - - 0.842 - - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
83. arpc5a ENSDARG00000039142 5482 1.598 - 0.725 - - - - - 0.873 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
84. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.597 - - - - - - 0.888 - 0.709 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
85. calr ENSDARG00000076290 13987 1.597 - - - - 0.882 0.715 - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
86. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.594 - - - - - 0.769 - 0.825 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
87. rnps1 ENSDARG00000116743 9994 1.591 - - - - - 0.842 - 0.749 - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
88. FP016176.1 FP016176.1 7030 1.583 - 0.712 - - 0.871 - - - -
89. atp6v1h ENSDARG00000006370 7028 1.582 - - - - - 0.717 - 0.865 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
90. si:ch73-46j18.5 ENSDARG00000092467 6002 1.579 - 0.728 - - 0.851 - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
91. pcbp2 ENSDARG00000099039 4248 1.575 - 0.768 - - - - 0.807 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
92. atad2b ENSDARG00000060537 3050 1.575 - 0.871 - - - 0.704 - - - ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
93. qars ENSDARG00000010316 2715 1.573 - 0.713 - - - - - 0.860 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
94. rab5if ENSDARG00000074790 8807 1.573 - 0.758 - - - - - 0.815 - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
95. eif2s3 ENSDARG00000008292 17051 1.57 - 0.746 - - - - 0.824 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
96. mcm5 ENSDARG00000019507 6407 1.569 - 0.785 - - - - - - 0.784 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
97. myh10 ENSDARG00000000103 7522 1.569 0.712 - - - 0.857 - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
98. tln1 ENSDARG00000100729 5744 1.567 - 0.716 - - - - 0.851 - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
99. igfbp1a ENSDARG00000099351 1717 1.566 - 0.706 - - - - - 0.860 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
100. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.565 - 0.780 - - - - - 0.785 -

There are 1310 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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